RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	BER1	Q06688	274 aa	Known RBP	6.14	□□□□□ -1.43
TGA1	tA(UGC)A	YDL242W	Q07746	117 aa		6.14	□□□□□ -1.43
TGA1	tA(UGC)A	SFT2	P38166	215 aa		6.13	□□□□□ -1.43
TGA1	tA(UGC)A	SAS2	P40963	338 aa		6.13	□□□□□ -1.43
TGA1	tA(UGC)A	LCB3	P47013	409 aa		6.13	□□□□□ -1.43
TGA1	tA(UGC)A	ALG13	P53178	202 aa		6.13	□□□□□ -1.43
TGA1	tA(UGC)A	FYV6	P53913	173 aa		6.13	□□□□□ -1.43
TGA1	tA(UGC)A	CTR3	Q06686	241 aa		6.13	□□□□□ -1.43
TGA1	tA(UGC)A	YGL194C-A	Q2V2P6	80 aa		6.13	□□□□□ -1.43
TGA1	tA(UGC)A	NRG2	P38082	220 aa		6.12	□□□□□ -1.43
TGA1	tA(UGC)A	LSM2	P38203	95 aa	Known RBP	6.12	□□□□□ -1.43
TGA1	tA(UGC)A	YMR007W	Q03675	126 aa		6.12	□□□□□ -1.43
TGA1	tA(UGC)A	RRG8	Q06109	277 aa		6.12	□□□□□ -1.43
TGA1	tA(UGC)A	QCR9	P22289	66 aa		6.11	□□□□□ -1.43
TGA1	tA(UGC)A	ASP1	P38986	381 aa	Predicted RBP	6.11	□□□□□ -1.43
TGA1	tA(UGC)A	PEX7	P39108	375 aa		6.11	□□□□□ -1.43
TGA1	tA(UGC)A	GPI2	P46961	280 aa		6.11	□□□□□ -1.43
TGA1	tA(UGC)A	HAM1	P47119	197 aa	Known RBP	6.11	□□□□□ -1.43
TGA1	tA(UGC)A	GNP1	P48813	663 aa		6.11	□□□□□ -1.43
TGA1	tA(UGC)A	ODC1	Q03028	310 aa		6.11	□□□□□ -1.43
TGA1	tA(UGC)A	AVO2	Q04749	426 aa		6.11	□□□□□ -1.43
TGA1	tA(UGC)A	IZH3	Q07959	543 aa		6.11	□□□□□ -1.43
TGA1	tA(UGC)A	MLF3	P32047	452 aa		6.1	□□□□□ -1.43
TGA1	tA(UGC)A	CMC1	P36064	111 aa		6.1	□□□□□ -1.43
TGA1	tA(UGC)A	GCV3	P39726	170 aa	Predicted RBP	6.1	□□□□□ -1.43
TGA1	tA(UGC)A	YNL146C-A	Q3E7Z1	64 aa		6.1	□□□□□ -1.43
TGA1	tA(UGC)A	UBI4	P0CG63	381 aa	Known RBP	6.09	□□□□□ -1.43
TGA1	tA(UGC)A	CDC50	P25656	391 aa		6.09	□□□□□ -1.43
TGA1	tA(UGC)A	DER1	P38307	211 aa		6.09	□□□□□ -1.43
TGA1	tA(UGC)A	PTC7	P38797	343 aa		6.09	□□□□□ -1.43
TGA1	tA(UGC)A	YNR071C	P53757	342 aa		6.09	□□□□□ -1.43
TGA1	tA(UGC)A	MRPS17	Q03246	237 aa	Predicted RBP	6.09	□□□□□ -1.43
TGA1	tA(UGC)A	YMR244W	Q04018	355 aa		6.09	□□□□□ -1.43
TGA1	tA(UGC)A	YOL160W	Q08321	113 aa		6.09	□□□□□ -1.43
TGA1	tA(UGC)A	PRM7	Q12459	698 aa		6.09	□□□□□ -1.43
TGA1	tA(UGC)A	DFR1	P07807	211 aa	Known RBP RIP-Chip data	6.08	□□□□□ -1.44	not detected
TGA1	tA(UGC)A	GCN3	P14741	305 aa		6.08	□□□□□ -1.44
TGA1	tA(UGC)A	YIP3	P53633	176 aa		6.08	□□□□□ -1.44
TGA1	tA(UGC)A	YNR066C	P53752	436 aa		6.08	□□□□□ -1.44
TGA1	tA(UGC)A	COX12	Q01519	83 aa		6.08	□□□□□ -1.44
TGA1	tA(UGC)A	IZH1	Q03419	316 aa		6.08	□□□□□ -1.44
TGA1	tA(UGC)A	GEP3	Q08622	556 aa		6.08	□□□□□ -1.44
TGA1	tA(UGC)A	DDI2	P0CH63	225 aa		6.07	□□□□□ -1.44
TGA1	tA(UGC)A	DDI3	P0CH64	225 aa		6.07	□□□□□ -1.44
TGA1	tA(UGC)A	SPO13	P23624	291 aa		6.07	□□□□□ -1.44
TGA1	tA(UGC)A	YIL077C	P40508	320 aa		6.07	□□□□□ -1.44
TGA1	tA(UGC)A	RIB4	P50861	169 aa	Predicted RBP	6.07	□□□□□ -1.44
TGA1	tA(UGC)A	MRPL50	P53724	139 aa		6.07	□□□□□ -1.44
TGA1	tA(UGC)A	RDS3	Q06835	107 aa	Predicted RBP	6.07	□□□□□ -1.44
TGA1	tA(UGC)A	YOR011W-A	Q3E807	68 aa		6.07	□□□□□ -1.44
TGA1	tA(UGC)A	MAG1	P22134	296 aa	Known RBP	6.06	□□□□□ -1.44
TGA1	tA(UGC)A	SRB7	P47822	140 aa		6.06	□□□□□ -1.44
TGA1	tA(UGC)A	DSK2	P48510	373 aa		6.06	□□□□□ -1.44
TGA1	tA(UGC)A	UBC7	Q02159	165 aa		6.06	□□□□□ -1.44
TGA1	tA(UGC)A	MRPS8	Q03799	155 aa		6.06	□□□□□ -1.44
TGA1	tA(UGC)A	FCF2	Q12035	217 aa	Predicted RBP	6.06	□□□□□ -1.44
TGA1	tA(UGC)A	CYC7	P00045	113 aa		6.05	□□□□□ -1.44
TGA1	tA(UGC)A	FIT2	Q08906	153 aa		6.05	□□□□□ -1.44
TGA1	tA(UGC)A	YBR292C	P38357	123 aa		6.04	□□□□□ -1.44
TGA1	tA(UGC)A	MIG3	P39943	394 aa		6.04	□□□□□ -1.44
TGA1	tA(UGC)A	YPL162C	Q12042	273 aa		6.04	□□□□□ -1.44
TGA1	tA(UGC)A	ATX2	Q12067	313 aa		6.04	□□□□□ -1.44
TGA1	tA(UGC)A	MRP2	P10663	115 aa	Predicted RBP	6.03	□□□□□ -1.44
TGA1	tA(UGC)A	TIR2	P33890	251 aa		6.03	□□□□□ -1.44
TGA1	tA(UGC)A	SPI1	P40092	148 aa		6.03	□□□□□ -1.44
TGA1	tA(UGC)A	JAC1	P53193	184 aa		6.03	□□□□□ -1.44
TGA1	tA(UGC)A	MRX11	Q03079	207 aa		6.03	□□□□□ -1.44
TGA1	tA(UGC)A	ATC1	Q04005	294 aa		6.03	□□□□□ -1.44
TGA1	tA(UGC)A	CCW12	Q12127	133 aa		6.03	□□□□□ -1.44
TGA1	tA(UGC)A	YPR063C	Q12160	140 aa		6.03	□□□□□ -1.44
TGA1	tA(UGC)A	YOR015W	Q12169	119 aa		6.03	□□□□□ -1.44
TGA1	tA(UGC)A	TY1A-BR	Q12217	440 aa		6.03	□□□□□ -1.44
TGA1	tA(UGC)A	COX19	Q3E731	98 aa		6.03	□□□□□ -1.44
TGA1	tA(UGC)A	PHD1	P36093	366 aa		6.02	□□□□□ -1.45
TGA1	tA(UGC)A	YER135C	P40082	130 aa		6.02	□□□□□ -1.45
TGA1	tA(UGC)A	YFR035C	P43608	114 aa		6.02	□□□□□ -1.45
TGA1	tA(UGC)A	CAF40	P53829	373 aa		6.02	□□□□□ -1.45
TGA1	tA(UGC)A	ADD37	Q03233	198 aa		6.02	□□□□□ -1.45
TGA1	tA(UGC)A	RPS2	P25443	254 aa	Known RBP	6.01	□□□□□ -1.45
TGA1	tA(UGC)A	TRS20	P38334	175 aa		6.01	□□□□□ -1.45
TGA1	tA(UGC)A	MBB1	P39534	108 aa		6.01	□□□□□ -1.45
TGA1	tA(UGC)A	PRE5	P40302	234 aa	Known RBP	6.01	□□□□□ -1.45
TGA1	tA(UGC)A	ISU1	Q03020	165 aa		6.01	□□□□□ -1.45
TGA1	tA(UGC)A	MRS1	P07266	363 aa		6	□□□□□ -1.45
TGA1	tA(UGC)A	RPB3	P16370	318 aa	Known RBP	6	□□□□□ -1.45
TGA1	tA(UGC)A	ACP1	P32463	125 aa		6	□□□□□ -1.45
TGA1	tA(UGC)A	YHR022C	P38763	256 aa		6	□□□□□ -1.45
TGA1	tA(UGC)A	SPC25	P40014	221 aa		6	□□□□□ -1.45
TGA1	tA(UGC)A	SMD3	P43321	101 aa	Known RBP	6	□□□□□ -1.45
TGA1	tA(UGC)A	LOC1	P43586	204 aa	Predicted RBP	6	□□□□□ -1.45
TGA1	tA(UGC)A	YCL001W-A	P87012	153 aa		6	□□□□□ -1.45
TGA1	tA(UGC)A	LOA1	Q06508	300 aa		6	□□□□□ -1.45
TGA1	tA(UGC)A	STP4	Q07351	490 aa		6	□□□□□ -1.45
TGA1	tA(UGC)A	YLR125W	Q12138	136 aa		6	□□□□□ -1.45
TGA1	tA(UGC)A	YPR145C-A	Q2V2P0	78 aa		6	□□□□□ -1.45
TGA1	tA(UGC)A	ZRC1	P20107	442 aa		5.99	□□□□□ -1.45
TGA1	tA(UGC)A	HSP12	P22943	109 aa	Known RBP	5.99	□□□□□ -1.45
TGA1	tA(UGC)A	RPS0A	P32905	252 aa	Known RBP	5.99	□□□□□ -1.45
TGA1	tA(UGC)A	EMC5	P40540	141 aa		5.99	□□□□□ -1.45
TGA1	tA(UGC)A	PHO23	P50947	330 aa		5.99	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms