RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 BAP1Q92560 729 aa20.02■□□□□ 0.8
COL4A3BP-201ENST00000261415 SEMA4DQ92854 862 aa20.02■□□□□ 0.8
COL4A3BP-201ENST00000261415 PLEKHG4BQ96PX9 1271 aa20.02■□□□□ 0.8
COL4A3BP-201ENST00000261415 CHST12Q9NRB3 414 aa20.02■□□□□ 0.8
COL4A3BP-201ENST00000261415 PCDHGA4Q9Y5G9 962 aa20.02■□□□□ 0.8
COL4A3BP-201ENST00000261415 AP3M2P53677 418 aa20.02■□□□□ 0.8
COL4A3BP-201ENST00000261415 BFSP2Q13515 415 aa20.02■□□□□ 0.8
COL4A3BP-201ENST00000261415 ITIH4Q14624 930 aa20.02■□□□□ 0.8
COL4A3BP-201ENST00000261415 MBTPS1Q14703 1052 aa20.02■□□□□ 0.8
COL4A3BP-201ENST00000261415 MTMR12Q9C0I1 747 aa20.02■□□□□ 0.8
COL4A3BP-201ENST00000261415 ASB7Q9H672 318 aa20.02■□□□□ 0.8
COL4A3BP-201ENST00000261415 RAB20Q9NX57 234 aa20.02■□□□□ 0.8
COL4A3BP-201ENST00000261415 RNF14Q9UBS8 474 aa20.02■□□□□ 0.8
COL4A3BP-201ENST00000261415 APEX2Q9UBZ4 518 aa20.02■□□□□ 0.8
COL4A3BP-201ENST00000261415 FBXL5Q9UKA1 691 aa20.02■□□□□ 0.8
COL4A3BP-201ENST00000261415 HYOU1Q9Y4L1 999 aa20.02■□□□□ 0.8
COL4A3BP-201ENST00000261415 TLR3O15455 904 aaKnown RBP20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 ZSCAN9O15535 394 aaPredicted RBP20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 MXRA7P84157 204 aa20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 LBRQ14739 615 aaKnown RBP20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 LRRC8DQ7L1W4 858 aa20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 TEKT4Q8WW24 435 aa20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 IPPQ9Y573 584 aa20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 NFICP08651 508 aa20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 FAM163BP0C2L3 166 aa20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 ALDH3A1P30838 453 aa20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 PPP2R2AP63151 447 aa20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 TFAMQ00059 246 aaKnown RBP20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 ANKRD20A2Q5SQ80 823 aa20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 ANKRD20A1Q5TYW2 823 aa20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 C1orf53Q5VUE5 145 aa20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 ANKRD20A3Q5VUR7 823 aa20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 GJB7Q6PEY0 223 aa20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 ATL2Q8NHH9 583 aa20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 RAPGEF5Q92565 580 aa20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 AJAP1Q9UKB5 411 aaPredicted RBP20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 NFU1Q9UMS0 254 aa20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 PLAAQ9Y263 795 aa20.01■□□□□ 0.79
COL4A3BP-201ENST00000261415 SCN1AP35498 2009 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 SELPP16109 830 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 CDC25CP30307 473 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 HSPA9P38646 679 aaKnown RBP20■□□□□ 0.79
COL4A3BP-201ENST00000261415 DUOXA2Q1HG44 320 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 TRIM60Q495X7 471 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 JADE1Q6IE81 842 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 PHLDB3Q6NSJ2 640 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 RRAGAQ7L523 313 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 TBC1D1Q86TI0 1168 aaPredicted RBP20■□□□□ 0.79
COL4A3BP-201ENST00000261415 EIF1ADQ8N9N8 165 aaKnown RBP20■□□□□ 0.79
COL4A3BP-201ENST00000261415 SMG8Q8ND04 991 aaKnown RBP20■□□□□ 0.79
COL4A3BP-201ENST00000261415 NAF1Q96HR8 494 aaKnown RBP20■□□□□ 0.79
COL4A3BP-201ENST00000261415 TMEM106CQ9BVX2 250 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 APOL6Q9BWW8 343 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 ZNHIT6Q9NWK9 470 aaKnown RBP20■□□□□ 0.79
COL4A3BP-201ENST00000261415 LRRC53A6NM62 1247 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 PITPNM1O00562 1244 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 RECQL4O94761 1208 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 VNN1O95497 513 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 HLA-DRAP01903 254 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 TMEM191BP0C7N4 346 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 ATP2A2P16615 1042 aaKnown RBP20■□□□□ 0.79
COL4A3BP-201ENST00000261415 DRD4P21917 467 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 PIK3CAP42336 1068 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 ABL2P42684 1182 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 YARSP54577 528 aaKnown RBP20■□□□□ 0.79
COL4A3BP-201ENST00000261415 MEA1Q16626 185 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 SGSM1Q2NKQ1 1148 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 AGBL2Q5U5Z8 902 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 LMNTD2Q8IXW0 634 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 MIPOL1Q8TD10 442 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 SNX27Q96L92 541 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 TRIM4Q9C037 500 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 MCOLN1Q9GZU1 580 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 FAM105AQ9NUU6 356 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 WDR35Q9P2L0 1181 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 ASB3Q9Y575 518 aa20■□□□□ 0.79
COL4A3BP-201ENST00000261415 AKAP5P24588 427 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 CARSP49589 748 aaKnown RBP19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 PDXDC1Q6P996 788 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 CHMP6Q96FZ7 201 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 ANKRD36BP1Q96IX9 119 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 PAWRQ96IZ0 340 aaKnown RBP19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 TOX2Q96NM4 488 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 LACRTQ9GZZ8 138 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 C11orf49Q9H6J7 331 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 CNOT10Q9H9A5 744 aaKnown RBP19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 PLEKHA5Q9HAU0 1116 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.99■□□□□ 0.796e-10■■■■■ 49.7
COL4A3BP-201ENST00000261415 PCDHB2Q9Y5E7 798 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 DPPA5A6NC42 116 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 DCDC2CA8MYV0 355 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 MGEA5O60502 916 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 TLE2Q04725 743 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 TAF11Q15544 211 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 ODF2Q5BJF6 829 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 NUGGCQ68CJ6 796 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 ARHGEF19Q8IW93 802 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 CENPTQ96BT3 561 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 CXCL16Q9H2A7 254 aa19.99■□□□□ 0.79
COL4A3BP-201ENST00000261415 BLOC1S6Q9UL45 172 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms