RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 CstaP56567 97 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Chi3l1Q61362 389 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Tpp2Q64514 1262 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Elac2Q80Y81 831 aaKnown RBP17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Tcp10aQ80W76 438 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 1700017N19RikA0A087WPJ1 469 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 RaraP11416 462 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Mgat1P27808 447 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Psmc6P62334 389 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Olfr395Q8VGR3 312 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Nmrk1Q91W63 195 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Arih2Q9Z1K6 492 aa17.23■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Mindy4b-psA0A1W2P7H6 457 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Hoxd10P28359 340 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Rasa2P58069 847 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Gm8267E9Q207 261 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Sar1aP36536 198 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Krt6aP50446 553 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Man1c1Q6NXK9 625 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Dedd2Q8QZV0 330 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Dppa3Q8QZY3 150 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Pcdha3Q91Y16 942 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Mrto4Q9D0I8 239 aaKnown RBP17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Rasgrp1Q9Z1S3 795 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 CemipQ8BI06 1361 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Serpinh1P19324 417 aaKnown RBP17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Lrpap1P55302 360 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 CartptP56388 129 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Mrpl1Q99N96 336 aaKnown RBP17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Aff4Q9ESC8 1160 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Mpp3O88910 568 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 BsndQ8VIM4 307 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 LrmdaQ9D9B4 229 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Tcp10bE9PYJ0 438 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Serpina3mQ03734 418 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Tmem237Q3V0J1 427 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Ints2Q80UK8 1198 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Zscan4-ps3A0A1B0GRH6 506 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Zscan4-ps2A0A1C7CYU6 506 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Pgk2P09041 417 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 L1camP11627 1260 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Tdrd5Q5VCS6 1040 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Ripor1Q68FE6 1223 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Slc9b1Q8C0X2 565 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Mcrs1Q99L90 462 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Mrpl57Q9CQF8 102 aaKnown RBP17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Nup50Q9JIH2 466 aaKnown RBP17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Tada2bD3Z4Z0 420 aaKnown RBP17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 9130409I23RikQ3TS87 320 aa17.22■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Pstpip1P97814 415 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Cyfip1Q7TMB8 1253 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Chmp1b1Q99LU0 199 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Atp8b5A3FIN4 1183 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Clrn2B2RVW2 232 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Olfr726E9Q8X3 321 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Fgd3O88842 733 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Rbp3P49194 1234 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Olfr725Q05A45 321 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Edrf1Q6GQV7 1239 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Ankzf1Q80UU1 748 aaKnown RBP17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 LactbQ9EP89 551 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Gpr63Q9EQQ3 425 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Spin2fJ3QPU0 254 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Cdc25cP48967 447 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Gemin4Q6P6L6 1058 aaKnown RBP17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Dync1li2Q6PDL0 492 aaKnown RBP17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Rbmx2Q8R0F5 326 aaKnown RBP17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Stk33Q924X7 491 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Abcb11Q9QY30 1321 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Mup6A2AV72 179 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Mark2Q05512 776 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Fbxo39Q5NBU5 443 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Epha7Q61772 998 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Zbed4Q80WQ9 1168 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Efl1Q8C0D5 1127 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Pnma3Q8JZW8 466 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Krt86P97861 486 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Olfml2bQ3V1G4 746 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Nudt16Q6P3D0 195 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Olfr698Q7TRN4 311 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Sik2Q8CFH6 931 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Cyp2c50Q91X77 490 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Pds5aQ6A026 1332 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Cst8P32766 142 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Lrig3Q6P1C6 1117 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Sel1l3Q80TS8 1137 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Hspa13Q8BM72 471 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Ppp1r16bQ8VHQ3 568 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Far1Q922J9 515 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Asah2Q9JHE3 756 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Itga2bQ9QUM0 1033 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Naaladl2A0A0N4SUJ3 795 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 MafgO54790 162 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Thrap3Q569Z6 951 aaKnown RBP17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Sugp1Q8CH02 643 aaKnown RBP17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 TwnkQ8CIW5 685 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Chrna3Q8R4G9 499 aa17.21■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Rpl36P47964 105 aaKnown RBP17.21■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 TsnQ62348 228 aaKnown RBP17.21■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Tldc1Q8K0P3 455 aa17.21■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms