RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 CACNA2D1P54289 1103 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 ITGA1P56199 1179 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 DNAJC3Q13217 504 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 C16orf72Q14CZ0 275 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 SMARCAD1Q9H4L7 1026 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 GJB4Q9NTQ9 266 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 TMEM260Q9NX78 707 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 CLCA2Q9UQC9 943 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 ZDHHC9Q9Y397 364 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 SNX13Q9Y5W8 968 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 HEG1Q9ULI3 1381 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 KIF28PB7ZC32 967 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 ATP6V1G2O95670 118 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 IZUMO2Q6UXV1 221 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 ZCCHC7Q8N3Z6 543 aaKnown RBP9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 SEPT1Q8WYJ6 367 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 TSR3Q9UJK0 312 aaKnown RBP9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 SOAT1P35610 550 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 PPP3CCP48454 512 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 PRIM2P49643 509 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 FXR1P51114 621 aaKnown RBP eCLIP9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 OSCP1Q8WVF1 389 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 RNPEPQ9H4A4 650 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 ENOPH1Q9UHY7 261 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 FOXN1O15353 648 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 ANXA9O76027 345 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 PTRHD1Q6GMV3 140 aaKnown RBP9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 LAYNQ6UX15 382 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 LPCAT2Q7L5N7 544 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 OR8H2Q8N162 312 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 SH3RF3Q8TEJ3 882 aaPredicted RBP9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 MCEEQ96PE7 176 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 THUMPD3Q9BV44 507 aaKnown RBP9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 ARHGEF3Q9NR81 526 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 WHRNQ9P202 907 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 LRCH1Q9Y2L9 728 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 PLEKHG2Q9H7P9 1386 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 SYNMO15061 1565 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 TIMM44O43615 452 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 ATP9AO75110 1047 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 AKT1P31749 480 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 MAGEA10P43363 369 aaPredicted RBP9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 TAB1Q15750 504 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 APOL4Q9BPW4 351 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 SERHL2Q9H4I8 314 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 IL1RL2Q9HB29 575 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 SERHLQ9NQF3 203 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 RNF146Q9NTX7 359 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 ALG6Q9Y672 507 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 CFAP43Q8NDM7 1665 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 CTTNBP2Q8WZ74 1663 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 HEATR9A2RTY3 570 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 DGAT1O75907 488 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 PRKCBP05771 671 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 GPD1P21695 349 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 PTGER2P43116 358 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 RXRGP48443 463 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 COX10Q12887 443 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 C12orf60Q5U649 245 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 TRIQKQ629K1 86 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 SLC13A5Q86YT5 568 aaPredicted RBP9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 SPRTNQ9H040 489 aaPredicted RBP9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 DBNDD1Q9H9R9 158 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 KLHL11Q9NVR0 708 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 CYP39A1Q9NYL5 469 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 UBA2Q9UBT2 640 aaPredicted RBP9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 HAO1Q9UJM8 370 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 LSM7Q9UK45 103 aaKnown RBP9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 SNPHO15079 494 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 ZCCHC18P0CG32 403 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 PIK3R1P27986 724 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 SMAD1Q15797 465 aaKnown RBP9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 TTLL9Q3SXZ7 439 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 HEATR4Q86WZ0 1026 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 CYP4Z2PQ8N1L4 340 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 AGAP3Q96P47 875 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 KLF6Q99612 283 aaPredicted RBP9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 SLC7A5P2Q9GIP4 190 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 RXFP1Q9HBX9 757 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 USP21Q9UK80 565 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 GTF3C4Q9UKN8 822 aa9.05□□□□□ -0.96
SCUBE3-201ENST00000274938 PP2D1A8MPX8 630 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 TM9SF1O15321 606 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 IL18RAPO95256 599 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 TNFAIP8O95379 198 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 TDP2O95551 362 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 FMR1Q06787 632 aaKnown RBP eCLIP9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 MAPK7Q13164 816 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 SLC9A5Q14940 896 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 QRICH1Q2TAL8 776 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 IRGCQ6NXR0 463 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 ZBTB49Q6ZSB9 765 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 SPATA18Q8TC71 538 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 ERGIC2Q96RQ1 377 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 LBHD1Q9BQE6 289 aaPredicted RBP9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 FUT8Q9BYC5 575 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 UBXN6Q9BZV1 441 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 CEP44Q9C0F1 390 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 VTA1Q9NP79 307 aa9.04□□□□□ -0.96
SCUBE3-201ENST00000274938 SLC24A2Q9UI40 661 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms