RNA–Protein interactions for RNA: YML031W

NDC1, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeast

Gene NDC1, Length 1,968 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDC1	YML031W	OCH1	P31755	480 aa		4.16	□□□□□ -1.74
NDC1	YML031W	PMU1	P36069	295 aa		4.16	□□□□□ -1.74
NDC1	YML031W	RTC3	P38804	111 aa	Predicted RBP	4.16	□□□□□ -1.74
NDC1	YML031W	POP2	P39008	433 aa		4.16	□□□□□ -1.74
NDC1	YML031W	NSA2	P40078	261 aa	Known RBP	4.16	□□□□□ -1.74
NDC1	YML031W	RPA43	P46669	326 aa		4.16	□□□□□ -1.74
NDC1	YML031W	ATG27	P46989	271 aa		4.16	□□□□□ -1.74
NDC1	YML031W	RPA34	P47006	233 aa	Predicted RBP	4.16	□□□□□ -1.74
NDC1	YML031W	HSK3	P69852	69 aa		4.16	□□□□□ -1.74
NDC1	YML031W	MIX17	Q03667	156 aa		4.16	□□□□□ -1.74
NDC1	YML031W	DAL4	Q04895	635 aa		4.16	□□□□□ -1.74
NDC1	YML031W	FCY1	Q12178	158 aa		4.16	□□□□□ -1.74
NDC1	YML031W	ATO3	Q12359	275 aa		4.16	□□□□□ -1.74
NDC1	YML031W	ADE8	P04161	214 aa		4.16	□□□□□ -1.74
NDC1	YML031W	NHP6A	P11632	93 aa	Known RBP	4.16	□□□□□ -1.74
NDC1	YML031W	AHT1	P29589	182 aa		4.16	□□□□□ -1.74
NDC1	YML031W	MRPL11	P36521	249 aa	Predicted RBP	4.16	□□□□□ -1.74
NDC1	YML031W	CCS1	P40202	249 aa	Known RBP	4.16	□□□□□ -1.74
NDC1	YML031W	YFL054C	P43549	646 aa		4.16	□□□□□ -1.74
NDC1	YML031W	STD1	Q02794	444 aa		4.16	□□□□□ -1.74
NDC1	YML031W	ERV2	Q12284	196 aa		4.16	□□□□□ -1.74
NDC1	YML031W	YOP1	Q12402	180 aa		4.16	□□□□□ -1.74
NDC1	YML031W	YLR365W	Q7LIF2	110 aa		4.16	□□□□□ -1.74
NDC1	YML031W	YDR157W	A0A023PZE8	133 aa		4.15	□□□□□ -1.74
NDC1	YML031W	HEM13	P11353	328 aa	Known RBP	4.15	□□□□□ -1.74
NDC1	YML031W	HSP10	P38910	106 aa		4.15	□□□□□ -1.74
NDC1	YML031W	TSA2	Q04120	196 aa		4.15	□□□□□ -1.74
NDC1	YML031W	YDR286C	Q05530	114 aa		4.15	□□□□□ -1.74
NDC1	YML031W	TRP4	P07285	380 aa	Predicted RBP	4.14	□□□□□ -1.75
NDC1	YML031W	RPS25B	P0C0T4	108 aa	Known RBP	4.14	□□□□□ -1.75
NDC1	YML031W	COQ3	P27680	312 aa		4.14	□□□□□ -1.75
NDC1	YML031W	RPB7	P34087	171 aa		4.14	□□□□□ -1.75
NDC1	YML031W	IRC22	P40006	225 aa		4.14	□□□□□ -1.75
NDC1	YML031W	YIP1	P53039	248 aa		4.14	□□□□□ -1.75
NDC1	YML031W	YGR151C	P53287	111 aa		4.14	□□□□□ -1.75
NDC1	YML031W	YNL234W	P53857	426 aa		4.14	□□□□□ -1.75
NDC1	YML031W	ATC1	Q04005	294 aa		4.14	□□□□□ -1.75
NDC1	YML031W	FYV7	Q12247	151 aa		4.14	□□□□□ -1.75
NDC1	YML031W	MRPL23	Q12487	163 aa	Predicted RBP	4.14	□□□□□ -1.75
NDC1	YML031W	RPS25A	Q3E792	108 aa	Predicted RBP	4.14	□□□□□ -1.75
NDC1	YML031W	YPR108W-A	Q3E7B3	70 aa		4.14	□□□□□ -1.75
NDC1	YML031W	YPR014C	Q6B0W2	109 aa		4.14	□□□□□ -1.75
NDC1	YML031W	HUG1	Q6Q5K6	68 aa		4.14	□□□□□ -1.75
NDC1	YML031W	INO2	P26798	304 aa		4.14	□□□□□ -1.75
NDC1	YML031W	ERV1	P27882	189 aa		4.14	□□□□□ -1.75
NDC1	YML031W	HNT2	P49775	206 aa		4.14	□□□□□ -1.75
NDC1	YML031W	LST7	P53237	242 aa		4.14	□□□□□ -1.75
NDC1	YML031W	HED1	Q03937	162 aa		4.14	□□□□□ -1.75
NDC1	YML031W	STP4	Q07351	490 aa		4.14	□□□□□ -1.75
NDC1	YML031W	YCL001W-B	Q96VH2	84 aa		4.14	□□□□□ -1.75
NDC1	YML031W	RAD23	P32628	398 aa	Known RBP	4.13	□□□□□ -1.75
NDC1	YML031W	NTC20	P38302	140 aa	Predicted RBP	4.13	□□□□□ -1.75
NDC1	YML031W	DUO1	P53168	247 aa	Known RBP	4.13	□□□□□ -1.75
NDC1	YML031W	PDR17	P53844	350 aa		4.13	□□□□□ -1.75
NDC1	YML031W	YLR179C	Q06252	201 aa	Known RBP	4.13	□□□□□ -1.75
NDC1	YML031W	YPL264C	Q08980	353 aa		4.13	□□□□□ -1.75
NDC1	YML031W	YIL002W-A	Q3E7Z5	69 aa		4.13	□□□□□ -1.75
NDC1	YML031W	ATP5	P09457	212 aa		4.13	□□□□□ -1.75
NDC1	YML031W	GAR1	P28007	205 aa	Known RBP	4.13	□□□□□ -1.75
NDC1	YML031W	PRS4	P38063	326 aa	Predicted RBP	4.13	□□□□□ -1.75
NDC1	YML031W	SWD3	P38123	315 aa		4.13	□□□□□ -1.75
NDC1	YML031W	APS2	Q00381	147 aa		4.13	□□□□□ -1.75
NDC1	YML031W	HOR7	Q05827	59 aa		4.13	□□□□□ -1.75
NDC1	YML031W	PAA1	Q12447	191 aa	Known RBP	4.13	□□□□□ -1.75
NDC1	YML031W	YBR255C-A	Q3E776	120 aa		4.13	□□□□□ -1.75
NDC1	YML031W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.13	□□□□□ -1.75
NDC1	YML031W	YHR212W-A	P0CX91	67 aa		4.12	□□□□□ -1.75
NDC1	YML031W	VMA16	P23968	213 aa		4.12	□□□□□ -1.75
NDC1	YML031W	SHB17	P36136	271 aa	Known RBP	4.12	□□□□□ -1.75
NDC1	YML031W	HIT1	P46973	164 aa		4.12	□□□□□ -1.75
NDC1	YML031W	VPS55	P47111	140 aa		4.12	□□□□□ -1.75
NDC1	YML031W	RIB4	P50861	169 aa	Predicted RBP	4.12	□□□□□ -1.75
NDC1	YML031W	DAD3	P69850	94 aa		4.12	□□□□□ -1.75
NDC1	YML031W	FRQ1	Q06389	190 aa		4.12	□□□□□ -1.75
NDC1	YML031W	PAM18	Q07914	168 aa		4.12	□□□□□ -1.75
NDC1	YML031W	YOL029C	Q08187	201 aa		4.12	□□□□□ -1.75
NDC1	YML031W	ALG6	Q12001	544 aa	Known RBP	4.12	□□□□□ -1.75
NDC1	YML031W	POM33	Q12164	279 aa		4.12	□□□□□ -1.75
NDC1	YML031W	JID1	Q12350	301 aa		4.12	□□□□□ -1.75
NDC1	YML031W	YOR192C-C	Q3E736	78 aa		4.12	□□□□□ -1.75
NDC1	YML031W	POR1	P04840	283 aa	Known RBP	4.11	□□□□□ -1.75
NDC1	YML031W	AFR1	P33304	620 aa		4.11	□□□□□ -1.75
NDC1	YML031W	YBR144C	P34215	104 aa		4.11	□□□□□ -1.75
NDC1	YML031W	YKL075C	P36083	450 aa		4.11	□□□□□ -1.75
NDC1	YML031W	YGR269W	P40326	108 aa		4.11	□□□□□ -1.75
NDC1	YML031W	LOC1	P43586	204 aa	Predicted RBP	4.11	□□□□□ -1.75
NDC1	YML031W	YJL118W	P47022	219 aa		4.11	□□□□□ -1.75
NDC1	YML031W	YOL118C	Q08259	102 aa		4.11	□□□□□ -1.75
NDC1	YML031W	FMP49	A0A023PZB3	126 aa		4.11	□□□□□ -1.75
NDC1	YML031W	URA5	P13298	226 aa	Known RBP	4.11	□□□□□ -1.75
NDC1	YML031W	QCR9	P22289	66 aa		4.11	□□□□□ -1.75
NDC1	YML031W	YGL010W	P25338	174 aa		4.11	□□□□□ -1.75
NDC1	YML031W	UIP3	P39547	235 aa		4.11	□□□□□ -1.75
NDC1	YML031W	SAE3	P89114	91 aa		4.11	□□□□□ -1.75
NDC1	YML031W	USV1	Q12132	391 aa		4.11	□□□□□ -1.75
NDC1	YML031W	RPL9A	P05738	191 aa	Known RBP	4.1	□□□□□ -1.75
NDC1	YML031W	QDR3	P38227	689 aa		4.1	□□□□□ -1.75
NDC1	YML031W	YJL213W	P40896	331 aa		4.1	□□□□□ -1.75
NDC1	YML031W	CDC40	P40968	455 aa	Predicted RBP	4.1	□□□□□ -1.75
NDC1	YML031W	GLC8	P41818	229 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms