RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W PAC10P48363 199 aa0.52□□□□□ -2.33
VAM3YOR106W CWC21Q03375 135 aaKnown RBP0.52□□□□□ -2.33
VAM3YOR106W KIN28P06242 306 aa0.51□□□□□ -2.33
VAM3YOR106W YKR041WP36134 250 aa0.51□□□□□ -2.33
VAM3YOR106W HFA1P32874 2273 aa0.5□□□□□ -2.33
VAM3YOR106W RAD6P06104 172 aa0.5□□□□□ -2.33
VAM3YOR106W HHY1P39982 102 aa0.5□□□□□ -2.33
VAM3YOR106W YGR269WP40326 108 aa0.5□□□□□ -2.33
VAM3YOR106W TTI2P47168 421 aa0.5□□□□□ -2.33
VAM3YOR106W HPT1Q04178 221 aaKnown RBP0.5□□□□□ -2.33
VAM3YOR106W PRM3Q08931 133 aa0.5□□□□□ -2.33
VAM3YOR106W NVJ1P38881 321 aa0.49□□□□□ -2.33
VAM3YOR106W YEL073CP39974 107 aa0.48□□□□□ -2.33
VAM3YOR106W APS3P47064 194 aa0.48□□□□□ -2.33
VAM3YOR106W SOL1P50278 321 aa0.48□□□□□ -2.33
VAM3YOR106W NQM1P53228 333 aaPredicted RBP0.48□□□□□ -2.33
VAM3YOR106W VAM10Q08474 114 aa0.48□□□□□ -2.33
VAM3YOR106W APA2P22108 325 aa0.47□□□□□ -2.33
VAM3YOR106W GLC8P41818 229 aa0.47□□□□□ -2.33
VAM3YOR106W JAC1P53193 184 aa0.47□□□□□ -2.33
VAM3YOR106W SNO1Q03144 224 aa0.47□□□□□ -2.33
VAM3YOR106W TRM3Q07527 1436 aa0.47□□□□□ -2.33
VAM3YOR106W RPS25BP0C0T4 108 aaKnown RBP0.46□□□□□ -2.34
VAM3YOR106W NUF2P33895 451 aa0.46□□□□□ -2.34
VAM3YOR106W XPT1P47165 209 aa0.46□□□□□ -2.34
VAM3YOR106W GEP7P53171 287 aa0.46□□□□□ -2.34
VAM3YOR106W YET3Q07451 203 aa0.46□□□□□ -2.34
VAM3YOR106W RPS25AQ3E792 108 aaPredicted RBP0.46□□□□□ -2.34
VAM3YOR106W TAF2P23255 1407 aa0.46□□□□□ -2.34
VAM3YOR106W SPS2P08459 502 aa0.45□□□□□ -2.34
VAM3YOR106W GLR1P41921 483 aaKnown RBP0.45□□□□□ -2.34
VAM3YOR106W GRX3Q03835 250 aa0.44□□□□□ -2.34
VAM3YOR106W INO4P13902 151 aa0.43□□□□□ -2.34
VAM3YOR106W HOP2P53187 214 aa0.43□□□□□ -2.34
VAM3YOR106W CCC1P47818 322 aa0.42□□□□□ -2.34
VAM3YOR106W SYM1Q06563 197 aa0.42□□□□□ -2.34
VAM3YOR106W ATP7P30902 174 aa0.41□□□□□ -2.34
VAM3YOR106W SPT14P32363 452 aa0.41□□□□□ -2.34
VAM3YOR106W ATG8P38182 117 aaRIP-Chip data0.41□□□□□ -2.34not detected
VAM3YOR106W CSH1P38287 376 aa0.41□□□□□ -2.34
VAM3YOR106W YEL028WP39989 153 aa0.41□□□□□ -2.34
VAM3YOR106W YNL122CP53921 115 aaPredicted RBP0.41□□□□□ -2.34
VAM3YOR106W YDL241WQ07738 123 aa0.41□□□□□ -2.34
VAM3YOR106W ATG10Q07879 167 aa0.41□□□□□ -2.34
VAM3YOR106W YOR072WQ08486 104 aa0.41□□□□□ -2.34
VAM3YOR106W TRR1P29509 319 aaKnown RBP0.4□□□□□ -2.35
VAM3YOR106W YBR027CP38220 110 aa0.4□□□□□ -2.35
VAM3YOR106W LIP1Q03579 150 aa0.4□□□□□ -2.35
VAM3YOR106W YPR114WQ06107 315 aa0.4□□□□□ -2.35
VAM3YOR106W UIP4Q08926 304 aa0.4□□□□□ -2.35
VAM3YOR106W RIB3Q99258 208 aa0.4□□□□□ -2.35
VAM3YOR106W ROM2P51862 1356 aaKnown RBP0.39□□□□□ -2.35
VAM3YOR106W RAD51P25454 400 aa0.38□□□□□ -2.35
VAM3YOR106W YPT31P38555 223 aaKnown RBP0.38□□□□□ -2.35
VAM3YOR106W HSK3P69852 69 aa0.38□□□□□ -2.35
VAM3YOR106W MGR2Q02889 113 aa0.38□□□□□ -2.35
VAM3YOR106W YDR102CQ03864 110 aa0.38□□□□□ -2.35
VAM3YOR106W THI74Q04083 370 aa0.38□□□□□ -2.35
VAM3YOR106W YLR050CQ12155 161 aaKnown RBP0.38□□□□□ -2.35
VAM3YOR106W PEX11Q12462 236 aa0.38□□□□□ -2.35
VAM3YOR106W CMC4Q3E7A9 73 aa0.38□□□□□ -2.35
VAM3YOR106W RPS22AP0C0W1 130 aaKnown RBP0.36□□□□□ -2.35
VAM3YOR106W PTC1P35182 281 aa0.36□□□□□ -2.35
VAM3YOR106W SRP102P36057 244 aaPredicted RBP0.36□□□□□ -2.35
VAM3YOR106W YEL014CP39999 101 aa0.36□□□□□ -2.35
VAM3YOR106W PLP1Q04004 230 aa0.36□□□□□ -2.35
VAM3YOR106W GRE1Q08969 168 aa0.36□□□□□ -2.35
VAM3YOR106W RPS22BQ3E7Y3 130 aaKnown RBP0.36□□□□□ -2.35
VAM3YOR106W CDC39P25655 2108 aaKnown RBP0.35□□□□□ -2.35
VAM3YOR106W HAP2P06774 265 aa0.35□□□□□ -2.35
VAM3YOR106W YIP3P53633 176 aa0.35□□□□□ -2.35
VAM3YOR106W YNR064CP53750 290 aa0.35□□□□□ -2.35
VAM3YOR106W SEN15Q04675 128 aa0.35□□□□□ -2.35
VAM3YOR106W SEC72P39742 193 aaKnown RBP0.34□□□□□ -2.36
VAM3YOR106W RPL43AP0CX25 92 aaKnown RBP0.33□□□□□ -2.36
VAM3YOR106W RPL43BP0CX26 92 aa0.33□□□□□ -2.36
VAM3YOR106W EGD2P38879 174 aaKnown RBP0.33□□□□□ -2.36
VAM3YOR106W YMR141CP40211 102 aa0.33□□□□□ -2.36
VAM3YOR106W YNL140CP53910 189 aa0.33□□□□□ -2.36
VAM3YOR106W RPL35AP0CX84 120 aaKnown RBP0.32□□□□□ -2.36
VAM3YOR106W RPL35BP0CX85 120 aaKnown RBP0.32□□□□□ -2.36
VAM3YOR106W MRS4P23500 304 aa0.32□□□□□ -2.36
VAM3YOR106W HSP150P32478 413 aa0.32□□□□□ -2.36
VAM3YOR106W ECM31P38122 312 aa0.32□□□□□ -2.36
VAM3YOR106W ADE6P38972 1358 aaKnown RBP0.32□□□□□ -2.36
VAM3YOR106W CMD1P06787 147 aaKnown RBP0.31□□□□□ -2.36
VAM3YOR106W HYP2P23301 157 aaKnown RBP0.31□□□□□ -2.36
VAM3YOR106W YHR140WP38842 239 aa0.31□□□□□ -2.36
VAM3YOR106W DIE2P50076 525 aa0.31□□□□□ -2.36
VAM3YOR106W GIM3P53900 129 aa0.31□□□□□ -2.36
VAM3YOR106W NMA1Q06178 401 aaKnown RBP0.31□□□□□ -2.36
VAM3YOR106W ATP5P09457 212 aa0.3□□□□□ -2.36
VAM3YOR106W SRP21P32342 167 aa0.3□□□□□ -2.36
VAM3YOR106W UBC6P33296 250 aaPredicted RBP0.3□□□□□ -2.36
VAM3YOR106W IPT1P38954 527 aa0.3□□□□□ -2.36
VAM3YOR106W YLR307C-AQ3E825 87 aa0.3□□□□□ -2.36
VAM3YOR106W SRP14P38985 146 aa0.29□□□□□ -2.36
VAM3YOR106W YGL101WP53144 215 aa0.29□□□□□ -2.36
VAM3YOR106W ORM1P53224 222 aa0.29□□□□□ -2.36
VAM3YOR106W TMA20P89886 181 aaPredicted RBP0.29□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms