RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD1YHR003C PSF1Q12488 208 aa2.19□□□□□ -2.06
TCD1YHR003C ISD11Q6Q560 94 aa2.19□□□□□ -2.06
TCD1YHR003C HFA1P32874 2273 aa2.18□□□□□ -2.06
TCD1YHR003C YEL009C-AA0A023PZF2 135 aa2.18□□□□□ -2.06
TCD1YHR003C REP2P03872 296 aa2.18□□□□□ -2.06
TCD1YHR003C ADH3P07246 375 aaKnown RBP2.18□□□□□ -2.06
TCD1YHR003C YLR156WP0CE96 114 aa2.18□□□□□ -2.06
TCD1YHR003C YLR159WP0CE97 114 aa2.18□□□□□ -2.06
TCD1YHR003C YLR161WP0CE98 114 aa2.18□□□□□ -2.06
TCD1YHR003C HSP26P15992 214 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
TCD1YHR003C CCA1P21269 546 aa2.18□□□□□ -2.06
TCD1YHR003C BET1P22804 142 aa2.18□□□□□ -2.06
TCD1YHR003C TOM40P23644 387 aaKnown RBP2.18□□□□□ -2.06
TCD1YHR003C HSP30P25619 332 aa2.18□□□□□ -2.06
TCD1YHR003C RCN1P36054 211 aa2.18□□□□□ -2.06
TCD1YHR003C PAN3P36102 679 aaPredicted RBP2.18□□□□□ -2.06
TCD1YHR003C MRPL24P36525 258 aaPredicted RBP2.18□□□□□ -2.06
TCD1YHR003C RPS20P38701 121 aaKnown RBP2.18□□□□□ -2.06
TCD1YHR003C NSG1P38837 291 aa2.18□□□□□ -2.06
TCD1YHR003C AIM2P39721 246 aa2.18□□□□□ -2.06
TCD1YHR003C YNL200CP40165 246 aaKnown RBP2.18□□□□□ -2.06
TCD1YHR003C FIS1P40515 155 aa2.18□□□□□ -2.06
TCD1YHR003C SER2P42941 309 aa2.18□□□□□ -2.06
TCD1YHR003C YFR054CP43622 192 aa2.18□□□□□ -2.06
TCD1YHR003C OST2P46964 130 aa2.18□□□□□ -2.06
TCD1YHR003C TIM13P53299 105 aa2.18□□□□□ -2.06
TCD1YHR003C CAB4P53332 305 aa2.18□□□□□ -2.06
TCD1YHR003C SLM2P53955 656 aa2.18□□□□□ -2.06
TCD1YHR003C FMN1Q03778 218 aa2.18□□□□□ -2.06
TCD1YHR003C RUB1Q03919 77 aa2.18□□□□□ -2.06
TCD1YHR003C PRP11Q07350 266 aaPredicted RBP2.18□□□□□ -2.06
TCD1YHR003C YOL029CQ08187 201 aa2.18□□□□□ -2.06
TCD1YHR003C YPL225WQ08971 146 aaKnown RBP2.18□□□□□ -2.06
TCD1YHR003C GEP5Q12393 293 aa2.18□□□□□ -2.06
TCD1YHR003C YOL085CQ99345 113 aa2.18□□□□□ -2.06
TCD1YHR003C MOT1P32333 1867 aa2.18□□□□□ -2.06
TCD1YHR003C MYO1P08964 1928 aa2.17□□□□□ -2.06
TCD1YHR003C CBP6P07253 162 aaPredicted RBP2.17□□□□□ -2.06
TCD1YHR003C SGA1P08019 549 aa2.17□□□□□ -2.06
TCD1YHR003C YPR170W-BP0C5R9 85 aa2.17□□□□□ -2.06
TCD1YHR003C PHO85P17157 305 aa2.17□□□□□ -2.06
TCD1YHR003C PRE7P23724 241 aaKnown RBP2.17□□□□□ -2.06
TCD1YHR003C RSA4P25382 515 aaKnown RBP2.17□□□□□ -2.06
TCD1YHR003C TFC1P32367 649 aa2.17□□□□□ -2.06
TCD1YHR003C UTP11P34247 250 aaPredicted RBP2.17□□□□□ -2.06
TCD1YHR003C GPI18P38211 433 aa2.17□□□□□ -2.06
TCD1YHR003C OPY1P38271 328 aa2.17□□□□□ -2.06
TCD1YHR003C RRT13P40042 185 aa2.17□□□□□ -2.06
TCD1YHR003C PGD1P40356 397 aa2.17□□□□□ -2.06
TCD1YHR003C FIP1P45976 327 aa2.17□□□□□ -2.06
TCD1YHR003C RSM27P53305 110 aa2.17□□□□□ -2.06
TCD1YHR003C APJ1P53940 528 aa2.17□□□□□ -2.06
TCD1YHR003C APS2Q00381 147 aa2.17□□□□□ -2.06
TCD1YHR003C YAL067W-AQ8TGK6 75 aa2.17□□□□□ -2.06
TCD1YHR003C RPL9AP05738 191 aaKnown RBP2.16□□□□□ -2.06
TCD1YHR003C RPL43AP0CX25 92 aaKnown RBP2.16□□□□□ -2.06
TCD1YHR003C RPL43BP0CX26 92 aa2.16□□□□□ -2.06
TCD1YHR003C NMT1P14743 455 aa2.16□□□□□ -2.06
TCD1YHR003C ATP15P21306 62 aa2.16□□□□□ -2.06
TCD1YHR003C COX10P21592 462 aa2.16□□□□□ -2.06
TCD1YHR003C PTC1P35182 281 aa2.16□□□□□ -2.06
TCD1YHR003C MID2P36027 376 aa2.16□□□□□ -2.06
TCD1YHR003C SHB17P36136 271 aaKnown RBP2.16□□□□□ -2.06
TCD1YHR003C YAR068WP39564 161 aa2.16□□□□□ -2.06
TCD1YHR003C AVT2P39981 480 aa2.16□□□□□ -2.06
TCD1YHR003C RGI1P40043 161 aaPredicted RBP2.16□□□□□ -2.06
TCD1YHR003C YER181CP40097 107 aa2.16□□□□□ -2.06
TCD1YHR003C ERJ5P43613 295 aaPredicted RBP2.16□□□□□ -2.06
TCD1YHR003C PGU1P47180 361 aa2.16□□□□□ -2.06
TCD1YHR003C RPL9BP51401 191 aaKnown RBP2.16□□□□□ -2.06
TCD1YHR003C CAX4P53223 239 aa2.16□□□□□ -2.06
TCD1YHR003C HHO1P53551 258 aa2.16□□□□□ -2.06
TCD1YHR003C RSM10Q03201 203 aa2.16□□□□□ -2.06
TCD1YHR003C CGI121Q03705 181 aaKnown RBP2.16□□□□□ -2.06
TCD1YHR003C ATG39Q06159 398 aa2.16□□□□□ -2.06
TCD1YHR003C NAT3Q06504 195 aa2.16□□□□□ -2.06
TCD1YHR003C FYV7Q12247 151 aa2.16□□□□□ -2.06
TCD1YHR003C ATP5P09457 212 aa2.15□□□□□ -2.07
TCD1YHR003C HYM1P32464 399 aa2.15□□□□□ -2.07
TCD1YHR003C MRPL27P36526 146 aaPredicted RBP2.15□□□□□ -2.07
TCD1YHR003C YER134CP40081 178 aa2.15□□□□□ -2.07
TCD1YHR003C MOB1P40484 314 aa2.15□□□□□ -2.07
TCD1YHR003C YFL019CP43576 117 aa2.15□□□□□ -2.07
TCD1YHR003C VPS71Q03433 280 aa2.15□□□□□ -2.07
TCD1YHR003C SPG3Q04398 127 aaPredicted RBP2.15□□□□□ -2.07
TCD1YHR003C FCF1Q05498 189 aaPredicted RBP2.15□□□□□ -2.07
TCD1YHR003C LDB18Q07887 179 aa2.15□□□□□ -2.07
TCD1YHR003C YOL014WQ08110 124 aa2.15□□□□□ -2.07
TCD1YHR003C YDL012CQ12489 107 aa2.15□□□□□ -2.07
TCD1YHR003C YLR099W-AQ3E798 87 aa2.15□□□□□ -2.07
TCD1YHR003C YML100W-AQ8TGT0 57 aa2.15□□□□□ -2.07
TCD1YHR003C FMP49A0A023PZB3 126 aa2.14□□□□□ -2.07
TCD1YHR003C TIM9O74700 87 aa2.14□□□□□ -2.07
TCD1YHR003C COX4P04037 155 aa2.14□□□□□ -2.07
TCD1YHR003C LHP1P33399 275 aaKnown RBP2.14□□□□□ -2.07
TCD1YHR003C YRA2P36036 203 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
TCD1YHR003C ECM34P38728 170 aa2.14□□□□□ -2.07
TCD1YHR003C AYR1P40471 297 aa2.14□□□□□ -2.07
TCD1YHR003C GLR1P41921 483 aaKnown RBP2.14□□□□□ -2.07
TCD1YHR003C YGR017WP53210 297 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 507 ms