RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 TRIM72Q6ZMU5 477 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 PLEKHH3Q7Z736 793 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 RFX6Q8HWS3 928 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 ANKMY2Q8IV38 441 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 MREGQ8N565 214 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 KCTD6Q8NC69 237 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 MS4A4AQ96JQ5 239 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 C16orf70Q9BSU1 422 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 B3GNT5Q9BYG0 378 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 TUBGCP4Q9UGJ1 667 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 PCYOX1Q9UHG3 505 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 TNFSF13BQ9Y275 285 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 E5RJQ4 531 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 H0YGN5 161 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 FSCN2O14926 492 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 MTA2O94776 668 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 MICAL2O94851 1124 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 ERBB2P04626 1255 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 MDH1P40925 334 aaKnown RBP6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 SLC1A1P43005 524 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 GCLCP48506 637 aaPredicted RBP6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 SLC26A2P50443 739 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 RAD23BP54727 409 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 C1QBPQ07021 282 aaKnown RBP6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 MMRN1Q13201 1228 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 ZKSCAN8Q15776 578 aaPredicted RBP6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 ZNF792Q3KQV3 632 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 ILDR2Q71H61 639 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 CPLX4Q7Z7G2 160 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 PNMA8AQ86V59 439 aaPredicted RBP6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 SCUBE3Q8IX30 993 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 ATL2Q8NHH9 583 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 GDAP1Q8TB36 358 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 MORC4Q8TE76 937 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 VPS37BQ9H9H4 285 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 SAYSD1Q9NPB0 183 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 TSPAN16Q9UKR8 245 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 HEY1Q9Y5J3 304 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 NFS1Q9Y697 457 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 MRPL42Q9Y6G3 142 aaKnown RBP6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 GRIN2DO15399 1336 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 DOCK3Q8IZD9 2030 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 TMEM191CA6NGB0 347 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 MEFVO15553 781 aaPredicted RBP6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 GAS2O43903 313 aaKnown RBP6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 TSPAN1O60635 241 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 RNF8O76064 485 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 MMP3P08254 477 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 VIMP08670 466 aaKnown RBP6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 C6orf222P0C671 652 aaPredicted RBP6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 PDGFRAP16234 1089 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 IL1R2P27930 398 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 PPP2R2AP63151 447 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 IFT88Q13099 833 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 BYSLQ13895 437 aaKnown RBP6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 SURF1Q15526 300 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 ZNF484Q5JVG2 852 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 C1orf228Q6PIY5 440 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 HOOK3Q86VS8 718 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 PHF13Q86YI8 300 aaPredicted RBP6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 PPTC7Q8NI37 304 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 TMEM174Q8WUU8 243 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 THOC1Q96FV9 657 aaKnown RBP6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 SNF8Q96H20 258 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 TMEM176AQ96HP8 235 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 RNF39Q9H2S5 420 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 PTPRHQ9HD43 1115 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 NMRK2Q9NPI5 230 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 GGT7Q9UJ14 662 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 BRCA1P38398 1863 aaKnown RBP6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 A8MXQ7 604 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 MYO1CO00159 1063 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 MAGEB2O15479 319 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 TREHO43280 583 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 RIPK2O43353 540 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 B4GALT4O60513 344 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 PPFIA2O75334 1257 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 ITGBL1O95965 494 aaPredicted RBP6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 RARBP10826 455 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 LCP1P13796 627 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 FNTAP49354 379 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 AP3M2P53677 418 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 CDH6P55285 790 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 BASP1P80723 227 aaKnown RBP6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 GAD2Q05329 585 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 PTP4A2Q12974 167 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 FASTKD3Q14CZ7 662 aaKnown RBP6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 GOLGA7BQ2TAP0 167 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 PAN2Q504Q3 1202 aaKnown RBP6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 FAXCQ5TGI0 409 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 TWF2Q6IBS0 349 aaKnown RBP6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 NPNTQ6UXI9 565 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 TLK2Q86UE8 772 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 SRRM1Q8IYB3 904 aaKnown RBP6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 EXOC8Q8IYI6 725 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 ARFGAP2Q8N6H7 521 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 CCDC89Q8N998 374 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 SLC4A11Q8NBS3 891 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 ACTL9Q8TC94 416 aa6.37□□□□□ -1.39
TNFSF4-201ENST00000281834 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms