RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT21	YMR179W	ATP5	P09457	212 aa		0.68	□□□□□ -2.3
SPT21	YMR179W	RPL30	P14120	105 aa	Known RBP	0.68	□□□□□ -2.3
SPT21	YMR179W	RPB7	P34087	171 aa		0.68	□□□□□ -2.3
SPT21	YMR179W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.68	□□□□□ -2.3	not detected
SPT21	YMR179W	MPM1	P40364	252 aa		0.68	□□□□□ -2.3
SPT21	YMR179W	DLS1	P40366	167 aa		0.68	□□□□□ -2.3
SPT21	YMR179W	APQ12	P40532	138 aa		0.68	□□□□□ -2.3
SPT21	YMR179W	YAE1	P47118	141 aa	Predicted RBP	0.68	□□□□□ -2.3
SPT21	YMR179W	PAC10	P48363	199 aa		0.68	□□□□□ -2.3
SPT21	YMR179W	NQM1	P53228	333 aa	Predicted RBP	0.68	□□□□□ -2.3
SPT21	YMR179W	HHT1	P61830	136 aa		0.68	□□□□□ -2.3
SPT21	YMR179W	CWC27	Q02770	301 aa		0.68	□□□□□ -2.3
SPT21	YMR179W	STF2	P16965	84 aa		0.68	□□□□□ -2.3
SPT21	YMR179W	MAK31	P23059	88 aa		0.68	□□□□□ -2.3
SPT21	YMR179W	YHL042W	P38729	150 aa		0.68	□□□□□ -2.3
SPT21	YMR179W	HTD2	P38790	280 aa	Known RBP	0.68	□□□□□ -2.3
SPT21	YMR179W	FIP1	P45976	327 aa		0.68	□□□□□ -2.3
SPT21	YMR179W	CCC1	P47818	322 aa		0.68	□□□□□ -2.3
SPT21	YMR179W	LIP1	Q03579	150 aa		0.68	□□□□□ -2.3
SPT21	YMR179W	UPS3	Q04006	179 aa		0.68	□□□□□ -2.3
SPT21	YMR179W	YMR252C	Q04814	134 aa		0.68	□□□□□ -2.3
SPT21	YMR179W	PET54	P10834	293 aa		0.67	□□□□□ -2.3
SPT21	YMR179W	CCS1	P40202	249 aa	Known RBP	0.67	□□□□□ -2.3
SPT21	YMR179W	MOG1	P47123	218 aa		0.67	□□□□□ -2.3
SPT21	YMR179W	UBC7	Q02159	165 aa		0.67	□□□□□ -2.3
SPT21	YMR179W	MZM1	Q03429	123 aa	Predicted RBP	0.67	□□□□□ -2.3
SPT21	YMR179W	YDR102C	Q03864	110 aa		0.67	□□□□□ -2.3
SPT21	YMR179W	ELP6	Q04868	273 aa		0.67	□□□□□ -2.3
SPT21	YMR179W	UBC8	P28263	218 aa		0.67	□□□□□ -2.3
SPT21	YMR179W	YBL010C	P32788	280 aa		0.67	□□□□□ -2.3
SPT21	YMR179W	SRP102	P36057	244 aa	Predicted RBP	0.67	□□□□□ -2.3
SPT21	YMR179W	YEL067C	P39978	195 aa		0.67	□□□□□ -2.3
SPT21	YMR179W	YEL008W	P40001	126 aa		0.67	□□□□□ -2.3
SPT21	YMR179W	MOB1	P40484	314 aa		0.67	□□□□□ -2.3
SPT21	YMR179W	YFL065C	P43539	102 aa		0.67	□□□□□ -2.3
SPT21	YMR179W	YGL193C	P53097	103 aa		0.67	□□□□□ -2.3
SPT21	YMR179W	YDR391C	Q04170	232 aa		0.67	□□□□□ -2.3
SPT21	YMR179W	YPR114W	Q06107	315 aa		0.67	□□□□□ -2.3
SPT21	YMR179W	ATG10	Q07879	167 aa		0.67	□□□□□ -2.3
SPT21	YMR179W	HRD1	Q08109	551 aa		0.67	□□□□□ -2.3
SPT21	YMR179W	YMR030W-A	Q3E760	96 aa		0.67	□□□□□ -2.3
SPT21	YMR179W	SPS2	P08459	502 aa		0.66	□□□□□ -2.3
SPT21	YMR179W	SEN2	P16658	377 aa		0.66	□□□□□ -2.3
SPT21	YMR179W	YPT31	P38555	223 aa	Known RBP	0.66	□□□□□ -2.3
SPT21	YMR179W	YER181C	P40097	107 aa		0.66	□□□□□ -2.3
SPT21	YMR179W	YNR064C	P53750	290 aa		0.66	□□□□□ -2.3
SPT21	YMR179W	YDC1	Q02896	317 aa		0.66	□□□□□ -2.3
SPT21	YMR179W	MET31	Q03081	177 aa		0.66	□□□□□ -2.3
SPT21	YMR179W	YML079W	Q03629	201 aa		0.66	□□□□□ -2.3
SPT21	YMR179W	PKR1	Q03880	122 aa	Known RBP	0.66	□□□□□ -2.3
SPT21	YMR179W	UIP4	Q08926	304 aa		0.66	□□□□□ -2.3
SPT21	YMR179W	FAS1	P07149	2051 aa	Known RBP	0.66	□□□□□ -2.3
SPT21	YMR179W	YLR422W	Q06409	1932 aa		0.66	□□□□□ -2.3
SPT21	YMR179W	ETR1	P38071	380 aa		0.66	□□□□□ -2.3
SPT21	YMR179W	IPI1	P38803	334 aa	Predicted RBP	0.66	□□□□□ -2.3
SPT21	YMR179W	YGR269W	P40326	108 aa		0.66	□□□□□ -2.3
SPT21	YMR179W	LSM1	P47017	172 aa	Known RBP	0.66	□□□□□ -2.3
SPT21	YMR179W	YPD1	Q07688	167 aa		0.66	□□□□□ -2.3
SPT21	YMR179W	YDL241W	Q07738	123 aa		0.66	□□□□□ -2.3
SPT21	YMR179W	COA3	Q3E7B2	85 aa		0.66	□□□□□ -2.3
SPT21	YMR179W	TAR1	Q8TGM6	124 aa		0.66	□□□□□ -2.3
SPT21	YMR179W	AQY2	P0CD90	149 aa		0.65	□□□□□ -2.31
SPT21	YMR179W	INO4	P13902	151 aa		0.65	□□□□□ -2.31
SPT21	YMR179W	MRS4	P23500	304 aa		0.65	□□□□□ -2.31
SPT21	YMR179W	YCL042W	P25572	119 aa		0.65	□□□□□ -2.31
SPT21	YMR179W	MRPL24	P36525	258 aa	Predicted RBP	0.65	□□□□□ -2.31
SPT21	YMR179W	SOK1	P40317	901 aa		0.65	□□□□□ -2.31
SPT21	YMR179W	YJL218W	P40892	196 aa	Known RBP	0.65	□□□□□ -2.31
SPT21	YMR179W	YJR015W	P47090	510 aa		0.65	□□□□□ -2.31
SPT21	YMR179W	RAV2	Q03956	351 aa		0.65	□□□□□ -2.31
SPT21	YMR179W	CYR1	P08678	2026 aa	Known RBP	0.65	□□□□□ -2.31
SPT21	YMR179W	PHO13	P19881	312 aa		0.64	□□□□□ -2.31
SPT21	YMR179W	SPT14	P32363	452 aa		0.64	□□□□□ -2.31
SPT21	YMR179W	YMR320W	Q04897	101 aa		0.64	□□□□□ -2.31
SPT21	YMR179W	YDL157C	Q12082	118 aa		0.64	□□□□□ -2.31
SPT21	YMR179W	RPS25B	P0C0T4	108 aa	Known RBP	0.64	□□□□□ -2.31
SPT21	YMR179W	YAP3	P38749	330 aa		0.64	□□□□□ -2.31
SPT21	YMR179W	CIN5	P40917	295 aa		0.64	□□□□□ -2.31
SPT21	YMR179W	AVO2	Q04749	426 aa		0.64	□□□□□ -2.31
SPT21	YMR179W	RPS25A	Q3E792	108 aa	Predicted RBP	0.64	□□□□□ -2.31
SPT21	YMR179W	UBR2	Q07963	1872 aa		0.64	□□□□□ -2.31
SPT21	YMR179W	YOR1	P53049	1477 aa		0.63	□□□□□ -2.31
SPT21	YMR179W	DUR1,2	P32528	1835 aa	Known RBP	0.63	□□□□□ -2.31
SPT21	YMR179W	ADE6	P38972	1358 aa	Known RBP	0.63	□□□□□ -2.31
SPT21	YMR179W	YHR212W-A	P0CX91	67 aa		0.63	□□□□□ -2.31
SPT21	YMR179W	DDR48	P18899	430 aa	Known RBP	0.63	□□□□□ -2.31
SPT21	YMR179W	SRP21	P32342	167 aa		0.63	□□□□□ -2.31
SPT21	YMR179W	YBR242W	P38331	238 aa		0.63	□□□□□ -2.31
SPT21	YMR179W	GEP7	P53171	287 aa		0.63	□□□□□ -2.31
SPT21	YMR179W	RFU1	Q08003	200 aa		0.63	□□□□□ -2.31
SPT21	YMR179W	SPA2	P23201	1466 aa	Known RBP	0.63	□□□□□ -2.31
SPT21	YMR179W	HSP12	P22943	109 aa	Known RBP	0.63	□□□□□ -2.31
SPT21	YMR179W	AHT1	P29589	182 aa		0.63	□□□□□ -2.31
SPT21	YMR179W	MRPL15	P36523	253 aa		0.63	□□□□□ -2.31
SPT21	YMR179W	FMN1	Q03778	218 aa		0.63	□□□□□ -2.31
SPT21	YMR179W	RRT7	Q07829	113 aa		0.63	□□□□□ -2.31
SPT21	YMR179W	VAR1	P02381	398 aa		0.62	□□□□□ -2.31
SPT21	YMR179W	YGR201C	P42936	225 aa		0.62	□□□□□ -2.31
SPT21	YMR179W	RBL2	P48606	106 aa	Known RBP	0.62	□□□□□ -2.31
SPT21	YMR179W	RCF2	P53721	224 aa		0.62	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 156.4 ms