RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 LRRC45Q96CN5 670 aa18.39■□□□□ 0.53
VRK1-201ENST00000216639 TRIM51Q9BSJ1 452 aa18.39■□□□□ 0.53
VRK1-201ENST00000216639 CXCL16Q9H2A7 254 aa18.39■□□□□ 0.53
VRK1-201ENST00000216639 ST7Q9NRC1 585 aa18.39■□□□□ 0.53
VRK1-201ENST00000216639 PIRO00625 290 aa18.38■□□□□ 0.53
VRK1-201ENST00000216639 ADAMTS4O75173 837 aa18.38■□□□□ 0.53
VRK1-201ENST00000216639 RPS6KA5O75582 802 aa18.38■□□□□ 0.53
VRK1-201ENST00000216639 FAM153BP0C7A2 387 aa18.38■□□□□ 0.53
VRK1-201ENST00000216639 GPD2P43304 727 aa18.38■□□□□ 0.53
VRK1-201ENST00000216639 GABRB2P47870 512 aa18.38■□□□□ 0.53
VRK1-201ENST00000216639 DRG2P55039 364 aaKnown RBP18.38■□□□□ 0.53
VRK1-201ENST00000216639 PDCLQ13371 301 aa18.38■□□□□ 0.53
VRK1-201ENST00000216639 SIX1Q15475 284 aaPredicted RBP18.38■□□□□ 0.53
VRK1-201ENST00000216639 TRADDQ15628 312 aa18.38■□□□□ 0.53
VRK1-201ENST00000216639 FAM153CQ494X1 144 aa18.38■□□□□ 0.53
VRK1-201ENST00000216639 ZFYVE27Q5T4F4 411 aa18.38■□□□□ 0.53
VRK1-201ENST00000216639 GDF6Q6KF10 455 aaPredicted RBP18.38■□□□□ 0.53
VRK1-201ENST00000216639 SESTD1Q86VW0 696 aa18.38■□□□□ 0.53
VRK1-201ENST00000216639 CPXM1Q96SM3 734 aa18.38■□□□□ 0.53
VRK1-201ENST00000216639 DPH5Q9H2P9 285 aa18.38■□□□□ 0.53
VRK1-201ENST00000216639 CHST12Q9NRB3 414 aa18.38■□□□□ 0.53
VRK1-201ENST00000216639 DDX56Q9NY93 547 aaKnown RBP18.38■□□□□ 0.53
VRK1-201ENST00000216639 KLK14Q9P0G3 267 aa18.38■□□□□ 0.53
VRK1-201ENST00000216639 FAM153AQ9UHL3 310 aa18.38■□□□□ 0.53
VRK1-201ENST00000216639 FEZ2Q9UHY8 353 aaPredicted RBP18.38■□□□□ 0.53
VRK1-201ENST00000216639 CYTH4Q9UIA0 394 aa18.38■□□□□ 0.53
VRK1-201ENST00000216639 CASP8AP2Q9UKL3 1982 aa18.38■□□□□ 0.53
VRK1-201ENST00000216639 SCN10AQ9Y5Y9 1956 aa18.38■□□□□ 0.53
VRK1-201ENST00000216639 TCRBV7S2A1N4TA0A589 114 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 OPA1O60313 960 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 PSMA2P25787 234 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 HOXD10P28358 340 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 GJC1P36383 396 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 PTGIRP43119 386 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 SNX16P57768 344 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 FAM193AP78312 1265 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 SV2CQ496J9 727 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 DUPD1Q68J44 220 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 RPAINQ86UA6 219 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 SERINC5Q86VE9 423 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 DDX42Q86XP3 938 aaKnown RBP eCLIP18.37■□□□□ 0.53
VRK1-201ENST00000216639 XYLT1Q86Y38 959 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 ZDHHC14Q8IZN3 488 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 PCSK9Q8NBP7 692 aaKnown RBP18.37■□□□□ 0.53
VRK1-201ENST00000216639 SMG8Q8ND04 991 aaKnown RBP18.37■□□□□ 0.53
VRK1-201ENST00000216639 MRPL45Q9BRJ2 306 aaKnown RBP18.37■□□□□ 0.53
VRK1-201ENST00000216639 TSPAN16Q9UKR8 245 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 KPNA7A9QM74 516 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 PPEF2O14830 753 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 ERBB2P04626 1255 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 ASGR1P07306 291 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 PRKAR2AP13861 404 aaKnown RBP18.37■□□□□ 0.53
VRK1-201ENST00000216639 ECHS1P30084 290 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 HSPA9P38646 679 aaKnown RBP18.37■□□□□ 0.53
VRK1-201ENST00000216639 TAF6P49848 677 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 ZNF252P-AS1Q0IIN9 211 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 TRIM32Q13049 653 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 GLIPR1L2Q4G1C9 344 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 CFAP58Q5T655 872 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 DAB2IPQ5VWQ8 1189 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 OR6B3Q8NGW1 331 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 GRK7Q8WTQ7 553 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 SLCO2A1Q92959 643 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 TRIM31Q9BZY9 425 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 RNF39Q9H2S5 420 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 GDAP2Q9NXN4 497 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 HESX1Q9UBX0 185 aa18.37■□□□□ 0.53
VRK1-201ENST00000216639 PDCD11Q14690 1871 aaKnown RBP18.36■□□□□ 0.53
VRK1-201ENST00000216639 F8VP50 259 aa18.36■□□□□ 0.53
VRK1-201ENST00000216639 ECEL1O95672 775 aa18.36■□□□□ 0.53
VRK1-201ENST00000216639 MYCNP04198 464 aaPredicted RBP18.36■□□□□ 0.53
VRK1-201ENST00000216639 SETSIPP0DME0 302 aa18.36■□□□□ 0.53
VRK1-201ENST00000216639 RALAP11233 206 aa18.36■□□□□ 0.53
VRK1-201ENST00000216639 CST5P28325 142 aaPredicted RBP18.36■□□□□ 0.53
VRK1-201ENST00000216639 GGCXP38435 758 aa18.36■□□□□ 0.53
VRK1-201ENST00000216639 COPS2P61201 443 aa18.36■□□□□ 0.53
VRK1-201ENST00000216639 NFX1Q12986 1120 aaKnown RBP18.36■□□□□ 0.53
VRK1-201ENST00000216639 KCNA10Q16322 511 aa18.36■□□□□ 0.53
VRK1-201ENST00000216639 HADHQ16836 314 aaKnown RBP18.36■□□□□ 0.53
VRK1-201ENST00000216639 GOLGA7BQ2TAP0 167 aa18.36■□□□□ 0.53
VRK1-201ENST00000216639 DEFB115Q30KQ5 88 aa18.36■□□□□ 0.53
VRK1-201ENST00000216639 TTC27Q6P3X3 843 aa18.36■□□□□ 0.53
VRK1-201ENST00000216639 TSEN2Q8NCE0 465 aaKnown RBP18.36■□□□□ 0.53
VRK1-201ENST00000216639 UBA3Q8TBC4 463 aa18.36■□□□□ 0.53
VRK1-201ENST00000216639 OSBPL8Q9BZF1 889 aa18.36■□□□□ 0.53
VRK1-201ENST00000216639 SENP6Q9GZR1 1112 aaPredicted RBP18.36■□□□□ 0.53
VRK1-201ENST00000216639 ST3GAL5Q9UNP4 418 aa18.36■□□□□ 0.53
VRK1-201ENST00000216639 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.36■□□□□ 0.53
VRK1-201ENST00000216639 TRIP11Q15643 1979 aa18.36■□□□□ 0.53
VRK1-201ENST00000216639 A8MXQ7 604 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 GPR182O15218 404 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 AOC2O75106 756 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 KRT1P04264 644 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 CCND3P30281 292 aaPredicted RBP18.35■□□□□ 0.53
VRK1-201ENST00000216639 RFC1P35251 1148 aaPredicted RBP18.35■□□□□ 0.53
VRK1-201ENST00000216639 OGDHQ02218 1023 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 MTMR3Q13615 1198 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 ACAP1Q15027 740 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 SOWAHAQ2M3V2 549 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 SYDE1Q6ZW31 735 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms