RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W PIS1P06197 220 aaKnown RBP4.79□□□□□ -1.64
CAF40YNL288W QCR9P22289 66 aa4.79□□□□□ -1.64
CAF40YNL288W YCR025CP25352 136 aa4.79□□□□□ -1.64
CAF40YNL288W SIP1P32578 815 aa4.79□□□□□ -1.64
CAF40YNL288W EMP24P32803 203 aaKnown RBP4.79□□□□□ -1.64
CAF40YNL288W SHB17P36136 271 aaKnown RBP4.79□□□□□ -1.64
CAF40YNL288W MIC12P38341 106 aa4.79□□□□□ -1.64
CAF40YNL288W VMA22P38784 181 aa4.79□□□□□ -1.64
CAF40YNL288W YJR015WP47090 510 aa4.79□□□□□ -1.64
CAF40YNL288W MIC27P50945 234 aa4.79□□□□□ -1.64
CAF40YNL288W YGR018CP53211 109 aa4.79□□□□□ -1.64
CAF40YNL288W CPD1P53314 239 aa4.79□□□□□ -1.64
CAF40YNL288W CAB4P53332 305 aa4.79□□□□□ -1.64
CAF40YNL288W BOR1P53838 576 aa4.79□□□□□ -1.64
CAF40YNL288W YHP1Q04116 353 aa4.79□□□□□ -1.64
CAF40YNL288W YDL242WQ07746 117 aa4.79□□□□□ -1.64
CAF40YNL288W IRC23Q08416 157 aa4.79□□□□□ -1.64
CAF40YNL288W YCR022CP25620 114 aa4.78□□□□□ -1.64
CAF40YNL288W AVT5P38176 459 aa4.78□□□□□ -1.64
CAF40YNL288W CSH1P38287 376 aa4.78□□□□□ -1.64
CAF40YNL288W AGE2P40529 298 aa4.78□□□□□ -1.64
CAF40YNL288W SAS2P40963 338 aa4.78□□□□□ -1.64
CAF40YNL288W SNX4P47057 423 aa4.78□□□□□ -1.64
CAF40YNL288W ORM1P53224 222 aa4.78□□□□□ -1.64
CAF40YNL288W SWT21P53873 357 aaPredicted RBP4.78□□□□□ -1.64
CAF40YNL288W SDH7Q04401 133 aa4.78□□□□□ -1.64
CAF40YNL288W POS5Q06892 414 aa4.78□□□□□ -1.64
CAF40YNL288W YNL162W-AQ3E7A8 72 aa4.78□□□□□ -1.64
CAF40YNL288W POP5P28005 173 aa4.77□□□□□ -1.65
CAF40YNL288W SHG1P38337 142 aa4.77□□□□□ -1.65
CAF40YNL288W YPI1P43587 155 aa4.77□□□□□ -1.65
CAF40YNL288W LST7P53237 242 aa4.77□□□□□ -1.65
CAF40YNL288W SHH3Q04487 196 aa4.77□□□□□ -1.65
CAF40YNL288W ARR3Q06598 404 aa4.77□□□□□ -1.65
CAF40YNL288W STP4Q07351 490 aa4.77□□□□□ -1.65
CAF40YNL288W TIM18Q08749 192 aa4.77□□□□□ -1.65
CAF40YNL288W TDH1P00360 332 aaKnown RBP4.76□□□□□ -1.65
CAF40YNL288W CYC3P06182 269 aa4.76□□□□□ -1.65
CAF40YNL288W CDC7P06243 507 aa4.76□□□□□ -1.65
CAF40YNL288W AHT1P29589 182 aa4.76□□□□□ -1.65
CAF40YNL288W UTR5P32630 166 aa4.76□□□□□ -1.65
CAF40YNL288W YBR144CP34215 104 aa4.76□□□□□ -1.65
CAF40YNL288W YBL059WP34224 193 aa4.76□□□□□ -1.65
CAF40YNL288W POR2P40478 281 aa4.76□□□□□ -1.65
CAF40YNL288W EMC5P40540 141 aa4.76□□□□□ -1.65
CAF40YNL288W RTS2P40962 232 aa4.76□□□□□ -1.65
CAF40YNL288W RIB4P50861 169 aaPredicted RBP4.76□□□□□ -1.65
CAF40YNL288W HST4P53688 370 aa4.76□□□□□ -1.65
CAF40YNL288W CAF40P53829 373 aa4.76□□□□□ -1.65
CAF40YNL288W YCL001W-AP87012 153 aa4.76□□□□□ -1.65
CAF40YNL288W ODC1Q03028 310 aa4.76□□□□□ -1.65
CAF40YNL288W YBR298C-AQ8TGK4 73 aa4.76□□□□□ -1.65
CAF40YNL288W YMR316C-AI2HB70 103 aa4.75□□□□□ -1.65
CAF40YNL288W YBR085C-AO43137 85 aa4.75□□□□□ -1.65
CAF40YNL288W YHR212W-AP0CX91 67 aa4.75□□□□□ -1.65
CAF40YNL288W ZRC1P20107 442 aa4.75□□□□□ -1.65
CAF40YNL288W SPO13P23624 291 aa4.75□□□□□ -1.65
CAF40YNL288W ALK2P32789 676 aaPredicted RBP4.75□□□□□ -1.65
CAF40YNL288W VMA7P39111 118 aa4.75□□□□□ -1.65
CAF40YNL288W YJL027CP47063 138 aaPredicted RBP4.75□□□□□ -1.65
CAF40YNL288W YMR181CQ03231 154 aa4.75□□□□□ -1.65
CAF40YNL288W COA4Q05809 96 aa4.75□□□□□ -1.65
CAF40YNL288W CTR3Q06686 241 aa4.75□□□□□ -1.65
CAF40YNL288W COX2P00410 251 aa4.74□□□□□ -1.65
CAF40YNL288W DFR1P07807 211 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
CAF40YNL288W CDC50P25656 391 aa4.74□□□□□ -1.65
CAF40YNL288W ELF1P36053 145 aa4.74□□□□□ -1.65
CAF40YNL288W DER1P38307 211 aa4.74□□□□□ -1.65
CAF40YNL288W PET100P38958 111 aa4.74□□□□□ -1.65
CAF40YNL288W SPC25P40014 221 aa4.74□□□□□ -1.65
CAF40YNL288W SMD3P43321 101 aaKnown RBP4.74□□□□□ -1.65
CAF40YNL288W UBC12P52491 188 aa4.74□□□□□ -1.65
CAF40YNL288W YNR071CP53757 342 aa4.74□□□□□ -1.65
CAF40YNL288W YMR007WQ03675 126 aa4.74□□□□□ -1.65
CAF40YNL288W IZH3Q07959 543 aa4.74□□□□□ -1.65
CAF40YNL288W LDS2Q08218 356 aa4.74□□□□□ -1.65
CAF40YNL288W YOR015WQ12169 119 aa4.74□□□□□ -1.65
CAF40YNL288W FMP16Q12497 93 aa4.74□□□□□ -1.65
CAF40YNL288W COX19Q3E731 98 aa4.74□□□□□ -1.65
CAF40YNL288W YHR213WP0CI67 198 aa4.73□□□□□ -1.65
CAF40YNL288W MIG1P27705 504 aa4.73□□□□□ -1.65
CAF40YNL288W SFT2P38166 215 aa4.73□□□□□ -1.65
CAF40YNL288W IMD2P38697 523 aaKnown RBP4.73□□□□□ -1.65
CAF40YNL288W IMP2P46972 177 aa4.73□□□□□ -1.65
CAF40YNL288W ATG27P46989 271 aa4.73□□□□□ -1.65
CAF40YNL288W ERV25P54837 211 aaKnown RBP4.73□□□□□ -1.65
CAF40YNL288W ADD37Q03233 198 aa4.73□□□□□ -1.65
CAF40YNL288W ATC1Q04005 294 aa4.73□□□□□ -1.65
CAF40YNL288W AVO2Q04749 426 aa4.73□□□□□ -1.65
CAF40YNL288W ELO2P25358 347 aa4.72□□□□□ -1.65
CAF40YNL288W SNF11P38956 169 aa4.72□□□□□ -1.65
CAF40YNL288W SNU13P39990 126 aaKnown RBP4.72□□□□□ -1.65
CAF40YNL288W SYG1P40528 902 aa4.72□□□□□ -1.65
CAF40YNL288W TMA23Q03525 211 aa4.72□□□□□ -1.65
CAF40YNL288W RRG8Q06109 277 aa4.72□□□□□ -1.65
CAF40YNL288W ATG39Q06159 398 aa4.72□□□□□ -1.65
CAF40YNL288W AYT1Q12226 474 aa4.72□□□□□ -1.65
CAF40YNL288W MSK1P32048 576 aa4.71□□□□□ -1.66
CAF40YNL288W FLO5P38894 1075 aa4.71□□□□□ -1.66
CAF40YNL288W MRPL49P40858 161 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms