RNA–Protein interactions for RNA: snR5

snR5, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR5, Length 204 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR5	snR5	MOB1	P40484	314 aa		0.56	□□□□□ -2.32
snR5	snR5	GLC8	P41818	229 aa		0.55	□□□□□ -2.32
snR5	snR5	YML079W	Q03629	201 aa		0.55	□□□□□ -2.32
snR5	snR5	YET3	Q07451	203 aa		0.55	□□□□□ -2.32
snR5	snR5	BRX1	Q08235	291 aa	Known RBP	0.55	□□□□□ -2.32
snR5	snR5	APA2	P22108	325 aa		0.54	□□□□□ -2.32
snR5	snR5	YGR269W	P40326	108 aa		0.54	□□□□□ -2.32
snR5	snR5	POG1	P40473	351 aa		0.54	□□□□□ -2.32
snR5	snR5	APS3	P47064	194 aa		0.54	□□□□□ -2.32
snR5	snR5	XPT1	P47165	209 aa		0.54	□□□□□ -2.32
snR5	snR5	SOL1	P50278	321 aa		0.54	□□□□□ -2.32
snR5	snR5	SNO1	Q03144	224 aa		0.54	□□□□□ -2.32
snR5	snR5	FCY1	Q12178	158 aa		0.54	□□□□□ -2.32
snR5	snR5	RPS25B	P0C0T4	108 aa	Known RBP	0.53	□□□□□ -2.32
snR5	snR5	NUF2	P33895	451 aa		0.53	□□□□□ -2.32
snR5	snR5	JAC1	P53193	184 aa		0.53	□□□□□ -2.32
snR5	snR5	TIM13	P53299	105 aa		0.53	□□□□□ -2.32
snR5	snR5	RPS25A	Q3E792	108 aa	Predicted RBP	0.53	□□□□□ -2.32
snR5	snR5	YHR213W-B	Q8TGK1	99 aa		0.53	□□□□□ -2.32
snR5	snR5	RAD6	P06104	172 aa		0.52	□□□□□ -2.33
snR5	snR5	SPS2	P08459	502 aa		0.52	□□□□□ -2.33
snR5	snR5	GLR1	P41921	483 aa	Known RBP	0.52	□□□□□ -2.33
snR5	snR5	PRM3	Q08931	133 aa		0.52	□□□□□ -2.33
snR5	snR5	YDL157C	Q12082	118 aa		0.52	□□□□□ -2.33
snR5	snR5	HOP2	P53187	214 aa		0.51	□□□□□ -2.33
snR5	snR5	SED1	Q01589	338 aa		0.51	□□□□□ -2.33
snR5	snR5	INO4	P13902	151 aa		0.5	□□□□□ -2.33
snR5	snR5	SYM1	Q06563	197 aa		0.5	□□□□□ -2.33
snR5	snR5	CIN5	P40917	295 aa		0.49	□□□□□ -2.33
snR5	snR5	CCC1	P47818	322 aa		0.49	□□□□□ -2.33
snR5	snR5	TAF2	P23255	1407 aa		0.48	□□□□□ -2.33
snR5	snR5	TRM3	Q07527	1436 aa		0.48	□□□□□ -2.33
snR5	snR5	ATP7	P30902	174 aa		0.48	□□□□□ -2.33
snR5	snR5	SPT14	P32363	452 aa		0.48	□□□□□ -2.33
snR5	snR5	YEL028W	P39989	153 aa		0.48	□□□□□ -2.33
snR5	snR5	ATG10	Q07879	167 aa		0.48	□□□□□ -2.33
snR5	snR5	TRR1	P29509	319 aa	Known RBP	0.47	□□□□□ -2.33
snR5	snR5	YBR027C	P38220	110 aa		0.47	□□□□□ -2.33
snR5	snR5	CSH1	P38287	376 aa		0.47	□□□□□ -2.33
snR5	snR5	LIP1	Q03579	150 aa		0.47	□□□□□ -2.33
snR5	snR5	HRD1	Q08109	551 aa		0.47	□□□□□ -2.33
snR5	snR5	ATG8	P38182	117 aa	RIP-Chip data	0.46	□□□□□ -2.34	not detected
snR5	snR5	GEP7	P53171	287 aa		0.46	□□□□□ -2.34
snR5	snR5	GRX3	Q03835	250 aa		0.46	□□□□□ -2.34
snR5	snR5	YDL241W	Q07738	123 aa		0.46	□□□□□ -2.34
snR5	snR5	YPT31	P38555	223 aa	Known RBP	0.45	□□□□□ -2.34
snR5	snR5	YPR114W	Q06107	315 aa		0.45	□□□□□ -2.34
snR5	snR5	RIB3	Q99258	208 aa		0.45	□□□□□ -2.34
snR5	snR5	ROM2	P51862	1356 aa	Known RBP	0.45	□□□□□ -2.34
snR5	snR5	PLP1	Q04004	230 aa		0.44	□□□□□ -2.34
snR5	snR5	THI74	Q04083	370 aa		0.44	□□□□□ -2.34
snR5	snR5	VAM10	Q08474	114 aa		0.44	□□□□□ -2.34
snR5	snR5	UIP4	Q08926	304 aa		0.44	□□□□□ -2.34
snR5	snR5	PEX11	Q12462	236 aa		0.44	□□□□□ -2.34
snR5	snR5	CMC4	Q3E7A9	73 aa		0.44	□□□□□ -2.34
snR5	snR5	RAD51	P25454	400 aa		0.43	□□□□□ -2.34
snR5	snR5	PTC1	P35182	281 aa		0.43	□□□□□ -2.34
snR5	snR5	YLR050C	Q12155	161 aa	Known RBP	0.43	□□□□□ -2.34
snR5	snR5	SRP102	P36057	244 aa	Predicted RBP	0.42	□□□□□ -2.34
snR5	snR5	YEL014C	P39999	101 aa		0.42	□□□□□ -2.34
snR5	snR5	HSK3	P69852	69 aa		0.42	□□□□□ -2.34
snR5	snR5	YDR102C	Q03864	110 aa		0.42	□□□□□ -2.34
snR5	snR5	YOR072W	Q08486	104 aa		0.42	□□□□□ -2.34
snR5	snR5	HAP2	P06774	265 aa		0.41	□□□□□ -2.34
snR5	snR5	RPS22A	P0C0W1	130 aa	Known RBP	0.41	□□□□□ -2.34
snR5	snR5	YNR064C	P53750	290 aa		0.41	□□□□□ -2.34
snR5	snR5	YNL122C	P53921	115 aa	Predicted RBP	0.41	□□□□□ -2.34
snR5	snR5	MGR2	Q02889	113 aa		0.41	□□□□□ -2.34
snR5	snR5	RPS22B	Q3E7Y3	130 aa	Known RBP	0.41	□□□□□ -2.34
snR5	snR5	CDC39	P25655	2108 aa	Known RBP	0.41	□□□□□ -2.34
snR5	snR5	RPL43A	P0CX25	92 aa	Known RBP	0.4	□□□□□ -2.35
snR5	snR5	RPL43B	P0CX26	92 aa		0.4	□□□□□ -2.35
snR5	snR5	YMR141C	P40211	102 aa		0.4	□□□□□ -2.35
snR5	snR5	YIP3	P53633	176 aa		0.4	□□□□□ -2.35
snR5	snR5	SEN15	Q04675	128 aa		0.4	□□□□□ -2.35
snR5	snR5	ECM31	P38122	312 aa		0.39	□□□□□ -2.35
snR5	snR5	SEC72	P39742	193 aa	Known RBP	0.39	□□□□□ -2.35
snR5	snR5	GRE1	Q08969	168 aa		0.39	□□□□□ -2.35
snR5	snR5	ADE6	P38972	1358 aa	Known RBP	0.38	□□□□□ -2.35
snR5	snR5	EGD2	P38879	174 aa	Known RBP	0.38	□□□□□ -2.35
snR5	snR5	HYP2	P23301	157 aa	Known RBP	0.37	□□□□□ -2.35
snR5	snR5	HSP150	P32478	413 aa		0.37	□□□□□ -2.35
snR5	snR5	UBC6	P33296	250 aa	Predicted RBP	0.37	□□□□□ -2.35
snR5	snR5	YNL140C	P53910	189 aa		0.37	□□□□□ -2.35
snR5	snR5	NMA1	Q06178	401 aa	Known RBP	0.37	□□□□□ -2.35
snR5	snR5	CMD1	P06787	147 aa	Known RBP	0.36	□□□□□ -2.35
snR5	snR5	YHR140W	P38842	239 aa		0.36	□□□□□ -2.35
snR5	snR5	YLR307C-A	Q3E825	87 aa		0.36	□□□□□ -2.35
snR5	snR5	MRS4	P23500	304 aa		0.35	□□□□□ -2.35
snR5	snR5	GIM3	P53900	129 aa		0.35	□□□□□ -2.35
snR5	snR5	ATP5	P09457	212 aa		0.34	□□□□□ -2.36
snR5	snR5	RPL35A	P0CX84	120 aa	Known RBP	0.34	□□□□□ -2.36
snR5	snR5	RPL35B	P0CX85	120 aa	Known RBP	0.34	□□□□□ -2.36
snR5	snR5	IPT1	P38954	527 aa		0.34	□□□□□ -2.36
snR5	snR5	TMA20	P89886	181 aa	Predicted RBP	0.34	□□□□□ -2.36
snR5	snR5	SRP21	P32342	167 aa		0.33	□□□□□ -2.36
snR5	snR5	HTD2	P38790	280 aa	Known RBP	0.33	□□□□□ -2.36
snR5	snR5	SRP14	P38985	146 aa		0.33	□□□□□ -2.36
snR5	snR5	DIE2	P50076	525 aa		0.33	□□□□□ -2.36
snR5	snR5	YGL101W	P53144	215 aa		0.33	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 58.7 ms