RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 Q6PD19 689 aa12.97□□□□□ -0.33
Ddx55-202ENSMUST00000111438 Rnf225Q9D7D1 332 aa12.97□□□□□ -0.33
Ddx55-202ENSMUST00000111438 Homer2Q9QWW1 354 aa12.97□□□□□ -0.33
Ddx55-202ENSMUST00000111438 Gm28036V9GXJ1 658 aa12.97□□□□□ -0.33
Ddx55-202ENSMUST00000111438 Myh10Q61879 1976 aaKnown RBP12.96□□□□□ -0.33
Ddx55-202ENSMUST00000111438 Lmo2P25801 158 aa12.96□□□□□ -0.33
Ddx55-202ENSMUST00000111438 Cetn1P41209 172 aa12.96□□□□□ -0.33
Ddx55-202ENSMUST00000111438 Gjb6P70689 261 aa12.96□□□□□ -0.33
Ddx55-202ENSMUST00000111438 Nrp1P97333 923 aa12.96□□□□□ -0.33
Ddx55-202ENSMUST00000111438 Smyd1P97443 490 aa12.96□□□□□ -0.33
Ddx55-202ENSMUST00000111438 Adcy6Q01341 1165 aa12.96□□□□□ -0.33
Ddx55-202ENSMUST00000111438 Pacsin1Q61644 441 aa12.96□□□□□ -0.33
Ddx55-202ENSMUST00000111438 Nucks1Q80XU3 234 aaKnown RBP12.96□□□□□ -0.33
Ddx55-202ENSMUST00000111438 LarsQ8BMJ2 1178 aa12.96□□□□□ -0.33
Ddx55-202ENSMUST00000111438 Q8C1R3 189 aa12.96□□□□□ -0.33
Ddx55-202ENSMUST00000111438 Def6Q8C2K1 630 aa12.96□□□□□ -0.33
Ddx55-202ENSMUST00000111438 IscuQ9D7P6 168 aa12.96□□□□□ -0.33
Ddx55-202ENSMUST00000111438 Epm2aQ9WUA5 330 aa12.96□□□□□ -0.33
Ddx55-202ENSMUST00000111438 Olfr743L7N1Y2 311 aa12.96□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Impa1O55023 277 aa12.96□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Hoxd8P23463 289 aa12.96□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Mgat1P27808 447 aa12.96□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Krt86P97861 486 aa12.96□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Vwa2Q70UZ7 791 aa12.96□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Mical2Q8BML1 960 aa12.96□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Wdr35Q8BND3 1181 aa12.96□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Lig4Q8BTF7 911 aa12.96□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Dis3lQ8C0S1 1053 aa12.96□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Uroc1Q8VC12 676 aa12.96□□□□□ -0.34
Ddx55-202ENSMUST00000111438 PdclQ9DBX2 301 aa12.96□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Rpf2Q9JJ80 306 aaKnown RBP12.96□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Veph1A1A535 833 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Xrcc5P27641 732 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Rad23aP54726 363 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 GaltQ03249 379 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 PostnQ62009 838 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Hook3Q8BUK6 718 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 EmcnQ9R0H2 261 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Slc23a4A0A0J9YUX7 615 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 4930402K13RikB1AW18 415 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Gm4297D3YWB7 211 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Pbx2O35984 430 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Nr3c1P06537 783 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Rrm1P07742 792 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Polr2fP61219 127 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Olfr670Q7TRP3 312 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Vat1lQ80TB8 417 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Polr2eQ80UW8 210 aaKnown RBP12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 EmsyQ8BMB0 1264 aaKnown RBP12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Nipal1Q8BMW7 416 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Smoc2Q8CD91 447 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Usp27Q8CEG8 438 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Lrrc45Q8CIM1 670 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 VillQ91YD6 859 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Q922C1 641 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Tpgs1Q99MS8 303 aa12.95□□□□□ -0.34
Ddx55-202ENSMUST00000111438 EloblA6PWE0 161 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Vmn2r19G5E8G4 854 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Dpysl4O35098 572 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Grem1O70326 184 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Cyp17a1P27786 507 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Rhox5P52651 210 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Pou6f1Q07916 301 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Cpne7Q0VE82 557 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Skap1Q3UUV5 355 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Bbof1Q3V079 533 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Prss36Q5K2P8 849 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Cyfip2Q5SQX6 1253 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Zfyve28Q6ZPK7 905 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Zbtb6Q8K088 423 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Kctd15Q8K0E1 283 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Il17cQ8K4C5 194 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Ace2Q8R0I0 805 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Pip4k2cQ91XU3 421 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Lysmd1Q9D0E3 226 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Lrrc57Q9D1G5 239 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Cep83Q9D5R3 692 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Stk11Q9WTK7 436 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Arhgef10Q8C033 1345 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Ppfia4B8QI36 1187 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 C2cd2E9Q3C1 696 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Olfr1354E9Q5G9 310 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Ube3aO08759 870 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Xirp1O70373 1129 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Ctnnd1P30999 938 aaKnown RBP12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 LipeP54310 759 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Lhx5P61375 402 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Lig3P97386 1015 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 HmmrQ00547 794 aaKnown RBP12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 UrgcpQ5NCI0 926 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Mapk6Q61532 720 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Papd5Q68ED3 633 aaKnown RBP12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Tdpoz2Q717B2 364 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Wdtc1Q80ZK9 677 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Zcchc14Q8VIG0 956 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 NamptQ99KQ4 491 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Mms19Q9D071 1031 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Iigp1Q9QZ85 413 aa12.94□□□□□ -0.34
Ddx55-202ENSMUST00000111438 Scn5aQ9JJV9 2019 aa12.93□□□□□ -0.34
Ddx55-202ENSMUST00000111438 4933406M09RikG3XA12 479 aa12.93□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 91.3 ms