RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 CASZ1Q86V15 1759 aa10.69□□□□□ -0.7
GABRB3-201ENST00000299267 H3BRJ5 948 aa10.69□□□□□ -0.7
GABRB3-201ENST00000299267 SLC1A1P43005 524 aa10.69□□□□□ -0.7
GABRB3-201ENST00000299267 YWHAHQ04917 246 aaPredicted RBP10.69□□□□□ -0.7
GABRB3-201ENST00000299267 SPIRE1Q08AE8 756 aa10.69□□□□□ -0.7
GABRB3-201ENST00000299267 BTG3Q14201 252 aaPredicted RBP10.69□□□□□ -0.7
GABRB3-201ENST00000299267 CCT6BQ92526 530 aa10.69□□□□□ -0.7
GABRB3-201ENST00000299267 SMC6Q96SB8 1091 aa10.69□□□□□ -0.7
GABRB3-201ENST00000299267 SYT15Q9BQS2 421 aa10.69□□□□□ -0.7
GABRB3-201ENST00000299267 COLEC11Q9BWP8 271 aa10.69□□□□□ -0.7
GABRB3-201ENST00000299267 CAPS2Q9BXY5 557 aa10.69□□□□□ -0.7
GABRB3-201ENST00000299267 TSPYL2Q9H2G4 693 aaPredicted RBP10.69□□□□□ -0.7
GABRB3-201ENST00000299267 FBXL5Q9UKA1 691 aa10.69□□□□□ -0.7
GABRB3-201ENST00000299267 TNFSF13BQ9Y275 285 aa10.69□□□□□ -0.7
GABRB3-201ENST00000299267 NID2Q14112 1375 aa10.69□□□□□ -0.7
GABRB3-201ENST00000299267 RCCD1A6NED2 376 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 ZBTB24O43167 697 aaPredicted RBP10.68□□□□□ -0.7
GABRB3-201ENST00000299267 GGCXP38435 758 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 CROCCP2Q86T23 111 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 CD302Q8IX05 232 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 LRRN4CLQ8ND94 238 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 OR2W6PQ8NHA6 318 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 WHAMMQ8TF30 809 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 SENP8Q96LD8 212 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 EPAS1Q99814 870 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 DHX33Q9H6R0 707 aaKnown RBP10.68□□□□□ -0.7
GABRB3-201ENST00000299267 TMEM134Q9H6X4 195 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 SP110Q9HB58 689 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 BARX2Q9UMQ3 279 aaPredicted RBP10.68□□□□□ -0.7
GABRB3-201ENST00000299267 DIS3Q9Y2L1 958 aaKnown RBP10.68□□□□□ -0.7
GABRB3-201ENST00000299267 FIS1Q9Y3D6 152 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 DUOX1Q9NRD9 1551 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 GRID2IPA4D2P6 1211 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 ENDOD1O94919 500 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 LYPLA2O95372 231 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 MT-ND3P03897 115 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 CA4P22748 312 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 BDNFP23560 247 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 ALDH3A1P30838 453 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 ZNF131P52739 623 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 TAP1Q03518 808 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 CUL1Q13616 776 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 THOC5Q13769 683 aaKnown RBP10.68□□□□□ -0.7
GABRB3-201ENST00000299267 EMBQ6PCB8 327 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 ZNF677Q86XU0 584 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 SRRM1Q8IYB3 904 aaKnown RBP10.68□□□□□ -0.7
GABRB3-201ENST00000299267 ATL2Q8NHH9 583 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 FAM172AQ8WUF8 416 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 DDX56Q9NY93 547 aaKnown RBP10.68□□□□□ -0.7
GABRB3-201ENST00000299267 FAM8A1Q9UBU6 413 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 CHD4Q14839 1912 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 GPR25O00155 361 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 ETFBP38117 255 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 TKTL1P51854 596 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 NCKAP1LP55160 1127 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 MRPS6P82932 125 aaKnown RBP10.68□□□□□ -0.7
GABRB3-201ENST00000299267 BIRC2Q13490 618 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 P3H1Q32P28 736 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 RCOR2Q8IZ40 523 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 VPS52Q8N1B4 723 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 FAM71DQ8N9W8 422 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 OR6P1Q8NGX9 317 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 EPS8L1Q8TE68 723 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 SLITRK1Q96PX8 696 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 MTIF3Q9H2K0 278 aaKnown RBP10.68□□□□□ -0.7
GABRB3-201ENST00000299267 SUDS3Q9H7L9 328 aaPredicted RBP10.68□□□□□ -0.7
GABRB3-201ENST00000299267 MAFBQ9Y5Q3 323 aaPredicted RBP10.68□□□□□ -0.7
GABRB3-201ENST00000299267 CNTNAP2Q9UHC6 1331 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 ALDH1A3P47895 512 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 ARL4CP56559 192 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 ADIGQ0VDE8 80 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 HELQQ8TDG4 1101 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 CFAP57Q96MR6 1250 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 UBN1Q9NPG3 1134 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 SMPD4Q9NXE4 827 aa10.68□□□□□ -0.7
GABRB3-201ENST00000299267 DMGDHQ9UI17 866 aaKnown RBP10.68□□□□□ -0.7
GABRB3-201ENST00000299267 NUP188Q5SRE5 1749 aa10.67□□□□□ -0.7
GABRB3-201ENST00000299267 PMLP29590 882 aa10.67□□□□□ -0.7
GABRB3-201ENST00000299267 BYSLQ13895 437 aaKnown RBP10.67□□□□□ -0.7
GABRB3-201ENST00000299267 SNX17Q15036 470 aa10.67□□□□□ -0.7
GABRB3-201ENST00000299267 ZACNQ401N2 412 aa10.67□□□□□ -0.7
GABRB3-201ENST00000299267 FYB2Q5VWT5 728 aa10.67□□□□□ -0.7
GABRB3-201ENST00000299267 FAM71BQ8TC56 605 aa10.67□□□□□ -0.7
GABRB3-201ENST00000299267 PPP4R1Q8TF05 950 aa10.67□□□□□ -0.7
GABRB3-201ENST00000299267 EXT2Q93063 718 aa10.67□□□□□ -0.7
GABRB3-201ENST00000299267 MED4Q9NPJ6 270 aa10.67□□□□□ -0.7
GABRB3-201ENST00000299267 TRMT13Q9NUP7 481 aaKnown RBP10.67□□□□□ -0.7
GABRB3-201ENST00000299267 CACNG4Q9UBN1 327 aa10.67□□□□□ -0.7
GABRB3-201ENST00000299267 ITGA11Q9UKX5 1188 aa10.67□□□□□ -0.7
GABRB3-201ENST00000299267 HPCAL4Q9UM19 191 aa10.67□□□□□ -0.7
GABRB3-201ENST00000299267 A0A0B4J269 797 aa10.67□□□□□ -0.7
GABRB3-201ENST00000299267 GOLGA8KD6RF30 607 aa10.67□□□□□ -0.7
GABRB3-201ENST00000299267 EEF2KO00418 725 aaKnown RBP10.67□□□□□ -0.7
GABRB3-201ENST00000299267 IGF2BP3O00425 579 aaKnown RBP eCLIP10.67□□□□□ -0.7
GABRB3-201ENST00000299267 STAMBPO95630 424 aa10.67□□□□□ -0.7
GABRB3-201ENST00000299267 GZMAP12544 262 aa10.67□□□□□ -0.7
GABRB3-201ENST00000299267 GCNT1Q02742 428 aa10.67□□□□□ -0.7
GABRB3-201ENST00000299267 EFEMP1Q12805 493 aa10.67□□□□□ -0.7
GABRB3-201ENST00000299267 PCSK7Q16549 785 aa10.67□□□□□ -0.7
GABRB3-201ENST00000299267 CLEC16AQ2KHT3 1053 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms