RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C NSE4P43124 402 aa2.89□□□□□ -1.95
YIR043CYIR043C YGL193CP53097 103 aa2.89□□□□□ -1.95
YIR043CYIR043C RRP17Q04031 235 aaPredicted RBP2.89□□□□□ -1.95
YIR043CYIR043C HTD2P38790 280 aaKnown RBP2.88□□□□□ -1.95
YIR043CYIR043C FIP1P45976 327 aa2.88□□□□□ -1.95
YIR043CYIR043C ALB1P47019 175 aaPredicted RBP2.88□□□□□ -1.95
YIR043CYIR043C MOG1P47123 218 aa2.88□□□□□ -1.95
YIR043CYIR043C YDC1Q02896 317 aa2.88□□□□□ -1.95
YIR043CYIR043C HRD1Q08109 551 aa2.88□□□□□ -1.95
YIR043CYIR043C UPS2P35200 230 aa2.87□□□□□ -1.95
YIR043CYIR043C LSM1P47017 172 aaKnown RBP2.87□□□□□ -1.95
YIR043CYIR043C CCC1P47818 322 aa2.87□□□□□ -1.95
YIR043CYIR043C LIP1Q03579 150 aa2.87□□□□□ -1.95
YIR043CYIR043C YDR391CQ04170 232 aa2.87□□□□□ -1.95
YIR043CYIR043C YOR1P53049 1477 aa2.86□□□□□ -1.95
YIR043CYIR043C STF2P16965 84 aa2.86□□□□□ -1.95
YIR043CYIR043C UBC8P28263 218 aa2.86□□□□□ -1.95
YIR043CYIR043C YAP3P38749 330 aa2.86□□□□□ -1.95
YIR043CYIR043C PKR1Q03880 122 aaKnown RBP2.86□□□□□ -1.95
YIR043CYIR043C RAV2Q03956 351 aa2.86□□□□□ -1.95
YIR043CYIR043C YHP1Q04116 353 aa2.86□□□□□ -1.95
YIR043CYIR043C YRA2P36036 203 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
YIR043CYIR043C FLX1P40464 311 aa2.85□□□□□ -1.95
YIR043CYIR043C HYR1P40581 163 aaKnown RBP2.85□□□□□ -1.95
YIR043CYIR043C RCE1Q03530 315 aa2.85□□□□□ -1.95
YIR043CYIR043C YNL146C-AQ3E7Z1 64 aa2.85□□□□□ -1.95
YIR043CYIR043C RPB7P34087 171 aa2.84□□□□□ -1.95
YIR043CYIR043C IPI1P38803 334 aaPredicted RBP2.84□□□□□ -1.95
YIR043CYIR043C HPA3P39979 161 aa2.84□□□□□ -1.95
YIR043CYIR043C YJR015WP47090 510 aa2.84□□□□□ -1.95
YIR043CYIR043C PAC10P48363 199 aa2.84□□□□□ -1.95
YIR043CYIR043C FPR1P20081 114 aaKnown RBP2.83□□□□□ -1.96
YIR043CYIR043C SOK1P40317 901 aa2.83□□□□□ -1.96
YIR043CYIR043C MPM1P40364 252 aa2.83□□□□□ -1.96
YIR043CYIR043C MOB1P40484 314 aa2.83□□□□□ -1.96
YIR043CYIR043C YNR064CP53750 290 aa2.83□□□□□ -1.96
YIR043CYIR043C YDR102CQ03864 110 aa2.83□□□□□ -1.96
YIR043CYIR043C UIP4Q08926 304 aa2.83□□□□□ -1.96
YIR043CYIR043C UBR2Q07963 1872 aa2.82□□□□□ -1.96
YIR043CYIR043C YEL067CP39978 195 aa2.82□□□□□ -1.96
YIR043CYIR043C YER181CP40097 107 aa2.81□□□□□ -1.96
YIR043CYIR043C CCS1P40202 249 aaKnown RBP2.81□□□□□ -1.96
YIR043CYIR043C YAE1P47118 141 aaPredicted RBP2.81□□□□□ -1.96
YIR043CYIR043C ELP6Q04868 273 aa2.81□□□□□ -1.96
YIR043CYIR043C YPD1Q07688 167 aa2.81□□□□□ -1.96
YIR043CYIR043C YMR030W-AQ3E760 96 aa2.81□□□□□ -1.96
YIR043CYIR043C MAK31P23059 88 aa2.8□□□□□ -1.96
YIR043CYIR043C CWC27Q02770 301 aa2.8□□□□□ -1.96
YIR043CYIR043C YML079WQ03629 201 aa2.8□□□□□ -1.96
YIR043CYIR043C YPR114WQ06107 315 aa2.8□□□□□ -1.96
YIR043CYIR043C ATG10Q07879 167 aa2.8□□□□□ -1.96
YIR043CYIR043C SEN2P16658 377 aa2.79□□□□□ -1.96
YIR043CYIR043C YJL218WP40892 196 aaKnown RBP2.79□□□□□ -1.96
YIR043CYIR043C YPT31P38555 223 aaKnown RBP2.78□□□□□ -1.96
YIR043CYIR043C BEM2P39960 2167 aaKnown RBP2.78□□□□□ -1.96
YIR043CYIR043C SPA2P23201 1466 aaKnown RBP2.77□□□□□ -1.97
YIR043CYIR043C PHO13P19881 312 aa2.77□□□□□ -1.97
YIR043CYIR043C YBL010CP32788 280 aa2.77□□□□□ -1.97
YIR043CYIR043C MRPL24P36525 258 aaPredicted RBP2.77□□□□□ -1.97
YIR043CYIR043C YMR252CQ04814 134 aa2.77□□□□□ -1.97
YIR043CYIR043C YDL157CQ12082 118 aa2.77□□□□□ -1.97
YIR043CYIR043C SPS2P08459 502 aa2.76□□□□□ -1.97
YIR043CYIR043C SPT14P32363 452 aa2.76□□□□□ -1.97
YIR043CYIR043C ACP1P32463 125 aa2.76□□□□□ -1.97
YIR043CYIR043C YHL042WP38729 150 aa2.76□□□□□ -1.97
YIR043CYIR043C YEL008WP40001 126 aa2.76□□□□□ -1.97
YIR043CYIR043C YGR269WP40326 108 aa2.76□□□□□ -1.97
YIR043CYIR043C UBC7Q02159 165 aa2.75□□□□□ -1.97
YIR043CYIR043C YDL241WQ07738 123 aa2.75□□□□□ -1.97
YIR043CYIR043C MRS4P23500 304 aa2.74□□□□□ -1.97
YIR043CYIR043C MZM1Q03429 123 aaPredicted RBP2.74□□□□□ -1.97
YIR043CYIR043C INO4P13902 151 aa2.73□□□□□ -1.97
YIR043CYIR043C YCL042WP25572 119 aa2.73□□□□□ -1.97
YIR043CYIR043C MET31Q03081 177 aa2.73□□□□□ -1.97
YIR043CYIR043C YMR320WQ04897 101 aa2.73□□□□□ -1.97
YIR043CYIR043C ETR1P38071 380 aa2.72□□□□□ -1.97
YIR043CYIR043C YGR201CP42936 225 aa2.72□□□□□ -1.97
YIR043CYIR043C RBL2P48606 106 aaKnown RBP2.72□□□□□ -1.97
YIR043CYIR043C ADE6P38972 1358 aaKnown RBP2.72□□□□□ -1.97
YIR043CYIR043C CIN5P40917 295 aa2.71□□□□□ -1.98
YIR043CYIR043C RRT7Q07829 113 aa2.71□□□□□ -1.98
YIR043CYIR043C YFL065CP43539 102 aa2.7□□□□□ -1.98
YIR043CYIR043C GEP7P53171 287 aa2.7□□□□□ -1.98
YIR043CYIR043C EST3Q03096 181 aa2.7□□□□□ -1.98
YIR043CYIR043C TAR1Q8TGM6 124 aa2.7□□□□□ -1.98
YIR043CYIR043C UBR1P19812 1950 aa2.69□□□□□ -1.98
YIR043CYIR043C GPI2P46961 280 aa2.69□□□□□ -1.98
YIR043CYIR043C YDR366CP87287 132 aa2.69□□□□□ -1.98
YIR043CYIR043C AVO2Q04749 426 aa2.69□□□□□ -1.98
YIR043CYIR043C RFU1Q08003 200 aa2.69□□□□□ -1.98
YIR043CYIR043C RPS25BP0C0T4 108 aaKnown RBP2.68□□□□□ -1.98
YIR043CYIR043C DDR48P18899 430 aaKnown RBP2.68□□□□□ -1.98
YIR043CYIR043C RPS25AQ3E792 108 aaPredicted RBP2.68□□□□□ -1.98
YIR043CYIR043C COA3Q3E7B2 85 aa2.68□□□□□ -1.98
YIR043CYIR043C ACC1Q00955 2233 aaKnown RBP2.67□□□□□ -1.98
YIR043CYIR043C CYC2P38909 366 aa2.67□□□□□ -1.98
YIR043CYIR043C COF1Q03048 143 aaKnown RBP2.67□□□□□ -1.98
YIR043CYIR043C FMN1Q03778 218 aa2.67□□□□□ -1.98
YIR043CYIR043C RIB3Q99258 208 aa2.67□□□□□ -1.98
YIR043CYIR043C HSP12P22943 109 aaKnown RBP2.66□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms