RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W FPR1P20081 114 aaKnown RBP3.56□□□□□ -1.84
PRE9YGR135W AIM17P23180 465 aaKnown RBP3.56□□□□□ -1.84
PRE9YGR135W SCO1P23833 295 aa3.56□□□□□ -1.84
PRE9YGR135W YGL010WP25338 174 aa3.56□□□□□ -1.84
PRE9YGR135W PEX4P29340 183 aa3.56□□□□□ -1.84
PRE9YGR135W OCH1P31755 480 aa3.56□□□□□ -1.84
PRE9YGR135W SHB17P36136 271 aaKnown RBP3.56□□□□□ -1.84
PRE9YGR135W DOG1P38774 246 aa3.56□□□□□ -1.84
PRE9YGR135W YHR180WP38868 163 aa3.56□□□□□ -1.84
PRE9YGR135W RPB11P38902 120 aa3.56□□□□□ -1.84
PRE9YGR135W CIN5P40917 295 aa3.56□□□□□ -1.84
PRE9YGR135W GPI2P46961 280 aa3.56□□□□□ -1.84
PRE9YGR135W YJL028WP47062 111 aa3.56□□□□□ -1.84
PRE9YGR135W RPL15BP54780 204 aaPredicted RBP3.56□□□□□ -1.84
PRE9YGR135W RPL21AQ02753 160 aaKnown RBP3.56□□□□□ -1.84
PRE9YGR135W UPS3Q04006 179 aa3.56□□□□□ -1.84
PRE9YGR135W YDL157CQ12082 118 aa3.56□□□□□ -1.84
PRE9YGR135W DAP1Q12091 152 aa3.56□□□□□ -1.84
PRE9YGR135W FRE8Q12209 686 aa3.56□□□□□ -1.84
PRE9YGR135W RPL21BQ12672 160 aaKnown RBP3.56□□□□□ -1.84
PRE9YGR135W YCR024C-BQ3E7Z8 88 aa3.56□□□□□ -1.84
PRE9YGR135W DDI2P0CH63 225 aa3.55□□□□□ -1.84
PRE9YGR135W DDI3P0CH64 225 aa3.55□□□□□ -1.84
PRE9YGR135W YER190C-BP0CX94 160 aa3.55□□□□□ -1.84
PRE9YGR135W YEL077W-AP0CX95 160 aa3.55□□□□□ -1.84
PRE9YGR135W YGR296C-BP0CX96 160 aa3.55□□□□□ -1.84
PRE9YGR135W YPL283W-BP0CX97 160 aa3.55□□□□□ -1.84
PRE9YGR135W YPR204C-AP0CX98 160 aa3.55□□□□□ -1.84
PRE9YGR135W PCL1P24867 279 aa3.55□□□□□ -1.84
PRE9YGR135W SUA7P29055 345 aaPredicted RBP3.55□□□□□ -1.84
PRE9YGR135W SPS18P32572 300 aa3.55□□□□□ -1.84
PRE9YGR135W PMU1P36069 295 aa3.55□□□□□ -1.84
PRE9YGR135W PRS4P38063 326 aaPredicted RBP3.55□□□□□ -1.84
PRE9YGR135W AME1P38313 324 aa3.55□□□□□ -1.84
PRE9YGR135W WSC4P38739 605 aa3.55□□□□□ -1.84
PRE9YGR135W YER134CP40081 178 aa3.55□□□□□ -1.84
PRE9YGR135W YGR269WP40326 108 aa3.55□□□□□ -1.84
PRE9YGR135W CPD1P53314 239 aa3.55□□□□□ -1.84
PRE9YGR135W PDR17P53844 350 aa3.55□□□□□ -1.84
PRE9YGR135W HRI1Q05905 244 aaKnown RBP3.55□□□□□ -1.84
PRE9YGR135W NAT3Q06504 195 aa3.55□□□□□ -1.84
PRE9YGR135W YPR174CQ06616 221 aaPredicted RBP3.55□□□□□ -1.84
PRE9YGR135W RFU1Q08003 200 aa3.55□□□□□ -1.84
PRE9YGR135W YPR108W-AQ3E7B3 70 aa3.55□□□□□ -1.84
PRE9YGR135W HUG1Q6Q5K6 68 aa3.55□□□□□ -1.84
PRE9YGR135W NAG1Q8TGN9 163 aa3.55□□□□□ -1.84
PRE9YGR135W FLO9P39712 1322 aa3.54□□□□□ -1.84
PRE9YGR135W RPS22AP0C0W1 130 aaKnown RBP3.54□□□□□ -1.84
PRE9YGR135W SPT15P13393 240 aaKnown RBP3.54□□□□□ -1.84
PRE9YGR135W QCR9P22289 66 aa3.54□□□□□ -1.84
PRE9YGR135W AGA1P32323 725 aa3.54□□□□□ -1.84
PRE9YGR135W SRP21P32342 167 aa3.54□□□□□ -1.84
PRE9YGR135W GSP1P32835 219 aaKnown RBP3.54□□□□□ -1.84
PRE9YGR135W GSP2P32836 220 aaKnown RBP3.54□□□□□ -1.84
PRE9YGR135W RPB7P34087 171 aa3.54□□□□□ -1.84
PRE9YGR135W YBL059WP34224 193 aa3.54□□□□□ -1.84
PRE9YGR135W YND1P40009 630 aa3.54□□□□□ -1.84
PRE9YGR135W COX15P40086 486 aa3.54□□□□□ -1.84
PRE9YGR135W YIL029CP40538 142 aa3.54□□□□□ -1.84
PRE9YGR135W CUP9P41817 306 aa3.54□□□□□ -1.84
PRE9YGR135W WWM1P43582 211 aaKnown RBP3.54□□□□□ -1.84
PRE9YGR135W THG1P53215 237 aaKnown RBP3.54□□□□□ -1.84
PRE9YGR135W CRH1P53301 507 aa3.54□□□□□ -1.84
PRE9YGR135W YPL077CQ02831 240 aa3.54□□□□□ -1.84
PRE9YGR135W YMR166CQ03829 368 aa3.54□□□□□ -1.84
PRE9YGR135W TSA2Q04120 196 aa3.54□□□□□ -1.84
PRE9YGR135W YPR147CQ06522 304 aaKnown RBP3.54□□□□□ -1.84
PRE9YGR135W YOL024WQ08172 172 aa3.54□□□□□ -1.84
PRE9YGR135W YOL029CQ08187 201 aa3.54□□□□□ -1.84
PRE9YGR135W HUT1Q12520 339 aa3.54□□□□□ -1.84
PRE9YGR135W MBF1O14467 151 aaKnown RBP3.53□□□□□ -1.84
PRE9YGR135W PIS1P06197 220 aaKnown RBP3.53□□□□□ -1.84
PRE9YGR135W CPR1P14832 162 aaKnown RBP3.53□□□□□ -1.84
PRE9YGR135W RPL16AP26784 199 aaKnown RBP3.53□□□□□ -1.84
PRE9YGR135W IES6P32617 166 aa3.53□□□□□ -1.84
PRE9YGR135W SRP14P38985 146 aa3.53□□□□□ -1.84
PRE9YGR135W TEM1P38987 245 aa3.53□□□□□ -1.84
PRE9YGR135W PRE5P40302 234 aaKnown RBP3.53□□□□□ -1.84
PRE9YGR135W RPA43P46669 326 aa3.53□□□□□ -1.84
PRE9YGR135W NCA3P46955 337 aa3.53□□□□□ -1.84
PRE9YGR135W XPT1P47165 209 aa3.53□□□□□ -1.84
PRE9YGR135W YPL039WQ03080 316 aa3.53□□□□□ -1.84
PRE9YGR135W DIG2Q03373 323 aaKnown RBP3.53□□□□□ -1.84
PRE9YGR135W YDR209CQ03480 137 aa3.53□□□□□ -1.84
PRE9YGR135W YMR007WQ03675 126 aa3.53□□□□□ -1.84
PRE9YGR135W IRC19Q07843 230 aa3.53□□□□□ -1.84
PRE9YGR135W YOR105WQ08504 108 aa3.53□□□□□ -1.84
PRE9YGR135W YPL162CQ12042 273 aa3.53□□□□□ -1.84
PRE9YGR135W YRA1Q12159 226 aaKnown RBP3.53□□□□□ -1.84
PRE9YGR135W SAL1D6W196 494 aa3.52□□□□□ -1.85
PRE9YGR135W RPL16BP26785 198 aaKnown RBP3.52□□□□□ -1.85
PRE9YGR135W PRY2P36110 329 aa3.52□□□□□ -1.85
PRE9YGR135W MED6P38782 295 aa3.52□□□□□ -1.85
PRE9YGR135W RPF1P38805 295 aaKnown RBP3.52□□□□□ -1.85
PRE9YGR135W PFS1P38872 237 aa3.52□□□□□ -1.85
PRE9YGR135W BDH1P39714 382 aa3.52□□□□□ -1.85
PRE9YGR135W CYB5P40312 120 aa3.52□□□□□ -1.85
PRE9YGR135W LCB3P47013 409 aa3.52□□□□□ -1.85
PRE9YGR135W TRM9P49957 279 aa3.52□□□□□ -1.85
PRE9YGR135W MIC26P50087 233 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 73.4 ms