RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPN1	YPR133C	BOL1	Q3E793	110 aa		3.14	□□□□□ -1.91
SPN1	YPR133C	YPR108W-A	Q3E7B3	70 aa		3.14	□□□□□ -1.91
SPN1	YPR133C	YLR365W	Q7LIF2	110 aa		3.14	□□□□□ -1.91
SPN1	YPR133C	ODC2	Q99297	307 aa		3.14	□□□□□ -1.91
SPN1	YPR133C	YEL009C-A	A0A023PZF2	135 aa		3.13	□□□□□ -1.91
SPN1	YPR133C	RPL16B	P26785	198 aa	Known RBP	3.13	□□□□□ -1.91
SPN1	YPR133C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
SPN1	YPR133C	AVT5	P38176	459 aa		3.13	□□□□□ -1.91
SPN1	YPR133C	YPC1	P38298	316 aa		3.13	□□□□□ -1.91
SPN1	YPR133C	MED8	P38304	223 aa		3.13	□□□□□ -1.91
SPN1	YPR133C	YPI1	P43587	155 aa		3.13	□□□□□ -1.91
SPN1	YPR133C	ALG13	P53178	202 aa		3.13	□□□□□ -1.91
SPN1	YPR133C	COX12	Q01519	83 aa		3.13	□□□□□ -1.91
SPN1	YPR133C	YPR013C	Q12145	317 aa		3.13	□□□□□ -1.91
SPN1	YPR133C	NOP1	P15646	327 aa	Known RBP	3.12	□□□□□ -1.91
SPN1	YPR133C	URA6	P15700	204 aa		3.12	□□□□□ -1.91
SPN1	YPR133C	RNA15	P25299	296 aa	Predicted RBP	3.12	□□□□□ -1.91
SPN1	YPR133C	POF1	P25576	258 aa		3.12	□□□□□ -1.91
SPN1	YPR133C	RPL16A	P26784	199 aa	Known RBP	3.12	□□□□□ -1.91
SPN1	YPR133C	AGA1	P32323	725 aa		3.12	□□□□□ -1.91
SPN1	YPR133C	ERG28	P40030	148 aa		3.12	□□□□□ -1.91
SPN1	YPR133C	GAT4	P40569	121 aa		3.12	□□□□□ -1.91
SPN1	YPR133C	YJL218W	P40892	196 aa	Known RBP	3.12	□□□□□ -1.91
SPN1	YPR133C	LST8	P41318	303 aa		3.12	□□□□□ -1.91
SPN1	YPR133C	CWC23	P52868	283 aa	Predicted RBP	3.12	□□□□□ -1.91
SPN1	YPR133C	UTP23	Q12339	254 aa	Known RBP	3.12	□□□□□ -1.91
SPN1	YPR133C	YKL183C-A	Q3E765	70 aa		3.12	□□□□□ -1.91
SPN1	YPR133C	CMC2	Q3E7A4	109 aa		3.12	□□□□□ -1.91
SPN1	YPR133C	SOD1	P00445	154 aa	Known RBP	3.11	□□□□□ -1.91
SPN1	YPR133C	PIS1	P06197	220 aa	Known RBP	3.11	□□□□□ -1.91
SPN1	YPR133C	HIS3	P06633	220 aa		3.11	□□□□□ -1.91
SPN1	YPR133C	SEN2	P16658	377 aa		3.11	□□□□□ -1.91
SPN1	YPR133C	YPT31	P38555	223 aa	Known RBP	3.11	□□□□□ -1.91
SPN1	YPR133C	YHR138C	P38841	114 aa	Predicted RBP	3.11	□□□□□ -1.91
SPN1	YPR133C	LCB3	P47013	409 aa		3.11	□□□□□ -1.91
SPN1	YPR133C	YAE1	P47118	141 aa	Predicted RBP	3.11	□□□□□ -1.91
SPN1	YPR133C	TDA4	P47153	279 aa		3.11	□□□□□ -1.91
SPN1	YPR133C	VHT1	P53241	593 aa		3.11	□□□□□ -1.91
SPN1	YPR133C	ERP1	Q05359	219 aa	Known RBP	3.11	□□□□□ -1.91
SPN1	YPR133C	ATG39	Q06159	398 aa		3.11	□□□□□ -1.91
SPN1	YPR133C	HRD1	Q08109	551 aa		3.11	□□□□□ -1.91
SPN1	YPR133C	AYT1	Q12226	474 aa		3.11	□□□□□ -1.91
SPN1	YPR133C	HUG1	Q6Q5K6	68 aa		3.11	□□□□□ -1.91
SPN1	YPR133C	MED11	Q99278	115 aa		3.11	□□□□□ -1.91
SPN1	YPR133C	CYC3	P06182	269 aa		3.1	□□□□□ -1.91
SPN1	YPR133C	YBR121C-A	P0C5L4	52 aa		3.1	□□□□□ -1.91
SPN1	YPR133C	RPL23A	P0CX41	137 aa	Known RBP	3.1	□□□□□ -1.91
SPN1	YPR133C	RPL23B	P0CX42	137 aa	Known RBP	3.1	□□□□□ -1.91
SPN1	YPR133C	RPS18A	P0CX55	146 aa	Known RBP	3.1	□□□□□ -1.91
SPN1	YPR133C	RPS18B	P0CX56	146 aa	Predicted RBP	3.1	□□□□□ -1.91
SPN1	YPR133C	RPR2	P40571	144 aa		3.1	□□□□□ -1.91
SPN1	YPR133C	MIC26	P50087	233 aa		3.1	□□□□□ -1.91
SPN1	YPR133C	ERV29	P53337	310 aa		3.1	□□□□□ -1.91
SPN1	YPR133C	SWT21	P53873	357 aa	Predicted RBP	3.1	□□□□□ -1.91
SPN1	YPR133C	FYV6	P53913	173 aa		3.1	□□□□□ -1.91
SPN1	YPR133C	MAK3	Q03503	176 aa		3.1	□□□□□ -1.91
SPN1	YPR133C	CTR3	Q06686	241 aa		3.1	□□□□□ -1.91
SPN1	YPR133C	YPL225W	Q08971	146 aa	Known RBP	3.1	□□□□□ -1.91
SPN1	YPR133C	SPT4	P32914	102 aa	Predicted RBP	3.09	□□□□□ -1.91
SPN1	YPR133C	YAR068W	P39564	161 aa		3.09	□□□□□ -1.91
SPN1	YPR133C	VMA10	P48836	114 aa	Known RBP	3.09	□□□□□ -1.91
SPN1	YPR133C	YGR042W	P53227	271 aa		3.09	□□□□□ -1.91
SPN1	YPR133C	YNG1	Q08465	219 aa		3.09	□□□□□ -1.91
SPN1	YPR133C	ATG41	Q12048	136 aa		3.09	□□□□□ -1.91
SPN1	YPR133C	SME1	Q12330	94 aa	Predicted RBP	3.09	□□□□□ -1.91
SPN1	YPR133C	PRM4	Q12498	284 aa		3.09	□□□□□ -1.91
SPN1	YPR133C	HTZ1	Q12692	134 aa	Known RBP	3.09	□□□□□ -1.91
SPN1	YPR133C	TRP1	P00912	224 aa		3.08	□□□□□ -1.92
SPN1	YPR133C	RPL27A	P0C2H6	136 aa	Known RBP	3.08	□□□□□ -1.92
SPN1	YPR133C	RPL27B	P0C2H7	136 aa	Known RBP	3.08	□□□□□ -1.92
SPN1	YPR133C	HOM6	P31116	359 aa	Known RBP	3.08	□□□□□ -1.92
SPN1	YPR133C	DOG2	P38773	246 aa		3.08	□□□□□ -1.92
SPN1	YPR133C	DOG1	P38774	246 aa		3.08	□□□□□ -1.92
SPN1	YPR133C	ARO8	P53090	500 aa	Known RBP	3.08	□□□□□ -1.92
SPN1	YPR133C	GIM5	Q04493	163 aa		3.08	□□□□□ -1.92
SPN1	YPR133C	FMP42	Q04991	504 aa		3.08	□□□□□ -1.92
SPN1	YPR133C	RAD28	Q12021	506 aa		3.08	□□□□□ -1.92
SPN1	YPR133C	AGC1	Q12482	902 aa		3.08	□□□□□ -1.92
SPN1	YPR133C	YDR157W	A0A023PZE8	133 aa		3.07	□□□□□ -1.92
SPN1	YPR133C	HTB2	P02294	131 aa		3.07	□□□□□ -1.92
SPN1	YPR133C	CPR1	P14832	162 aa	Known RBP	3.07	□□□□□ -1.92
SPN1	YPR133C	MIR1	P23641	311 aa	Known RBP	3.07	□□□□□ -1.92
SPN1	YPR133C	TRR1	P29509	319 aa	Known RBP	3.07	□□□□□ -1.92
SPN1	YPR133C	QRI5	P32344	111 aa		3.07	□□□□□ -1.92
SPN1	YPR133C	KTI12	P34253	313 aa	Known RBP	3.07	□□□□□ -1.92
SPN1	YPR133C	POR2	P40478	281 aa		3.07	□□□□□ -1.92
SPN1	YPR133C	IRC18	P47056	224 aa		3.07	□□□□□ -1.92
SPN1	YPR133C	TPN1	P53099	579 aa		3.07	□□□□□ -1.92
SPN1	YPR133C	SSU72	P53538	206 aa	Predicted RBP	3.07	□□□□□ -1.92
SPN1	YPR133C	DIA1	P54005	336 aa		3.07	□□□□□ -1.92
SPN1	YPR133C	HAL1	Q01766	294 aa		3.07	□□□□□ -1.92
SPN1	YPR133C	MHR1	Q06630	226 aa		3.07	□□□□□ -1.92
SPN1	YPR133C	FMT1	P32785	401 aa		3.06	□□□□□ -1.92
SPN1	YPR133C	UPS2	P35200	230 aa		3.06	□□□□□ -1.92
SPN1	YPR133C	PET8	P38921	284 aa		3.06	□□□□□ -1.92
SPN1	YPR133C	PDS1	P40316	373 aa	Predicted RBP	3.06	□□□□□ -1.92
SPN1	YPR133C	ARP3	P47117	449 aa	Known RBP	3.06	□□□□□ -1.92
SPN1	YPR133C	YML018C	Q03730	393 aa		3.06	□□□□□ -1.92
SPN1	YPR133C	DPP1	Q05521	289 aa		3.06	□□□□□ -1.92
SPN1	YPR133C	FEX1	Q08913	375 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 94.2 ms