RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W CDC7P06243 507 aa7.93□□□□□ -1.14
SHH4YLR164W PAU1P0CE88 120 aa7.93□□□□□ -1.14
SHH4YLR164W PAU14P0CE89 120 aa7.93□□□□□ -1.14
SHH4YLR164W PAU6P0CE90 120 aa7.93□□□□□ -1.14
SHH4YLR164W PAU18P0CE91 120 aa7.93□□□□□ -1.14
SHH4YLR164W PAU8P0CE92 120 aa7.93□□□□□ -1.14
SHH4YLR164W PAU11P0CE93 120 aa7.93□□□□□ -1.14
SHH4YLR164W ALK2P32789 676 aaPredicted RBP7.93□□□□□ -1.14
SHH4YLR164W CDS1P38221 457 aa7.93□□□□□ -1.14
SHH4YLR164W PAU13P38725 120 aa7.93□□□□□ -1.14
SHH4YLR164W DOG2P38773 246 aa7.93□□□□□ -1.14
SHH4YLR164W DOG1P38774 246 aa7.93□□□□□ -1.14
SHH4YLR164W GLE2P40066 365 aa7.93□□□□□ -1.14
SHH4YLR164W YER188WP40103 239 aa7.93□□□□□ -1.14
SHH4YLR164W SWT21P53873 357 aaPredicted RBP7.93□□□□□ -1.14
SHH4YLR164W PAU10Q03050 120 aa7.93□□□□□ -1.14
SHH4YLR164W YMR181CQ03231 154 aa7.93□□□□□ -1.14
SHH4YLR164W PAU20Q08322 120 aa7.93□□□□□ -1.14
SHH4YLR164W YPR145C-AQ2V2P0 78 aa7.93□□□□□ -1.14
SHH4YLR164W PAU9Q3E770 120 aa7.93□□□□□ -1.14
SHH4YLR164W TDH1P00360 332 aaKnown RBP7.92□□□□□ -1.14
SHH4YLR164W DFR1P07807 211 aaKnown RBP RIP-Chip data7.92□□□□□ -1.14not detected
SHH4YLR164W AVT5P38176 459 aa7.92□□□□□ -1.14
SHH4YLR164W LSM2P38203 95 aaKnown RBP7.92□□□□□ -1.14
SHH4YLR164W PET100P38958 111 aa7.92□□□□□ -1.14
SHH4YLR164W SNU13P39990 126 aaKnown RBP7.92□□□□□ -1.14
SHH4YLR164W YOR097CQ12274 175 aaPredicted RBP7.92□□□□□ -1.14
SHH4YLR164W PET494P07390 489 aaPredicted RBP7.91□□□□□ -1.14
SHH4YLR164W YHR213WP0CI67 198 aa7.91□□□□□ -1.14
SHH4YLR164W RPS2P25443 254 aaKnown RBP7.91□□□□□ -1.14
SHH4YLR164W FEN2P25621 512 aaKnown RBP7.91□□□□□ -1.14
SHH4YLR164W YJL027CP47063 138 aaPredicted RBP7.91□□□□□ -1.14
SHH4YLR164W BNS1P50084 137 aa7.91□□□□□ -1.14
SHH4YLR164W COQ3P27680 312 aa7.9□□□□□ -1.14
SHH4YLR164W NTF2P33331 125 aaKnown RBP7.9□□□□□ -1.14
SHH4YLR164W PRS4P38063 326 aaPredicted RBP7.9□□□□□ -1.14
SHH4YLR164W RRT1P38192 103 aa7.9□□□□□ -1.14
SHH4YLR164W HUA1P40325 198 aa7.9□□□□□ -1.14
SHH4YLR164W SAS2P40963 338 aa7.9□□□□□ -1.14
SHH4YLR164W YGR219WP53307 113 aa7.9□□□□□ -1.14
SHH4YLR164W HST4P53688 370 aa7.9□□□□□ -1.14
SHH4YLR164W DUG3P53871 357 aa7.9□□□□□ -1.14
SHH4YLR164W ATC1Q04005 294 aa7.9□□□□□ -1.14
SHH4YLR164W AYT1Q12226 474 aa7.9□□□□□ -1.14
SHH4YLR164W POP5P28005 173 aa7.89□□□□□ -1.15
SHH4YLR164W IMD2P38697 523 aaKnown RBP7.89□□□□□ -1.15
SHH4YLR164W PHS1P40857 217 aa7.89□□□□□ -1.15
SHH4YLR164W FIP1P45976 327 aa7.89□□□□□ -1.15
SHH4YLR164W SPG4Q04438 115 aa7.89□□□□□ -1.15
SHH4YLR164W LDS2Q08218 356 aa7.89□□□□□ -1.15
SHH4YLR164W SFT2P38166 215 aa7.88□□□□□ -1.15
SHH4YLR164W YIL163CP40448 117 aa7.88□□□□□ -1.15
SHH4YLR164W POG1P40473 351 aa7.88□□□□□ -1.15
SHH4YLR164W IMP2P46972 177 aa7.88□□□□□ -1.15
SHH4YLR164W VPS55P47111 140 aa7.88□□□□□ -1.15
SHH4YLR164W MSA1Q08471 629 aa7.88□□□□□ -1.15
SHH4YLR164W CPD1P53314 239 aa7.87□□□□□ -1.15
SHH4YLR164W OCA2P53949 197 aa7.87□□□□□ -1.15
SHH4YLR164W LOA1Q06508 300 aa7.87□□□□□ -1.15
SHH4YLR164W FIT2Q08906 153 aa7.87□□□□□ -1.15
SHH4YLR164W CYC3P06182 269 aa7.86□□□□□ -1.15
SHH4YLR164W RNA15P25299 296 aaPredicted RBP7.86□□□□□ -1.15
SHH4YLR164W PHD1P36093 366 aa7.86□□□□□ -1.15
SHH4YLR164W HIT1P46973 164 aa7.86□□□□□ -1.15
SHH4YLR164W TIM18Q08749 192 aa7.86□□□□□ -1.15
SHH4YLR164W LAC1P28496 418 aa7.85□□□□□ -1.15
SHH4YLR164W ATG8P38182 117 aaRIP-Chip data7.85□□□□□ -1.15not detected
SHH4YLR164W YBR090CP38253 122 aa7.85□□□□□ -1.15
SHH4YLR164W TOS8P53147 276 aa7.85□□□□□ -1.15
SHH4YLR164W YNR071CP53757 342 aa7.85□□□□□ -1.15
SHH4YLR164W HOR7Q05827 59 aa7.85□□□□□ -1.15
SHH4YLR164W YPR013CQ12145 317 aa7.85□□□□□ -1.15
SHH4YLR164W LAS17Q12446 633 aa7.85□□□□□ -1.15
SHH4YLR164W AFR1P33304 620 aa7.84□□□□□ -1.15
SHH4YLR164W MIC12P38341 106 aa7.84□□□□□ -1.15
SHH4YLR164W VMA21P41806 77 aa7.84□□□□□ -1.15
SHH4YLR164W YGR025WP53216 100 aa7.84□□□□□ -1.15
SHH4YLR164W TIM21P53220 239 aa7.84□□□□□ -1.15
SHH4YLR164W RAV2Q03956 351 aa7.84□□□□□ -1.15
SHH4YLR164W SDH7Q04401 133 aa7.84□□□□□ -1.15
SHH4YLR164W NNK1P36003 928 aa7.83□□□□□ -1.16
SHH4YLR164W DAN1P47178 298 aa7.83□□□□□ -1.16
SHH4YLR164W TOM7P53507 60 aa7.83□□□□□ -1.16
SHH4YLR164W YML108WQ03759 105 aa7.83□□□□□ -1.16
SHH4YLR164W STP4Q07351 490 aa7.83□□□□□ -1.16
SHH4YLR164W SEC59P20048 519 aa7.82□□□□□ -1.16
SHH4YLR164W HSP12P22943 109 aaKnown RBP7.82□□□□□ -1.16
SHH4YLR164W HMX1P32339 317 aa7.82□□□□□ -1.16
SHH4YLR164W YNK1P36010 153 aaKnown RBP7.82□□□□□ -1.16
SHH4YLR164W NSE4P43124 402 aa7.82□□□□□ -1.16
SHH4YLR164W CAB4P53332 305 aa7.82□□□□□ -1.16
SHH4YLR164W HHO1P53551 258 aa7.82□□□□□ -1.16
SHH4YLR164W ADH3P07246 375 aaKnown RBP7.81□□□□□ -1.16
SHH4YLR164W RPS22AP0C0W1 130 aaKnown RBP7.81□□□□□ -1.16
SHH4YLR164W TIR2P33890 251 aa7.81□□□□□ -1.16
SHH4YLR164W MRPS9P38120 278 aa7.81□□□□□ -1.16
SHH4YLR164W AIM24P47127 394 aa7.81□□□□□ -1.16
SHH4YLR164W YLR302CO13544 120 aa7.8□□□□□ -1.16
SHH4YLR164W MRPL4P36517 319 aa7.8□□□□□ -1.16
SHH4YLR164W YHR173CP38864 112 aa7.8□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 158.8 ms