RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 NEPROQ6NW34 567 aa11.49□□□□□ -0.57
VWA3A-201ENST00000299840 CLP1Q92989 425 aaKnown RBP11.49□□□□□ -0.57
VWA3A-201ENST00000299840 GUCD1Q96NT3 240 aa11.49□□□□□ -0.57
VWA3A-201ENST00000299840 TGS1Q96RS0 853 aaKnown RBP11.49□□□□□ -0.57
VWA3A-201ENST00000299840 REEP2Q9BRK0 252 aa11.49□□□□□ -0.57
VWA3A-201ENST00000299840 TMEM117Q9H0C3 514 aa11.49□□□□□ -0.57
VWA3A-201ENST00000299840 ATAD3AQ9NVI7 634 aa11.49□□□□□ -0.57
VWA3A-201ENST00000299840 LARSQ9P2J5 1176 aaKnown RBP11.49□□□□□ -0.57
VWA3A-201ENST00000299840 RWDD3Q9Y3V2 267 aa11.49□□□□□ -0.57
VWA3A-201ENST00000299840 ZMYM2Q9UBW7 1377 aa11.49□□□□□ -0.57
VWA3A-201ENST00000299840 CITO14578 2027 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 PABPN1LA6NDY0 278 aaKnown RBP11.48□□□□□ -0.57
VWA3A-201ENST00000299840 H0YCG3 227 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 DIAPH2O60879 1101 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 KRT14P02533 472 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 PRKCBP05771 671 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 CMA1P23946 247 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 MTTPP55157 894 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 NCKAP1LP55160 1127 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 TUBB4BP68371 445 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 ADAM9Q13443 819 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 CFAP58Q5T655 872 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 CNNM4Q6P4Q7 775 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 Q7L0L9 218 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 LRRC43Q8N309 656 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 FIBCD1Q8N539 461 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 PGBD4Q96DM1 585 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 TRAPPC9Q96Q05 1148 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 GOLPH3LQ9H4A5 285 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 MAGEF1Q9HAY2 307 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 POLD4Q9HCU8 107 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 KMT5AQ9NQR1 393 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 MRGBPQ9NV56 204 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 ATG2AQ2TAZ0 1938 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 NPHP3-ACAD11A0A0J9YXS1 232 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 TUBBP07437 444 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 MAPTP10636 758 aaKnown RBP11.48□□□□□ -0.57
VWA3A-201ENST00000299840 POU3F3P20264 500 aaPredicted RBP11.48□□□□□ -0.57
VWA3A-201ENST00000299840 VARSP26640 1264 aaKnown RBP11.48□□□□□ -0.57
VWA3A-201ENST00000299840 SULT2A1Q06520 285 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 GRIN2CQ14957 1233 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 SEPT7Q16181 437 aaKnown RBP11.48□□□□□ -0.57
VWA3A-201ENST00000299840 CCDC153Q494R4 210 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 BOLA3Q53S33 107 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 GRAMD4Q6IC98 578 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 DNAJC19Q96DA6 116 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 KBTBD4Q9NVX7 518 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 PCDHB2Q9Y5E7 798 aa11.48□□□□□ -0.57
VWA3A-201ENST00000299840 PDCD11Q14690 1871 aaKnown RBP11.48□□□□□ -0.57
VWA3A-201ENST00000299840 A0A1W2PQ27 194 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 A0A1W2PQ64 194 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 A0A1W2PQD8 194 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 MYMKA6NI61 221 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 C5orf67F2Z3F1 127 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 K7ERI5 159 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 INPPL1O15357 1258 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 RB1P06400 928 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 S100A5P33763 92 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 SLC27A1Q6PCB7 646 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 TAS1R3Q7RTX0 852 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 GRAMD2AQ8IUY3 354 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 CHCHD4Q8N4Q1 142 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 SLC17A8Q8NDX2 589 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 TMEM161BQ8NDZ6 487 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.47□□□□□ -0.57
VWA3A-201ENST00000299840 CASD1Q96PB1 797 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 PNKPQ96T60 521 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 ST6GALNAC4Q9H4F1 302 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 PARVGQ9HBI0 331 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 UBN1Q9NPG3 1134 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 CCDC169A6NNP5 214 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 SFI1A8K8P3 1242 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 FANCGO15287 622 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 B4GALT5O43286 388 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 FAM13AO94988 1023 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 GAP43P17677 238 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 GEMIN4P57678 1058 aaKnown RBP11.47□□□□□ -0.57
VWA3A-201ENST00000299840 BCL2A1Q16548 175 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 CLLU1OSQ5K130 101 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 NT5DC1Q5TFE4 455 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 SMG8Q8ND04 991 aaKnown RBP11.47□□□□□ -0.57
VWA3A-201ENST00000299840 RNF25Q96BH1 459 aaPredicted RBP11.47□□□□□ -0.57
VWA3A-201ENST00000299840 CPB2Q96IY4 423 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 FIZ1Q96SL8 496 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 CDX2Q99626 313 aaPredicted RBP11.47□□□□□ -0.57
VWA3A-201ENST00000299840 CGREF1Q99674 301 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 BPIFA3Q9BQP9 254 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 KIFC3Q9BVG8 833 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 HPSEQ9Y251 543 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 TNFSF13BQ9Y275 285 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 PLXNA4Q9HCM2 1894 aa11.47□□□□□ -0.57
VWA3A-201ENST00000299840 LAMA3Q16787 3333 aa11.46□□□□□ -0.57
VWA3A-201ENST00000299840 DNAJC8O75937 253 aaPredicted RBP11.46□□□□□ -0.57
VWA3A-201ENST00000299840 EDN1P05305 212 aa11.46□□□□□ -0.57
VWA3A-201ENST00000299840 KRT18P05783 430 aaKnown RBP11.46□□□□□ -0.57
VWA3A-201ENST00000299840 ELF3P78545 371 aaPredicted RBP11.46□□□□□ -0.57
VWA3A-201ENST00000299840 RIPK1Q13546 671 aa11.46□□□□□ -0.57
VWA3A-201ENST00000299840 CAPN12Q6ZSI9 719 aa11.46□□□□□ -0.57
VWA3A-201ENST00000299840 OSTM1Q86WC4 334 aa11.46□□□□□ -0.57
VWA3A-201ENST00000299840 TMEM192Q8IY95 271 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms