RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 HEMGNQ9BXL5 484 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 KLK14Q9P0G3 267 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 UBQLN1Q9UMX0 589 aaKnown RBP10.14□□□□□ -0.79
TRIM55-201ENST00000276573 SNX24Q9Y343 169 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 SNX9Q9Y5X1 595 aa10.14□□□□□ -0.79
TRIM55-201ENST00000276573 TRIP12Q14669 1992 aaPredicted RBP10.13□□□□□ -0.79
TRIM55-201ENST00000276573 PIRO00625 290 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 ALDH1A1P00352 501 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 CD4P01730 458 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 ERBB2P04626 1255 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 RALAP11233 206 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 KCNE1P15382 129 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 TCF4P15884 667 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 CYP3A5P20815 502 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 CETN2P41208 172 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 NKX3-2P78367 333 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 KLF1Q13351 362 aaPredicted RBP10.13□□□□□ -0.79
TRIM55-201ENST00000276573 STILQ15468 1287 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 NBPF20Q3BBV1 942 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 GLRA4Q5JXX5 417 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 CCDC50Q8IVM0 306 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 JOSD2Q8TAC2 188 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 UBA3Q8TBC4 463 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 SLCO2A1Q92959 643 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 RNF25Q96BH1 459 aaPredicted RBP10.13□□□□□ -0.79
TRIM55-201ENST00000276573 MCRS1Q96EZ8 462 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 OSBPL8Q9BZF1 889 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 DCLK3Q9C098 648 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 SPC25Q9HBM1 224 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 ZDHHC18Q9NUE0 388 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 RNF19AQ9NV58 838 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 PARP2Q9UGN5 583 aa10.13□□□□□ -0.79
TRIM55-201ENST00000276573 TMEM88BA6NKF7 163 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 GOLGA8KD6RF30 607 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 M0QYV0 167 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 XPOTO43592 962 aaKnown RBP10.12□□□□□ -0.79
TRIM55-201ENST00000276573 PGK1P00558 417 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 GBP1P32455 592 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 GJC1P36383 396 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 HSD17B3P37058 310 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 RPL21P46778 160 aaKnown RBP10.12□□□□□ -0.79
TRIM55-201ENST00000276573 MRPS6P82932 125 aaKnown RBP10.12□□□□□ -0.79
TRIM55-201ENST00000276573 NFX1Q12986 1120 aaKnown RBP10.12□□□□□ -0.79
TRIM55-201ENST00000276573 SNX1Q13596 522 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 CCNG2Q16589 344 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 ZDHHC24Q6UX98 284 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 CXCL17Q6UXB2 119 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 DPH6Q7L8W6 267 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 ANKS1BQ7Z6G8 1248 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 FAM228AQ86W67 206 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 SMG8Q8ND04 991 aaKnown RBP10.12□□□□□ -0.79
TRIM55-201ENST00000276573 FNIP1Q8TF40 1166 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 EXOC4Q96A65 974 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 RUFY1Q96T51 708 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 SYNCQ9H7C4 482 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 CHST7Q9NS84 486 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 HOMER3Q9NSC5 361 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 GRHL1Q9NZI5 618 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 GTF2IRD1Q9UHL9 959 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 FEZ2Q9UHY8 353 aaPredicted RBP10.12□□□□□ -0.79
TRIM55-201ENST00000276573 R3HDM2Q9Y2K5 976 aaKnown RBP10.12□□□□□ -0.79
TRIM55-201ENST00000276573 IPPQ9Y573 584 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 TRIP11Q15643 1979 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 PI4K2BG5E9Z4 385 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 SEPT4O43236 478 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 ECEL1O95672 775 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 PFKMP08237 780 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 ATF7P17544 494 aaPredicted RBP10.12□□□□□ -0.79
TRIM55-201ENST00000276573 PSMA2P25787 234 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 PLTPP55058 493 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 COPS2P61201 443 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 DHX9Q08211 1270 aaKnown RBP10.12□□□□□ -0.79
TRIM55-201ENST00000276573 CACNB2Q08289 660 aaPredicted RBP10.12□□□□□ -0.79
TRIM55-201ENST00000276573 TRIM32Q13049 653 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 PDCLQ13371 301 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 UAP1Q16222 522 aaPredicted RBP10.12□□□□□ -0.79
TRIM55-201ENST00000276573 SOWAHAQ2M3V2 549 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 TXNRD3NBQ6F5E7 133 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 GDF6Q6KF10 455 aaPredicted RBP10.12□□□□□ -0.79
TRIM55-201ENST00000276573 CYP4F22Q6NT55 531 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 MFSD7Q6UXD7 560 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 LRIG3Q6UXM1 1119 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 SYDE1Q6ZW31 735 aaPredicted RBP10.12□□□□□ -0.79
TRIM55-201ENST00000276573 ACOT1Q86TX2 421 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 UNC93AQ86WB7 457 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 ARFGAP1Q8N6T3 406 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 GOLGA6L1Q8N7Z2 621 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 C12orf29Q8N999 325 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 ARRDC4Q8NCT1 418 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 ATL2Q8NHH9 583 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 RBM41Q96IZ5 413 aaKnown RBP10.12□□□□□ -0.79
TRIM55-201ENST00000276573 FMO2Q99518 471 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 TXLNGYQ9BZA5 131 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 DDX56Q9NY93 547 aaKnown RBP10.12□□□□□ -0.79
TRIM55-201ENST00000276573 PSD3Q9NYI0 1048 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 TSPAN16Q9UKR8 245 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 PLAAQ9Y263 795 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 NME7Q9Y5B8 376 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 TRPV2Q9Y5S1 764 aa10.12□□□□□ -0.79
TRIM55-201ENST00000276573 CDY2AQ9Y6F7 541 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms