RNA–Protein interactions for RNA: YLR119W

SRN2, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene SRN2, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRN2YLR119W RDI1Q12434 202 aa1.94□□□□□ -2.1
SRN2YLR119W TAR1Q8TGM6 124 aa1.94□□□□□ -2.1
SRN2YLR119W UBC6P33296 250 aaPredicted RBP1.93□□□□□ -2.1
SRN2YLR119W YRA2P36036 203 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
SRN2YLR119W YPR127WQ06494 345 aa1.93□□□□□ -2.1
SRN2YLR119W RPS28BP0C0X0 67 aaKnown RBP1.92□□□□□ -2.1
SRN2YLR119W ETR1P38071 380 aa1.92□□□□□ -2.1
SRN2YLR119W DER1P38307 211 aa1.92□□□□□ -2.1
SRN2YLR119W FYV4P38783 130 aaPredicted RBP1.92□□□□□ -2.1
SRN2YLR119W HHT1P61830 136 aa1.92□□□□□ -2.1
SRN2YLR119W PLP1Q04004 230 aa1.92□□□□□ -2.1
SRN2YLR119W THI74Q04083 370 aa1.92□□□□□ -2.1
SRN2YLR119W YLR053CQ12026 108 aa1.92□□□□□ -2.1
SRN2YLR119W YOR214CQ12282 236 aa1.92□□□□□ -2.1
SRN2YLR119W RPS28AQ3E7X9 67 aaPredicted RBP1.92□□□□□ -2.1
SRN2YLR119W SLM6P38343 150 aa1.91□□□□□ -2.1
SRN2YLR119W YNL200CP40165 246 aaKnown RBP1.91□□□□□ -2.1
SRN2YLR119W EFM5P53200 248 aaKnown RBP1.91□□□□□ -2.1
SRN2YLR119W TIM13P53299 105 aa1.91□□□□□ -2.1
SRN2YLR119W YKR005CQ02203 525 aa1.91□□□□□ -2.1
SRN2YLR119W FIG1P38224 298 aa1.9□□□□□ -2.11
SRN2YLR119W YPR202WQ08993 238 aa1.9□□□□□ -2.11
SRN2YLR119W YOR381W-AQ3E804 55 aa1.9□□□□□ -2.11
SRN2YLR119W CCS1P40202 249 aaKnown RBP1.89□□□□□ -2.11
SRN2YLR119W XPT1P47165 209 aa1.89□□□□□ -2.11
SRN2YLR119W YGL101WP53144 215 aa1.89□□□□□ -2.11
SRN2YLR119W NSL1Q12143 216 aa1.89□□□□□ -2.11
SRN2YLR119W ORM1P53224 222 aa1.88□□□□□ -2.11
SRN2YLR119W TMA20P89886 181 aaPredicted RBP1.88□□□□□ -2.11
SRN2YLR119W MAK3Q03503 176 aa1.88□□□□□ -2.11
SRN2YLR119W FIT1Q04433 528 aa1.88□□□□□ -2.11
SRN2YLR119W ELP6Q04868 273 aa1.88□□□□□ -2.11
SRN2YLR119W PET20Q99373 253 aa1.88□□□□□ -2.11
SRN2YLR119W UBI4P0CG63 381 aaKnown RBP1.87□□□□□ -2.11
SRN2YLR119W YHL037CP38733 133 aa1.86□□□□□ -2.11
SRN2YLR119W GLR1P41921 483 aaKnown RBP1.86□□□□□ -2.11
SRN2YLR119W NUF2P33895 451 aa1.85□□□□□ -2.11
SRN2YLR119W LSM3P57743 89 aaKnown RBP1.85□□□□□ -2.11
SRN2YLR119W YDR476CQ03362 224 aa1.85□□□□□ -2.11
SRN2YLR119W RIM9Q04734 239 aa1.85□□□□□ -2.11
SRN2YLR119W RAD6P06104 172 aa1.84□□□□□ -2.11
SRN2YLR119W BUB2P26448 306 aaPredicted RBP1.84□□□□□ -2.11
SRN2YLR119W YEL028WP39989 153 aa1.84□□□□□ -2.11
SRN2YLR119W YFL051CP43552 160 aa1.84□□□□□ -2.11
SRN2YLR119W YLR046CQ12253 270 aa1.84□□□□□ -2.11
SRN2YLR119W UBR1P19812 1950 aa1.83□□□□□ -2.12
SRN2YLR119W PEX34P25584 144 aa1.83□□□□□ -2.12
SRN2YLR119W PTC1P35182 281 aa1.83□□□□□ -2.12
SRN2YLR119W MOB1P40484 314 aa1.83□□□□□ -2.12
SRN2YLR119W YIL102CP40488 101 aa1.83□□□□□ -2.12
SRN2YLR119W DCV1P43595 202 aa1.83□□□□□ -2.12
SRN2YLR119W EFG1Q3E705 233 aaKnown RBP1.83□□□□□ -2.12
SRN2YLR119W RPL30P14120 105 aaKnown RBP1.82□□□□□ -2.12
SRN2YLR119W UGX2P32772 223 aa1.82□□□□□ -2.12
SRN2YLR119W NQM1P53228 333 aaPredicted RBP1.82□□□□□ -2.12
SRN2YLR119W YML079WQ03629 201 aa1.82□□□□□ -2.12
SRN2YLR119W SYM1Q06563 197 aa1.82□□□□□ -2.12
SRN2YLR119W TRM3Q07527 1436 aa1.82□□□□□ -2.12
SRN2YLR119W ATP5P09457 212 aa1.81□□□□□ -2.12
SRN2YLR119W YEL073CP39974 107 aa1.81□□□□□ -2.12
SRN2YLR119W APQ12P40532 138 aa1.81□□□□□ -2.12
SRN2YLR119W FIP1P45976 327 aa1.81□□□□□ -2.12
SRN2YLR119W PAC10P48363 199 aa1.81□□□□□ -2.12
SRN2YLR119W YAR064WP39563 99 aa1.8□□□□□ -2.12
SRN2YLR119W HRD1Q08109 551 aa1.8□□□□□ -2.12
SRN2YLR119W RIF1P29539 1916 aa1.79□□□□□ -2.12
SRN2YLR119W PET54P10834 293 aa1.79□□□□□ -2.12
SRN2YLR119W DLS1P40366 167 aa1.79□□□□□ -2.12
SRN2YLR119W CCC1P47818 322 aa1.79□□□□□ -2.12
SRN2YLR119W YDC1Q02896 317 aa1.79□□□□□ -2.12
SRN2YLR119W PRE1P22141 198 aaKnown RBP1.78□□□□□ -2.12
SRN2YLR119W YGL193CP53097 103 aa1.78□□□□□ -2.12
SRN2YLR119W YDL157CQ12082 118 aa1.78□□□□□ -2.12
SRN2YLR119W CCW12Q12127 133 aa1.78□□□□□ -2.12
SRN2YLR119W PBI2P0CT04 75 aaKnown RBP1.77□□□□□ -2.13
SRN2YLR119W HTD2P38790 280 aaKnown RBP1.77□□□□□ -2.13
SRN2YLR119W YJR015WP47090 510 aa1.77□□□□□ -2.13
SRN2YLR119W YGL230CP53074 147 aa1.77□□□□□ -2.13
SRN2YLR119W LIP1Q03579 150 aa1.77□□□□□ -2.13
SRN2YLR119W YOR1P53049 1477 aa1.76□□□□□ -2.13
SRN2YLR119W YKR070WP36151 352 aaKnown RBP1.76□□□□□ -2.13
SRN2YLR119W SRP102P36057 244 aaPredicted RBP1.75□□□□□ -2.13
SRN2YLR119W YGR269WP40326 108 aa1.75□□□□□ -2.13
SRN2YLR119W YJL218WP40892 196 aaKnown RBP1.75□□□□□ -2.13
SRN2YLR119W YDR102CQ03864 110 aa1.75□□□□□ -2.13
SRN2YLR119W YDL241WQ07738 123 aa1.75□□□□□ -2.13
SRN2YLR119W FMP49A0A023PZB3 126 aa1.74□□□□□ -2.13
SRN2YLR119W SPT14P32363 452 aa1.74□□□□□ -2.13
SRN2YLR119W SHB17P36136 271 aaKnown RBP1.74□□□□□ -2.13
SRN2YLR119W IPI1P38803 334 aaPredicted RBP1.74□□□□□ -2.13
SRN2YLR119W YER181CP40097 107 aa1.74□□□□□ -2.13
SRN2YLR119W MOG1P47123 218 aa1.74□□□□□ -2.13
SRN2YLR119W YNR064CP53750 290 aa1.74□□□□□ -2.13
SRN2YLR119W YPR114WQ06107 315 aa1.74□□□□□ -2.13
SRN2YLR119W LSM1P47017 172 aaKnown RBP1.73□□□□□ -2.13
SRN2YLR119W SPA2P23201 1466 aaKnown RBP1.73□□□□□ -2.13
SRN2YLR119W HFA1P32874 2273 aa1.72□□□□□ -2.13
SRN2YLR119W SPS2P08459 502 aa1.72□□□□□ -2.13
SRN2YLR119W PHO13P19881 312 aa1.72□□□□□ -2.13
SRN2YLR119W MRS4P23500 304 aa1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 147.3 ms