RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W SPP41P38904 1435 aa1.61□□□□□ -2.15
CBF2YGR140W GSP1P32835 219 aaKnown RBP1.61□□□□□ -2.15
CBF2YGR140W GSP2P32836 220 aaKnown RBP1.61□□□□□ -2.15
CBF2YGR140W YEL028WP39989 153 aa1.61□□□□□ -2.15
CBF2YGR140W MOB1P40484 314 aa1.61□□□□□ -2.15
CBF2YGR140W YJL218WP40892 196 aaKnown RBP1.61□□□□□ -2.15
CBF2YGR140W BUD25P85052 153 aa1.61□□□□□ -2.15
CBF2YGR140W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
CBF2YGR140W KIN28P06242 306 aa1.6□□□□□ -2.15
CBF2YGR140W RGI1P40043 161 aaPredicted RBP1.6□□□□□ -2.15
CBF2YGR140W HPM1P40481 377 aa1.6□□□□□ -2.15
CBF2YGR140W SMD3P43321 101 aaKnown RBP1.6□□□□□ -2.15
CBF2YGR140W DOC1P53068 250 aa1.6□□□□□ -2.15
CBF2YGR140W ATP19P81451 68 aa1.6□□□□□ -2.15
CBF2YGR140W ATP20Q12233 115 aa1.6□□□□□ -2.15
CBF2YGR140W YLR118CQ12354 227 aa1.6□□□□□ -2.15
CBF2YGR140W HSP12P22943 109 aaKnown RBP1.6□□□□□ -2.15
CBF2YGR140W RRT1P38192 103 aa1.6□□□□□ -2.15
CBF2YGR140W YNL217WP40152 326 aa1.6□□□□□ -2.15
CBF2YGR140W MPC1P53157 130 aaKnown RBP1.6□□□□□ -2.15
CBF2YGR140W AIM36Q03798 255 aa1.6□□□□□ -2.15
CBF2YGR140W CUE4Q04201 117 aaPredicted RBP1.6□□□□□ -2.15
CBF2YGR140W RIM9Q04734 239 aa1.6□□□□□ -2.15
CBF2YGR140W DUR1,2P32528 1835 aaKnown RBP1.6□□□□□ -2.15
CBF2YGR140W YOR304C-AO14468 76 aa1.59□□□□□ -2.15
CBF2YGR140W RPL26AP05743 127 aaKnown RBP1.59□□□□□ -2.15
CBF2YGR140W UTP11P34247 250 aaPredicted RBP1.59□□□□□ -2.15
CBF2YGR140W SHB17P36136 271 aaKnown RBP1.59□□□□□ -2.15
CBF2YGR140W YBR209WP38311 105 aa1.59□□□□□ -2.15
CBF2YGR140W ERV15P38312 142 aa1.59□□□□□ -2.15
CBF2YGR140W ERG25P53045 309 aa1.59□□□□□ -2.15
CBF2YGR140W RPL26BP53221 127 aaKnown RBP1.59□□□□□ -2.15
CBF2YGR140W RDS3Q06835 107 aaPredicted RBP1.59□□□□□ -2.15
CBF2YGR140W ADE6P38972 1358 aaKnown RBP1.59□□□□□ -2.15
CBF2YGR140W KRE1P17260 313 aa1.59□□□□□ -2.16
CBF2YGR140W ETR1P38071 380 aa1.59□□□□□ -2.16
CBF2YGR140W YEL073CP39974 107 aa1.59□□□□□ -2.16
CBF2YGR140W YNL200CP40165 246 aaKnown RBP1.59□□□□□ -2.16
CBF2YGR140W MPC3P53311 146 aa1.59□□□□□ -2.16
CBF2YGR140W SAY1P53324 424 aa1.59□□□□□ -2.16
CBF2YGR140W YNR077CP53758 84 aa1.59□□□□□ -2.16
CBF2YGR140W SKI3P17883 1432 aaKnown RBP1.59□□□□□ -2.16
CBF2YGR140W TY1B-HO13535 1793 aa1.58□□□□□ -2.16
CBF2YGR140W TIR3P40552 269 aa1.58□□□□□ -2.16
CBF2YGR140W UPS3Q04006 179 aa1.58□□□□□ -2.16
CBF2YGR140W KTI11Q3E840 82 aa1.58□□□□□ -2.16
CBF2YGR140W TSC11P40061 1430 aa1.58□□□□□ -2.16
CBF2YGR140W YGL041W-AP0C5N3 154 aa1.58□□□□□ -2.16
CBF2YGR140W SFT1P43682 97 aa1.58□□□□□ -2.16
CBF2YGR140W YOR289WQ12012 251 aaPredicted RBP1.58□□□□□ -2.16
CBF2YGR140W YOR015WQ12169 119 aa1.58□□□□□ -2.16
CBF2YGR140W YLR099W-AQ3E798 87 aa1.58□□□□□ -2.16
CBF2YGR140W YLR236CA0A023PZG4 107 aa1.57□□□□□ -2.16
CBF2YGR140W PEX4P29340 183 aa1.57□□□□□ -2.16
CBF2YGR140W SFT2P38166 215 aa1.57□□□□□ -2.16
CBF2YGR140W ELC1Q03071 99 aa1.57□□□□□ -2.16
CBF2YGR140W YML079WQ03629 201 aa1.57□□□□□ -2.16
CBF2YGR140W RUB1Q03919 77 aa1.57□□□□□ -2.16
CBF2YGR140W LDB18Q07887 179 aa1.57□□□□□ -2.16
CBF2YGR140W MDH2P22133 377 aa1.57□□□□□ -2.16
CBF2YGR140W MIG1P27705 504 aa1.57□□□□□ -2.16
CBF2YGR140W YER137CP40083 148 aaKnown RBP1.57□□□□□ -2.16
CBF2YGR140W GEP7P53171 287 aa1.57□□□□□ -2.16
CBF2YGR140W YHP1Q04116 353 aa1.57□□□□□ -2.16
CBF2YGR140W ANT1Q06497 328 aa1.57□□□□□ -2.16
CBF2YGR140W YPR195CQ06594 109 aa1.57□□□□□ -2.16
CBF2YGR140W YPR013CQ12145 317 aa1.57□□□□□ -2.16
CBF2YGR140W YPR096CO13587 100 aa1.57□□□□□ -2.16
CBF2YGR140W RAS2P01120 322 aaKnown RBP1.57□□□□□ -2.16
CBF2YGR140W NMT1P14743 455 aa1.57□□□□□ -2.16
CBF2YGR140W PHO88P38264 188 aaPredicted RBP1.57□□□□□ -2.16
CBF2YGR140W DML1Q03652 475 aa1.57□□□□□ -2.16
CBF2YGR140W ATG10Q07879 167 aa1.57□□□□□ -2.16
CBF2YGR140W RAD28Q12021 506 aa1.57□□□□□ -2.16
CBF2YGR140W DDI2P0CH63 225 aa1.56□□□□□ -2.16
CBF2YGR140W DDI3P0CH64 225 aa1.56□□□□□ -2.16
CBF2YGR140W NOP1P15646 327 aaKnown RBP1.56□□□□□ -2.16
CBF2YGR140W YER084WP40057 128 aa1.56□□□□□ -2.16
CBF2YGR140W YPR174CQ06616 221 aaPredicted RBP1.56□□□□□ -2.16
CBF2YGR140W HYM1P32464 399 aa1.56□□□□□ -2.16
CBF2YGR140W FMT1P32785 401 aa1.56□□□□□ -2.16
CBF2YGR140W RPL14AP36105 138 aaKnown RBP1.56□□□□□ -2.16
CBF2YGR140W RPL14BP38754 138 aaKnown RBP1.56□□□□□ -2.16
CBF2YGR140W PHS1P40857 217 aa1.56□□□□□ -2.16
CBF2YGR140W ALB1P47019 175 aaPredicted RBP1.56□□□□□ -2.16
CBF2YGR140W YJL027CP47063 138 aaPredicted RBP1.56□□□□□ -2.16
CBF2YGR140W BOL2P53082 120 aa1.56□□□□□ -2.16
CBF2YGR140W YDR102CQ03864 110 aa1.56□□□□□ -2.16
CBF2YGR140W DDR48P18899 430 aaKnown RBP1.55□□□□□ -2.16
CBF2YGR140W UGX2P32772 223 aa1.55□□□□□ -2.16
CBF2YGR140W YOR062CP36025 268 aa1.55□□□□□ -2.16
CBF2YGR140W YRA2P36036 203 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
CBF2YGR140W FLX1P40464 311 aa1.55□□□□□ -2.16
CBF2YGR140W LSM8P47093 109 aaKnown RBP1.55□□□□□ -2.16
CBF2YGR140W TMA23Q03525 211 aa1.55□□□□□ -2.16
CBF2YGR140W KEI1Q06346 221 aa1.55□□□□□ -2.16
CBF2YGR140W RAF1Q06891 181 aa1.55□□□□□ -2.16
CBF2YGR140W FCF2Q12035 217 aaPredicted RBP1.55□□□□□ -2.16
CBF2YGR140W FYV7Q12247 151 aa1.55□□□□□ -2.16
CBF2YGR140W MSB2P32334 1306 aa1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms