RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Stx18Q8VDS8 334 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Pde6cQ91ZQ1 861 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Mrpl1Q99N96 336 aaKnown RBP8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Cntnap2Q9CPW0 1332 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Rnf225Q9D7D1 332 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Ccdc22Q9JIG7 627 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Mical3Q8CJ19 1993 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 XdhQ00519 1335 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Itpripl1A2ASA8 547 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Kif28pD3YXS5 1028 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Barx2O08686 283 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Mcpt4P21812 246 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 ErfP70459 551 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 NfiaQ02780 532 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Ankmy2Q3TPE9 440 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Atp13a5Q3TYU2 1216 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Vwa3aQ3UVV9 1148 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 PrkciQ62074 595 aaKnown RBP8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Sema5aQ62217 1077 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Fam181bQ80VF6 417 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Snx30Q8CE50 437 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 ZwilchQ8R060 589 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Ccdc137Q8R0K4 290 aaKnown RBP8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Cpa5Q8R4H4 436 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Pcolce2Q8R4W6 414 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Pls3Q99K51 630 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Rnf135Q9CWS1 417 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Klhl35Q9CZ49 574 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Tgm5Q9D7I9 724 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Spaca1Q9DA48 305 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Wdr83Q9DAJ4 315 aaKnown RBP8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Prl2b1Q9DAZ2 228 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Adam23Q9R1V7 829 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 HnrnpcQ9Z204 313 aaKnown RBP8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Chek2Q9Z265 546 aa8.67□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Vwa5b1A9Z1V5 1215 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Gm4871D3Z0W7 314 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Psd3Q2PFD7 1037 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Zfp607aQ3TQG9 686 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Srek1ip1Q4V9W2 153 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Clec4a4Q5YIR8 236 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Pde1aQ61481 565 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Grid1Q61627 1009 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Ip6k2Q80V72 448 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Chn2Q80XD1 332 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Btnl9Q8BJE2 536 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Usp1Q8BJQ2 784 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Rcn2Q8BP92 320 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Nat14Q8BVG8 206 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Eno4Q8C042 619 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Cfap36Q8C6E0 343 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Gm5591Q8CDK1 855 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Olfr1502Q8VG66 316 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Tmco4Q91WU4 631 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 CalcbQ99MP3 130 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Tdrd12Q9CWU0 1215 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 EqtnQ9D9V2 337 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Eid1Q9DCR4 169 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Plod1Q9R0E2 728 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Cetn2Q9R1K9 172 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Tll2Q9WVM6 1012 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Apol7bB1AQP7 369 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Vmn2r63E9Q0K5 859 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Gm9268E9Q0M3 861 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Zfp780bE9Q2S6 806 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Vmn2r62K7N712 859 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 UrosP51163 265 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Stmn2P55821 179 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Pde1bQ01065 535 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Plk1Q07832 603 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Apol7eQ3UZ24 369 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Btbd10Q80X66 475 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Usp6nlQ80XC3 819 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Mettl21cQ8BLU2 248 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Pak4Q8BTW9 593 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Q8C4P0 716 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Mboat7Q8CHK3 473 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Btbd6Q8K2J9 488 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 CrygnQ8VHL5 183 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Yipf1Q91VU1 306 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Sntg2Q925E0 539 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Vta1Q9CR26 309 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Lrrc17Q9CXD9 443 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Drc3Q9D5E4 523 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Extl2Q9ES89 330 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Gdf11Q9Z1W4 405 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Myh9Q8VDD5 1960 aaKnown RBP8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Zfp612A0A1D5RMC2 672 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 1700024B05RikE9Q6D7 167 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Irf8P23611 424 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Fmr1P35922 614 aaKnown RBP8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Upf3bQ3ULL6 472 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Spag6Q3V0U9 509 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Kiaa0319Q5SZV5 1081 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Ugt1a1Q63886 535 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Adgrg6Q6F3F9 1165 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Prr18Q6PAN7 307 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 DstykQ6XUX1 927 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Olfr814Q7TRH4 310 aa8.66□□□□□ -1.02
Cdc40-201ENSMUST00000044166 Dnajc6Q80TZ3 938 aa8.66□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms