RNA–Protein interactions for RNA: YJL054W

TIM54, Transcript of Component of the mitochondrial TIM22 complex, yeastyeast

Gene TIM54, Length 1,437 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM54YJL054W YIF1P53845 314 aaKnown RBP4.08□□□□□ -1.76
TIM54YJL054W ATG39Q06159 398 aa4.08□□□□□ -1.76
TIM54YJL054W FRQ1Q06389 190 aa4.08□□□□□ -1.76
TIM54YJL054W YPR013CQ12145 317 aa4.08□□□□□ -1.76
TIM54YJL054W PAA1Q12447 191 aaKnown RBP4.08□□□□□ -1.76
TIM54YJL054W LAC1P28496 418 aa4.07□□□□□ -1.76
TIM54YJL054W YIR035CP40579 254 aa4.07□□□□□ -1.76
TIM54YJL054W HXT14P42833 540 aa4.07□□□□□ -1.76
TIM54YJL054W HAM1P47119 197 aaKnown RBP4.07□□□□□ -1.76
TIM54YJL054W FYV6P53913 173 aa4.07□□□□□ -1.76
TIM54YJL054W MRPS16Q02608 121 aa4.07□□□□□ -1.76
TIM54YJL054W YPL264CQ08980 353 aa4.07□□□□□ -1.76
TIM54YJL054W AIM45Q12480 344 aaKnown RBP4.07□□□□□ -1.76
TIM54YJL054W SEC22P22214 214 aa4.06□□□□□ -1.76
TIM54YJL054W YCR022CP25620 114 aa4.06□□□□□ -1.76
TIM54YJL054W BDH1P39714 382 aa4.06□□□□□ -1.76
TIM54YJL054W SIM1P40472 476 aa4.06□□□□□ -1.76
TIM54YJL054W RTS2P40962 232 aa4.06□□□□□ -1.76
TIM54YJL054W TDA4P47153 279 aa4.06□□□□□ -1.76
TIM54YJL054W YGR018CP53211 109 aa4.06□□□□□ -1.76
TIM54YJL054W PDR17P53844 350 aa4.06□□□□□ -1.76
TIM54YJL054W OCA2P53949 197 aa4.06□□□□□ -1.76
TIM54YJL054W GPI15P53961 229 aa4.06□□□□□ -1.76
TIM54YJL054W YMR090WQ04304 227 aaKnown RBP4.06□□□□□ -1.76
TIM54YJL054W FCY2P17064 533 aa4.05□□□□□ -1.76
TIM54YJL054W POP5P28005 173 aa4.05□□□□□ -1.76
TIM54YJL054W SRL3P36167 246 aa4.05□□□□□ -1.76
TIM54YJL054W NRG2P38082 220 aa4.05□□□□□ -1.76
TIM54YJL054W SNF11P38956 169 aa4.05□□□□□ -1.76
TIM54YJL054W SNU13P39990 126 aaKnown RBP4.05□□□□□ -1.76
TIM54YJL054W POS5Q06892 414 aa4.05□□□□□ -1.76
TIM54YJL054W LDS2Q08218 356 aa4.05□□□□□ -1.76
TIM54YJL054W POC4Q12245 148 aaPredicted RBP4.05□□□□□ -1.76
TIM54YJL054W COA2Q3E823 68 aa4.05□□□□□ -1.76
TIM54YJL054W ISN1Q99312 450 aa4.05□□□□□ -1.76
TIM54YJL054W PIS1P06197 220 aaKnown RBP4.04□□□□□ -1.76
TIM54YJL054W SLM6P38343 150 aa4.04□□□□□ -1.76
TIM54YJL054W MST28P39552 234 aa4.04□□□□□ -1.76
TIM54YJL054W YJL027CP47063 138 aaPredicted RBP4.04□□□□□ -1.76
TIM54YJL054W MIC26P50087 233 aa4.04□□□□□ -1.76
TIM54YJL054W MST27P53176 234 aa4.04□□□□□ -1.76
TIM54YJL054W ORM1P53224 222 aa4.04□□□□□ -1.76
TIM54YJL054W LST7P53237 242 aa4.04□□□□□ -1.76
TIM54YJL054W COX12Q01519 83 aa4.04□□□□□ -1.76
TIM54YJL054W SDH7Q04401 133 aa4.04□□□□□ -1.76
TIM54YJL054W AGC1Q12482 902 aa4.04□□□□□ -1.76
TIM54YJL054W RPS25BP0C0T4 108 aaKnown RBP4.04□□□□□ -1.76
TIM54YJL054W YHR213WP0CI67 198 aa4.04□□□□□ -1.76
TIM54YJL054W RRF1P38771 230 aa4.04□□□□□ -1.76
TIM54YJL054W GLO1P50107 326 aa4.04□□□□□ -1.76
TIM54YJL054W RRT7Q07829 113 aa4.04□□□□□ -1.76
TIM54YJL054W RPS25AQ3E792 108 aaPredicted RBP4.04□□□□□ -1.76
TIM54YJL054W YEA6P39953 335 aa4.03□□□□□ -1.76
TIM54YJL054W GLE2P40066 365 aa4.03□□□□□ -1.76
TIM54YJL054W YFR035CP43608 114 aa4.03□□□□□ -1.76
TIM54YJL054W GPI2P46961 280 aa4.03□□□□□ -1.76
TIM54YJL054W YJR015WP47090 510 aa4.03□□□□□ -1.76
TIM54YJL054W ERP1Q05359 219 aaKnown RBP4.03□□□□□ -1.76
TIM54YJL054W RDS3Q06835 107 aaPredicted RBP4.03□□□□□ -1.76
TIM54YJL054W CRC1Q12289 327 aa4.03□□□□□ -1.76
TIM54YJL054W YLR146W-AQ2V2P1 62 aa4.03□□□□□ -1.76
TIM54YJL054W YHR213W-AQ8TGT4 77 aa4.03□□□□□ -1.76
TIM54YJL054W CDC7P06243 507 aa4.02□□□□□ -1.77
TIM54YJL054W TIP1P27654 210 aaPredicted RBP4.02□□□□□ -1.77
TIM54YJL054W COQ3P27680 312 aa4.02□□□□□ -1.77
TIM54YJL054W YIL024CP40543 189 aa4.02□□□□□ -1.77
TIM54YJL054W IMP2P46972 177 aa4.02□□□□□ -1.77
TIM54YJL054W PKP2P53170 491 aa4.02□□□□□ -1.77
TIM54YJL054W ZRC1P20107 442 aa4.01□□□□□ -1.77
TIM54YJL054W YCR025CP25352 136 aa4.01□□□□□ -1.77
TIM54YJL054W CMC1P36064 111 aa4.01□□□□□ -1.77
TIM54YJL054W SWM2P40342 146 aa4.01□□□□□ -1.77
TIM54YJL054W MIC27P50945 234 aa4.01□□□□□ -1.77
TIM54YJL054W PNC1P53184 216 aaKnown RBP4.01□□□□□ -1.77
TIM54YJL054W HST4P53688 370 aa4.01□□□□□ -1.77
TIM54YJL054W BOR1P53838 576 aa4.01□□□□□ -1.77
TIM54YJL054W UBC7Q02159 165 aa4.01□□□□□ -1.77
TIM54YJL054W YMR082CQ04276 118 aa4.01□□□□□ -1.77
TIM54YJL054W YNL146C-AQ3E7Z1 64 aa4.01□□□□□ -1.77
TIM54YJL054W YOR011W-AQ3E807 68 aa4.01□□□□□ -1.77
TIM54YJL054W YDR157WA0A023PZE8 133 aa4□□□□□ -1.77
TIM54YJL054W YMR316C-AI2HB70 103 aa4□□□□□ -1.77
TIM54YJL054W PPQ1P32945 549 aa4□□□□□ -1.77
TIM54YJL054W UPS2P35200 230 aa4□□□□□ -1.77
TIM54YJL054W YGR269WP40326 108 aa4□□□□□ -1.77
TIM54YJL054W YIP3P53633 176 aa4□□□□□ -1.77
TIM54YJL054W DID2P69771 204 aa4□□□□□ -1.77
TIM54YJL054W ODC1Q03028 310 aa4□□□□□ -1.77
TIM54YJL054W YPL162CQ12042 273 aa4□□□□□ -1.77
TIM54YJL054W PRR2Q12310 699 aa4□□□□□ -1.77
TIM54YJL054W DFR1P07807 211 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
TIM54YJL054W SHB17P36136 271 aaKnown RBP3.99□□□□□ -1.77
TIM54YJL054W SFT2P38166 215 aa3.99□□□□□ -1.77
TIM54YJL054W SAS2P40963 338 aa3.99□□□□□ -1.77
TIM54YJL054W LCB3P47013 409 aa3.99□□□□□ -1.77
TIM54YJL054W SHH3Q04487 196 aa3.99□□□□□ -1.77
TIM54YJL054W YLR179CQ06252 201 aaKnown RBP3.99□□□□□ -1.77
TIM54YJL054W BER1Q06688 274 aaKnown RBP3.99□□□□□ -1.77
TIM54YJL054W AYT1Q12226 474 aa3.99□□□□□ -1.77
TIM54YJL054W PRM7Q12459 698 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms