RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 KDM7AQ6ZMT4 941 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 C10orf67Q8IYJ2 551 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 BEST2Q8NFU1 509 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 PPM1EQ8WY54 764 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 DPF3Q92784 378 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 PBKQ96KB5 322 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 CALR3Q96L12 384 aaKnown RBP12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 TMEM161AQ9NX61 479 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 ITGA11Q9UKX5 1188 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 UBQLN1Q9UMX0 589 aaKnown RBP12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 DAAM1Q9Y4D1 1078 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 PCDHB7Q9Y5E2 793 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 SNX9Q9Y5X1 595 aa12.2□□□□□ -0.46
CHRNB3-201ENST00000289957 A0A0A6YYK5 440 aaPredicted RBP12.19□□□□□ -0.46
CHRNB3-201ENST00000289957 PALMO75781 387 aa12.19□□□□□ -0.46
CHRNB3-201ENST00000289957 WDR5P61964 334 aaKnown RBP12.19□□□□□ -0.46
CHRNB3-201ENST00000289957 PTK2Q05397 1052 aa12.19□□□□□ -0.46
CHRNB3-201ENST00000289957 ENPEPQ07075 957 aa12.19□□□□□ -0.46
CHRNB3-201ENST00000289957 IKBKEQ14164 716 aa12.19□□□□□ -0.46
CHRNB3-201ENST00000289957 WDR44Q5JSH3 913 aa12.19□□□□□ -0.46
CHRNB3-201ENST00000289957 LRIG3Q6UXM1 1119 aa12.19□□□□□ -0.46
CHRNB3-201ENST00000289957 SPRED2Q7Z698 418 aa12.19□□□□□ -0.46
CHRNB3-201ENST00000289957 SPATS2Q86XZ4 545 aaKnown RBP12.19□□□□□ -0.46
CHRNB3-201ENST00000289957 IQCKQ8N0W5 287 aa12.19□□□□□ -0.46
CHRNB3-201ENST00000289957 B3GALT6Q96L58 329 aa12.19□□□□□ -0.46
CHRNB3-201ENST00000289957 ZSWIM1Q9BR11 485 aa12.19□□□□□ -0.46
CHRNB3-201ENST00000289957 MRPL45Q9BRJ2 306 aaKnown RBP12.19□□□□□ -0.46
CHRNB3-201ENST00000289957 STK33Q9BYT3 514 aa12.19□□□□□ -0.46
CHRNB3-201ENST00000289957 RSPH14Q9UHP6 348 aa12.19□□□□□ -0.46
CHRNB3-201ENST00000289957 INTUQ9ULD6 942 aa12.19□□□□□ -0.46
CHRNB3-201ENST00000289957 PRG3Q9Y2Y8 225 aaPredicted RBP12.19□□□□□ -0.46
CHRNB3-201ENST00000289957 TRANK1O15050 2925 aa12.19□□□□□ -0.46
CHRNB3-201ENST00000289957 TBKBP1A7MCY6 615 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 PODXLO00592 558 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 TRIM66O15016 1216 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 HEXIM1O94992 359 aaKnown RBP12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 KIF4AO95239 1232 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 KRT5P13647 590 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 HSPA9P38646 679 aaKnown RBP12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 LILRA4P59901 499 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 UPP1Q16831 310 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 SGSM1Q2NKQ1 1148 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 TTMPQ5BVD1 217 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 NOMO2Q5JPE7 1267 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 TMEM270Q6UE05 265 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 GLB1LQ6UWU2 654 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 ZNF571Q7Z3V5 609 aaPredicted RBP12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 ACTRT1Q8TDG2 376 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 SHC3Q92529 594 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 A0A087WUV0 522 aaPredicted RBP12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 ZBBXA8MT70 800 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 ZC3H11AO75152 810 aaKnown RBP eCLIP12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 EOMESO95936 686 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 SOX5P35711 763 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 RBP5P82980 135 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 KLHL30Q0D2K2 578 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 SOWAHAQ2M3V2 549 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 TMEM199Q8N511 208 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 BCL7CQ8WUZ0 217 aaPredicted RBP12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 APBB2Q92870 758 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 PGBD4Q96DM1 585 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 ZIM3Q96PE6 472 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 NIF3L1Q9GZT8 377 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 CISHQ9NSE2 258 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 DERAQ9Y315 318 aa12.18□□□□□ -0.46
CHRNB3-201ENST00000289957 BUB1O43683 1085 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 B3GAT3O94766 335 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 LMO2P25791 158 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 AP3M2P53677 418 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 POU5F1Q01860 360 aaKnown RBP12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 GCNT1Q02742 428 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 ZNF667Q5HYK9 610 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 TMEM240Q5SV17 173 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 FAM109BQ6ICB4 259 aaPredicted RBP12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 NOP9Q86U38 636 aaKnown RBP12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 UBR7Q8N806 425 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 GDAP1L1Q96MZ0 367 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 DPEP3Q9H4B8 488 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 NRDE2Q9H7Z3 1164 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 IL23AQ9NPF7 189 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 EHD2Q9NZN4 543 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 PRKAG2Q9UGJ0 569 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 LRFN2Q9ULH4 789 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 A0A087X0T9 212 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 FAM228BP0C875 321 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 CXCR5P32302 372 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 OR1G1P47890 313 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 SLC7A5Q01650 507 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 RNASELQ05823 741 aaKnown RBP12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 FPGSQ05932 587 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 DSC1Q08554 894 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 CUL1Q13616 776 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 TIGD5Q53EQ6 642 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 C9orf50Q5SZB4 431 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 CFAP58Q5T655 872 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 COLGALT2Q8IYK4 626 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 FAM71AQ8IYT1 594 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 HACE1Q8IYU2 909 aa12.17□□□□□ -0.46
CHRNB3-201ENST00000289957 TNS4Q8IZW8 715 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms