RNA–Protein interactions for RNA: ENST00000269886.7

SH3GL1-201, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL1, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-201ENST00000269886 PRCCQ92733 491 aaPredicted RBP25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 DDX56Q9NY93 547 aaKnown RBP25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 GRID1Q9ULK0 1009 aa25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 C3orf70A6NLC5 250 aaPredicted RBP25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 EIF4BP23588 611 aaKnown RBP25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 PTPN7P35236 360 aa25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 ASPAP45381 313 aa25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 GDF10P55107 478 aa25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 LAMTOR4Q0VGL1 99 aa25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 LY6KQ17RY6 165 aa25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 PTPN20Q4JDL3 420 aa25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 TRIM50Q86XT4 487 aa25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 TDRPQ86YL5 185 aa25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 THNSL1Q8IYQ7 743 aa25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 TMEM130Q8N3G9 435 aa25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 ARFGAP1Q8N6T3 406 aa25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 CHST13Q8NET6 341 aa25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 DENND1AQ8TEH3 1009 aa25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 ZNF518BQ9C0D4 1074 aa25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 YY1AP1Q9H869 796 aa25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 NXF1Q9UBU9 619 aaKnown RBP25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 CYTH4Q9UIA0 394 aa25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 CPSF3Q9UKF6 684 aaKnown RBP25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 POLIQ9UNA4 740 aa25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 AGTPBP1Q9UPW5 1226 aa25.33■■□□□ 1.65
SH3GL1-201ENST00000269886 PRKCBP05771 671 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 PSMA2P25787 234 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 IL1R2P27930 398 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 CDH5P33151 784 aaPredicted RBP25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 EFNA5P52803 228 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 CENPUQ71F23 418 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 NIPA2Q8N8Q9 360 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 SLC35B2Q8TB61 432 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 NCAPGQ9BPX3 1015 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 PLCD4Q9BRC7 762 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 XYLT2Q9H1B5 865 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 PCDH9Q9HC56 1237 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 A0A1W2PPM1 405 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 ABLIM1O14639 778 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 PIAS1O75925 651 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 HOXC6P09630 235 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 SLC8A1P32418 973 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 RPA3P35244 121 aaPredicted RBP25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 RAP1GAPP47736 663 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 NR1H3Q13133 447 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 GRM1Q13255 1194 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 TREML2Q5T2D2 321 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 FAM160B1Q5W0V3 765 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 KIAA0319LQ8IZA0 1049 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 SLCO1B3Q9NPD5 702 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 PCDHGC3Q9UN70 934 aa25.32■■□□□ 1.64
SH3GL1-201ENST00000269886 SOWAHBA6NEL2 793 aa25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 CD19P15391 556 aa25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 HIRAP54198 1017 aaPredicted RBP25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 OTUD4Q01804 1114 aaKnown RBP25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 TAP1Q03518 808 aa25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 ORC1Q13415 861 aa25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 MTM1Q13496 603 aa25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 ZNF268Q14587 947 aaPredicted RBP25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 CEP120Q8N960 986 aa25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 ACTL9Q8TC94 416 aa25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 BTBD7Q9P203 1132 aa25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 PPP1R1BQ9UD71 204 aaPredicted RBP25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 SHOC2Q9UQ13 582 aa25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 CEP83Q9Y592 693 aa25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 KRT16P08779 473 aa25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 GPX6P59796 221 aa25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 SLC25A11Q02978 314 aaKnown RBP25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 MAPK6Q16659 721 aa25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 ANKRD22Q5VYY1 191 aa25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 RNF43Q68DV7 783 aa25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 SMC6Q96SB8 1091 aa25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 UBN1Q9NPG3 1134 aa25.31■■□□□ 1.64
SH3GL1-201ENST00000269886 LRCH4O75427 683 aa25.3■■□□□ 1.64
SH3GL1-201ENST00000269886 GJB1P08034 283 aa25.3■■□□□ 1.64
SH3GL1-201ENST00000269886 KRT3P12035 628 aa25.3■■□□□ 1.64
SH3GL1-201ENST00000269886 LACTBP83111 547 aaPredicted RBP25.3■■□□□ 1.64
SH3GL1-201ENST00000269886 RIPK1Q13546 671 aa25.3■■□□□ 1.64
SH3GL1-201ENST00000269886 EMC1Q8N766 993 aa25.3■■□□□ 1.64
SH3GL1-201ENST00000269886 SEPT1Q8WYJ6 367 aa25.3■■□□□ 1.64
SH3GL1-201ENST00000269886 PRPF4O43172 522 aaKnown RBP eCLIP25.3■■□□□ 1.646e-6■■■■□ 20.1
SH3GL1-201ENST00000269886 CST8O60676 142 aa25.3■■□□□ 1.64
SH3GL1-201ENST00000269886 CD48P09326 243 aa25.3■■□□□ 1.64
SH3GL1-201ENST00000269886 CTCFP49711 727 aaPredicted RBP25.3■■□□□ 1.64
SH3GL1-201ENST00000269886 TRPM4Q8TD43 1214 aa25.3■■□□□ 1.64
SH3GL1-201ENST00000269886 GRAMD1AQ96CP6 724 aa25.3■■□□□ 1.64
SH3GL1-201ENST00000269886 MCM8Q9UJA3 840 aa25.3■■□□□ 1.64
SH3GL1-201ENST00000269886 PHTF1Q9UMS5 762 aa25.3■■□□□ 1.64
SH3GL1-201ENST00000269886 FARP1Q9Y4F1 1045 aaPredicted RBP25.3■■□□□ 1.64
SH3GL1-201ENST00000269886 A8MUI8 341 aa25.29■■□□□ 1.64
SH3GL1-201ENST00000269886 CA4P22748 312 aa25.29■■□□□ 1.64
SH3GL1-201ENST00000269886 SPARCL1Q14515 664 aa25.29■■□□□ 1.64
SH3GL1-201ENST00000269886 EFTUD2Q15029 972 aaKnown RBP eCLIP25.29■■□□□ 1.643e-8■■■■■ 34.7
SH3GL1-201ENST00000269886 SLC1A5Q15758 541 aa25.29■■□□□ 1.64
SH3GL1-201ENST00000269886 HIF1AQ16665 826 aa25.29■■□□□ 1.64
SH3GL1-201ENST00000269886 MSS51Q4VC12 460 aa25.29■■□□□ 1.64
SH3GL1-201ENST00000269886 IER5Q5VY09 327 aa25.29■■□□□ 1.64
SH3GL1-201ENST00000269886 CDCA2Q69YH5 1023 aaPredicted RBP25.29■■□□□ 1.64
SH3GL1-201ENST00000269886 GPATCH11Q8N954 259 aa25.29■■□□□ 1.64
SH3GL1-201ENST00000269886 STK38LQ9Y2H1 464 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms