RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W CDC7P06243 507 aa7.96□□□□□ -1.14
PRE6YOL038W SIP1P32578 815 aa7.96□□□□□ -1.14
PRE6YOL038W EMC5P40540 141 aa7.96□□□□□ -1.14
PRE6YOL038W RTS2P40962 232 aa7.96□□□□□ -1.14
PRE6YOL038W CAF16P43569 289 aa7.96□□□□□ -1.14
PRE6YOL038W IMP2P46972 177 aa7.96□□□□□ -1.14
PRE6YOL038W YJR015WP47090 510 aa7.96□□□□□ -1.14
PRE6YOL038W RRG8Q06109 277 aa7.96□□□□□ -1.14
PRE6YOL038W PRR2Q12310 699 aa7.96□□□□□ -1.14
PRE6YOL038W YOR011W-AQ3E807 68 aa7.96□□□□□ -1.14
PRE6YOL038W PRE9P23638 258 aaKnown RBP7.95□□□□□ -1.14
PRE6YOL038W EMP24P32803 203 aaKnown RBP7.95□□□□□ -1.14
PRE6YOL038W VMA7P39111 118 aa7.95□□□□□ -1.14
PRE6YOL038W YGR269WP40326 108 aa7.95□□□□□ -1.14
PRE6YOL038W FYV6P53913 173 aa7.95□□□□□ -1.14
PRE6YOL038W YDL242WQ07746 117 aa7.95□□□□□ -1.14
PRE6YOL038W LDS2Q08218 356 aa7.95□□□□□ -1.14
PRE6YOL038W FMP16Q12497 93 aa7.95□□□□□ -1.14
PRE6YOL038W MLF3P32047 452 aa7.94□□□□□ -1.14
PRE6YOL038W YBR292CP38357 123 aa7.94□□□□□ -1.14
PRE6YOL038W ORM1P53224 222 aa7.94□□□□□ -1.14
PRE6YOL038W PRM7Q12459 698 aa7.94□□□□□ -1.14
PRE6YOL038W YDR157WA0A023PZE8 133 aa7.93□□□□□ -1.14
PRE6YOL038W ZRC1P20107 442 aa7.93□□□□□ -1.14
PRE6YOL038W FPR2P32472 135 aa7.93□□□□□ -1.14
PRE6YOL038W SHB17P36136 271 aaKnown RBP7.93□□□□□ -1.14
PRE6YOL038W SNF11P38956 169 aa7.93□□□□□ -1.14
PRE6YOL038W GNP1P48813 663 aa7.93□□□□□ -1.14
PRE6YOL038W PHO23P50947 330 aa7.93□□□□□ -1.14
PRE6YOL038W COX12Q01519 83 aa7.93□□□□□ -1.14
PRE6YOL038W ACP1P32463 125 aa7.92□□□□□ -1.14
PRE6YOL038W SHG1P38337 142 aa7.92□□□□□ -1.14
PRE6YOL038W PTC7P38797 343 aa7.92□□□□□ -1.14
PRE6YOL038W YCL001W-AP87012 153 aa7.92□□□□□ -1.14
PRE6YOL038W ARR3Q06598 404 aa7.92□□□□□ -1.14
PRE6YOL038W AYT1Q12226 474 aa7.92□□□□□ -1.14
PRE6YOL038W DFR1P07807 211 aaKnown RBP RIP-Chip data7.91□□□□□ -1.14not detected
PRE6YOL038W SPO13P23624 291 aa7.91□□□□□ -1.14
PRE6YOL038W ATG27P46989 271 aa7.91□□□□□ -1.14
PRE6YOL038W MIC27P50945 234 aa7.91□□□□□ -1.14
PRE6YOL038W HST4P53688 370 aa7.91□□□□□ -1.14
PRE6YOL038W YDR215CQ12240 137 aa7.91□□□□□ -1.14
PRE6YOL038W QCR9P22289 66 aa7.9□□□□□ -1.14
PRE6YOL038W CMC1P36064 111 aa7.9□□□□□ -1.14
PRE6YOL038W GPI2P46961 280 aa7.9□□□□□ -1.14
PRE6YOL038W UBC12P52491 188 aa7.9□□□□□ -1.14
PRE6YOL038W BOR1P53838 576 aa7.9□□□□□ -1.14
PRE6YOL038W ODC1Q03028 310 aa7.9□□□□□ -1.14
PRE6YOL038W ADD37Q03233 198 aa7.9□□□□□ -1.14
PRE6YOL038W YMR244WQ04018 355 aa7.9□□□□□ -1.14
PRE6YOL038W SDH7Q04401 133 aa7.9□□□□□ -1.14
PRE6YOL038W SHH3Q04487 196 aa7.9□□□□□ -1.14
PRE6YOL038W YOR015WQ12169 119 aa7.9□□□□□ -1.14
PRE6YOL038W TY1A-HP0C2I4 478 aaKnown RBP7.89□□□□□ -1.15
PRE6YOL038W CDC50P25656 391 aa7.89□□□□□ -1.15
PRE6YOL038W LSM2P38203 95 aaKnown RBP7.89□□□□□ -1.15
PRE6YOL038W AIM24P47127 394 aa7.89□□□□□ -1.15
PRE6YOL038W CAF40P53829 373 aa7.89□□□□□ -1.15
PRE6YOL038W YOL160WQ08321 113 aa7.89□□□□□ -1.15
PRE6YOL038W ERS1P17261 260 aa7.88□□□□□ -1.15
PRE6YOL038W ECM25P32525 599 aa7.88□□□□□ -1.15
PRE6YOL038W SPC25P40014 221 aa7.88□□□□□ -1.15
PRE6YOL038W CTR3Q06686 241 aa7.88□□□□□ -1.15
PRE6YOL038W MSK1P32048 576 aa7.87□□□□□ -1.15
PRE6YOL038W RIB4P50861 169 aaPredicted RBP7.87□□□□□ -1.15
PRE6YOL038W YIP3P53633 176 aa7.87□□□□□ -1.15
PRE6YOL038W TMA23Q03525 211 aa7.87□□□□□ -1.15
PRE6YOL038W AHT1P29589 182 aa7.86□□□□□ -1.15
PRE6YOL038W YBL059WP34224 193 aa7.86□□□□□ -1.15
PRE6YOL038W RIB5P38145 238 aa7.86□□□□□ -1.15
PRE6YOL038W SFT2P38166 215 aa7.86□□□□□ -1.15
PRE6YOL038W DER1P38307 211 aa7.86□□□□□ -1.15
PRE6YOL038W SAS2P40963 338 aa7.86□□□□□ -1.15
PRE6YOL038W SNN1P48232 102 aa7.86□□□□□ -1.15
PRE6YOL038W YMR007WQ03675 126 aa7.86□□□□□ -1.15
PRE6YOL038W IZH3Q07959 543 aa7.86□□□□□ -1.15
PRE6YOL038W YNL146C-AQ3E7Z1 64 aa7.86□□□□□ -1.15
PRE6YOL038W MIG3P39943 394 aa7.85□□□□□ -1.15
PRE6YOL038W YER135CP40082 130 aa7.85□□□□□ -1.15
PRE6YOL038W SMD3P43321 101 aaKnown RBP7.85□□□□□ -1.15
PRE6YOL038W FMP41P53889 259 aaKnown RBP7.85□□□□□ -1.15
PRE6YOL038W ATC1Q04005 294 aa7.85□□□□□ -1.15
PRE6YOL038W SME1Q12330 94 aaPredicted RBP7.85□□□□□ -1.15
PRE6YOL038W PET100P38958 111 aa7.84□□□□□ -1.15
PRE6YOL038W YFR035CP43608 114 aa7.84□□□□□ -1.15
PRE6YOL038W MRPS8Q03799 155 aa7.84□□□□□ -1.15
PRE6YOL038W AVO2Q04749 426 aa7.84□□□□□ -1.15
PRE6YOL038W COX19Q3E731 98 aa7.84□□□□□ -1.15
PRE6YOL038W YIL077CP40508 320 aa7.83□□□□□ -1.16
PRE6YOL038W MCM22P47167 239 aa7.82□□□□□ -1.16
PRE6YOL038W YNR071CP53757 342 aa7.82□□□□□ -1.16
PRE6YOL038W IZH1Q03419 316 aa7.82□□□□□ -1.16
PRE6YOL038W ATP14Q12349 124 aa7.82□□□□□ -1.16
PRE6YOL038W RPS2P25443 254 aaKnown RBP7.81□□□□□ -1.16
PRE6YOL038W SRB6P32570 121 aa7.81□□□□□ -1.16
PRE6YOL038W RPL14AP36105 138 aaKnown RBP7.81□□□□□ -1.16
PRE6YOL038W RPL14BP38754 138 aaKnown RBP7.81□□□□□ -1.16
PRE6YOL038W PAU4P53427 120 aa7.81□□□□□ -1.16
PRE6YOL038W UBC7Q02159 165 aa7.81□□□□□ -1.16
PRE6YOL038W HSP12P22943 109 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 77.7 ms