RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	SPS18	P32572	300 aa		3.03	□□□□□ -1.92
SOD1	YJR104C	YKR070W	P36151	352 aa	Known RBP	3.03	□□□□□ -1.92
SOD1	YJR104C	ARC40	P38328	384 aa	Known RBP	3.03	□□□□□ -1.92
SOD1	YJR104C	VBA2	P38358	474 aa	Known RBP	3.03	□□□□□ -1.92
SOD1	YJR104C	RPP1	P38786	293 aa		3.03	□□□□□ -1.92
SOD1	YJR104C	YND1	P40009	630 aa		3.03	□□□□□ -1.92
SOD1	YJR104C	YJL068C	P40363	299 aa		3.03	□□□□□ -1.92
SOD1	YJR104C	SFH5	P47008	294 aa		3.03	□□□□□ -1.92
SOD1	YJR104C	MIC27	P50945	234 aa		3.03	□□□□□ -1.92
SOD1	YJR104C	YNR064C	P53750	290 aa		3.03	□□□□□ -1.92
SOD1	YJR104C	YMR082C	Q04276	118 aa		3.03	□□□□□ -1.92
SOD1	YJR104C	GRH1	Q04410	372 aa	Known RBP	3.03	□□□□□ -1.92
SOD1	YJR104C	RIM9	Q04734	239 aa		3.03	□□□□□ -1.92
SOD1	YJR104C	YDL242W	Q07746	117 aa		3.03	□□□□□ -1.92
SOD1	YJR104C	LDS2	Q08218	356 aa		3.03	□□□□□ -1.92
SOD1	YJR104C	GRE1	Q08969	168 aa		3.03	□□□□□ -1.92
SOD1	YJR104C	RPS22B	Q3E7Y3	130 aa	Known RBP	3.03	□□□□□ -1.92
SOD1	YJR104C	STT4	P37297	1900 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	HEM4	P06174	275 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	STE7	P06784	515 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	CDC21	P06785	304 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	YAR066W	P0CX18	203 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	YHR214W	P0CX19	203 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	COX10	P21592	462 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	TOA2	P32774	122 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	KKQ8	P36004	724 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	GPX1	P36014	167 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	SRP14	P38985	146 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	YEL068C	P39977	110 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	ATF1	P40353	525 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	BXI1	P48558	297 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	YGL235W	P53071	178 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	YIP3	P53633	176 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	TGL2	P54857	326 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	BUD25	P85052	153 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	RPL21A	Q02753	160 aa	Known RBP	3.02	□□□□□ -1.93
SOD1	YJR104C	SPG3	Q04398	127 aa	Predicted RBP	3.02	□□□□□ -1.93
SOD1	YJR104C	ATO3	Q12359	275 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	POM34	Q12445	299 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	PEX11	Q12462	236 aa		3.02	□□□□□ -1.93
SOD1	YJR104C	RPL21B	Q12672	160 aa	Known RBP	3.02	□□□□□ -1.93
SOD1	YJR104C	YDR157W	A0A023PZE8	133 aa		3.01	□□□□□ -1.93
SOD1	YJR104C	CYC3	P06182	269 aa		3.01	□□□□□ -1.93
SOD1	YJR104C	MRS1	P07266	363 aa		3.01	□□□□□ -1.93
SOD1	YJR104C	RPS28B	P0C0X0	67 aa	Known RBP	3.01	□□□□□ -1.93
SOD1	YJR104C	MCK1	P21965	375 aa	Known RBP	3.01	□□□□□ -1.93
SOD1	YJR104C	IDH2	P28241	369 aa	Known RBP	3.01	□□□□□ -1.93
SOD1	YJR104C	TIR2	P33890	251 aa		3.01	□□□□□ -1.93
SOD1	YJR104C	YKL071W	P36086	256 aa		3.01	□□□□□ -1.93
SOD1	YJR104C	YAL037W	P39728	267 aa		3.01	□□□□□ -1.93
SOD1	YJR104C	YIL169C	P40442	995 aa		3.01	□□□□□ -1.93
SOD1	YJR104C	XBP1	P40489	647 aa		3.01	□□□□□ -1.93
SOD1	YJR104C	YJL213W	P40896	331 aa		3.01	□□□□□ -1.93
SOD1	YJR104C	AZF1	P41696	914 aa		3.01	□□□□□ -1.93
SOD1	YJR104C	YDL186W	P48568	277 aa		3.01	□□□□□ -1.93
SOD1	YJR104C	SCW4	P53334	386 aa	Known RBP	3.01	□□□□□ -1.93
SOD1	YJR104C	RSF1	Q05043	376 aa		3.01	□□□□□ -1.93
SOD1	YJR104C	YOR105W	Q08504	108 aa		3.01	□□□□□ -1.93
SOD1	YJR104C	YPL264C	Q08980	353 aa		3.01	□□□□□ -1.93
SOD1	YJR104C	YPR011C	Q12251	326 aa		3.01	□□□□□ -1.93
SOD1	YJR104C	RPS28A	Q3E7X9	67 aa	Predicted RBP	3.01	□□□□□ -1.93
SOD1	YJR104C	ATG40	Q99325	256 aa		3.01	□□□□□ -1.93
SOD1	YJR104C	RPS22A	P0C0W1	130 aa	Known RBP	3	□□□□□ -1.93
SOD1	YJR104C	RPL12A	P0CX53	165 aa	Known RBP	3	□□□□□ -1.93
SOD1	YJR104C	RPL12B	P0CX54	165 aa		3	□□□□□ -1.93
SOD1	YJR104C	MDH2	P22133	377 aa		3	□□□□□ -1.93
SOD1	YJR104C	SPO13	P23624	291 aa		3	□□□□□ -1.93
SOD1	YJR104C	ERG8	P24521	451 aa		3	□□□□□ -1.93
SOD1	YJR104C	AHT1	P29589	182 aa		3	□□□□□ -1.93
SOD1	YJR104C	ARO4	P32449	370 aa	Known RBP	3	□□□□□ -1.93
SOD1	YJR104C	ECM15	P35195	104 aa		3	□□□□□ -1.93
SOD1	YJR104C	SWD2	P36104	329 aa	Predicted RBP	3	□□□□□ -1.93
SOD1	YJR104C	YBR090C	P38253	122 aa		3	□□□□□ -1.93
SOD1	YJR104C	YHR097C	P38809	366 aa	Known RBP	3	□□□□□ -1.93
SOD1	YJR104C	YER076C	P40049	302 aa		3	□□□□□ -1.93
SOD1	YJR104C	YFR020W	P43600	232 aa		3	□□□□□ -1.93
SOD1	YJR104C	GPI2	P46961	280 aa		3	□□□□□ -1.93
SOD1	YJR104C	OST2	P46964	130 aa		3	□□□□□ -1.93
SOD1	YJR104C	YGL118C	P53132	145 aa		3	□□□□□ -1.93
SOD1	YJR104C	ALG9	P53868	555 aa	Known RBP	3	□□□□□ -1.93
SOD1	YJR104C	YMR090W	Q04304	227 aa	Known RBP	3	□□□□□ -1.93
SOD1	YJR104C	YMR310C	Q04867	317 aa	Predicted RBP	3	□□□□□ -1.93
SOD1	YJR104C	YLR296W	Q05898	108 aa		3	□□□□□ -1.93
SOD1	YJR104C	NAT3	Q06504	195 aa		3	□□□□□ -1.93
SOD1	YJR104C	PAM18	Q07914	168 aa		3	□□□□□ -1.93
SOD1	YJR104C	DGA1	Q08650	418 aa		3	□□□□□ -1.93
SOD1	YJR104C	SMT3	Q12306	101 aa	Known RBP	3	□□□□□ -1.93
SOD1	YJR104C	YKL023C-A	Q2V2P3	75 aa		3	□□□□□ -1.93
SOD1	YJR104C	YCR024C-B	Q3E7Z8	88 aa		3	□□□□□ -1.93
SOD1	YJR104C	KRE1	P17260	313 aa		2.99	□□□□□ -1.93
SOD1	YJR104C	CDC43	P18898	376 aa		2.99	□□□□□ -1.93
SOD1	YJR104C	ERG4	P25340	473 aa		2.99	□□□□□ -1.93
SOD1	YJR104C	YCR100C	P25606	316 aa		2.99	□□□□□ -1.93
SOD1	YJR104C	SRP21	P32342	167 aa		2.99	□□□□□ -1.93
SOD1	YJR104C	AGA2	P32781	87 aa		2.99	□□□□□ -1.93
SOD1	YJR104C	MIC12	P38341	106 aa		2.99	□□□□□ -1.93
SOD1	YJR104C	ECM14	P38836	430 aa		2.99	□□□□□ -1.93
SOD1	YJR104C	ARP3	P47117	449 aa	Known RBP	2.99	□□□□□ -1.93
SOD1	YJR104C	MRPL19	P53875	158 aa		2.99	□□□□□ -1.93
SOD1	YJR104C	YNL143C	P53908	130 aa		2.99	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms