RNA–Protein interactions for RNA: YGR041W

BUD9, Transcript of Protein involved in bud-site selection, yeast

Gene BUD9, Length 1,644 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD9	YGR041W	CKS1	P20486	150 aa	Known RBP	5	□□□□□ -1.61
BUD9	YGR041W	SFC1	P33303	322 aa		5	□□□□□ -1.61
BUD9	YGR041W	TMA19	P35691	167 aa	Known RBP	5	□□□□□ -1.61
BUD9	YGR041W	RPS12	P48589	143 aa	Known RBP	5	□□□□□ -1.61
BUD9	YGR041W	UFD1	P53044	361 aa		5	□□□□□ -1.61
BUD9	YGR041W	YGL101W	P53144	215 aa		5	□□□□□ -1.61
BUD9	YGR041W	YPR170W-B	P0C5R9	85 aa		4.99	□□□□□ -1.61
BUD9	YGR041W	RRT13	P40042	185 aa		4.99	□□□□□ -1.61
BUD9	YGR041W	TIR3	P40552	269 aa		4.99	□□□□□ -1.61
BUD9	YGR041W	EMC4	P53073	190 aa		4.99	□□□□□ -1.61
BUD9	YGR041W	YDR249C	Q03787	373 aa		4.99	□□□□□ -1.61
BUD9	YGR041W	ATG41	Q12048	136 aa		4.99	□□□□□ -1.61
BUD9	YGR041W	YDL211C	Q12121	372 aa		4.99	□□□□□ -1.61
BUD9	YGR041W	PSF1	Q12488	208 aa		4.99	□□□□□ -1.61
BUD9	YGR041W	YAL067W-A	Q8TGK6	75 aa		4.99	□□□□□ -1.61
BUD9	YGR041W	UBI4	P0CG63	381 aa	Known RBP	4.98	□□□□□ -1.61
BUD9	YGR041W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
BUD9	YGR041W	GPI18	P38211	433 aa		4.98	□□□□□ -1.61
BUD9	YGR041W	YGP1	P38616	354 aa	Known RBP	4.98	□□□□□ -1.61
BUD9	YGR041W	APQ12	P40532	138 aa		4.98	□□□□□ -1.61
BUD9	YGR041W	YGL194C-A	Q2V2P6	80 aa		4.98	□□□□□ -1.61
BUD9	YGR041W	TSC3	Q3E790	80 aa		4.98	□□□□□ -1.61
BUD9	YGR041W	VPS13	Q07878	3144 aa		4.98	□□□□□ -1.61
BUD9	YGR041W	SPO13	P23624	291 aa		4.97	□□□□□ -1.61
BUD9	YGR041W	ECM31	P38122	312 aa		4.97	□□□□□ -1.61
BUD9	YGR041W	PAU24	P38155	120 aa		4.97	□□□□□ -1.61
BUD9	YGR041W	MED6	P38782	295 aa		4.97	□□□□□ -1.61
BUD9	YGR041W	HTD2	P38790	280 aa	Known RBP	4.97	□□□□□ -1.61
BUD9	YGR041W	AIM2	P39721	246 aa		4.97	□□□□□ -1.61
BUD9	YGR041W	PHB1	P40961	287 aa		4.97	□□□□□ -1.61
BUD9	YGR041W	CAX4	P53223	239 aa		4.97	□□□□□ -1.61
BUD9	YGR041W	YLR099W-A	Q3E798	87 aa		4.97	□□□□□ -1.61
BUD9	YGR041W	YFR032C-B	Q8TGU2	87 aa		4.97	□□□□□ -1.61
BUD9	YGR041W	RPL2A	P0CX45	254 aa	Known RBP	4.97	□□□□□ -1.61
BUD9	YGR041W	RPL2B	P0CX46	254 aa	Known RBP	4.97	□□□□□ -1.61
BUD9	YGR041W	SUA7	P29055	345 aa	Predicted RBP	4.97	□□□□□ -1.61
BUD9	YGR041W	YJR015W	P47090	510 aa		4.97	□□□□□ -1.61
BUD9	YGR041W	BAT2	P47176	376 aa	Known RBP	4.97	□□□□□ -1.61
BUD9	YGR041W	SDT1	P53078	280 aa		4.97	□□□□□ -1.61
BUD9	YGR041W	YOR289W	Q12012	251 aa	Predicted RBP	4.97	□□□□□ -1.61
BUD9	YGR041W	PRR2	Q12310	699 aa		4.97	□□□□□ -1.61
BUD9	YGR041W	ISD11	Q6Q560	94 aa		4.97	□□□□□ -1.61
BUD9	YGR041W	RPB9	P27999	122 aa		4.96	□□□□□ -1.62
BUD9	YGR041W	SFK1	P35735	353 aa		4.96	□□□□□ -1.62
BUD9	YGR041W	YAR068W	P39564	161 aa		4.96	□□□□□ -1.62
BUD9	YGR041W	YEA4	P40004	342 aa		4.96	□□□□□ -1.62
BUD9	YGR041W	PAM16	P42949	149 aa		4.96	□□□□□ -1.62
BUD9	YGR041W	PAU12	P53343	120 aa		4.96	□□□□□ -1.62
BUD9	YGR041W	HHT1	P61830	136 aa		4.96	□□□□□ -1.62
BUD9	YGR041W	SPC3	Q12133	184 aa		4.96	□□□□□ -1.62
BUD9	YGR041W	REP2	P03872	296 aa		4.95	□□□□□ -1.62
BUD9	YGR041W	YGL041W-A	P0C5N3	154 aa		4.95	□□□□□ -1.62
BUD9	YGR041W	PRS3	P38689	320 aa	Known RBP	4.95	□□□□□ -1.62
BUD9	YGR041W	SWM2	P40342	146 aa		4.95	□□□□□ -1.62
BUD9	YGR041W	SKI6	P46948	246 aa	Predicted RBP	4.95	□□□□□ -1.62
BUD9	YGR041W	UBC7	Q02159	165 aa		4.95	□□□□□ -1.62
BUD9	YGR041W	KEI1	Q06346	221 aa		4.95	□□□□□ -1.62
BUD9	YGR041W	YPD1	Q07688	167 aa		4.95	□□□□□ -1.62
BUD9	YGR041W	MSB2	P32334	1306 aa		4.95	□□□□□ -1.62
BUD9	YGR041W	YOL162W	P0CF19	215 aa		4.94	□□□□□ -1.62
BUD9	YGR041W	RPS20	P38701	121 aa	Known RBP	4.94	□□□□□ -1.62
BUD9	YGR041W	ECM34	P38728	170 aa		4.94	□□□□□ -1.62
BUD9	YGR041W	TIF34	P40217	347 aa	Known RBP	4.94	□□□□□ -1.62
BUD9	YGR041W	RFC2	P40348	353 aa		4.94	□□□□□ -1.62
BUD9	YGR041W	DOC1	P53068	250 aa		4.94	□□□□□ -1.62
BUD9	YGR041W	YGL088W	P53151	121 aa		4.94	□□□□□ -1.62
BUD9	YGR041W	RSM27	P53305	110 aa		4.94	□□□□□ -1.62
BUD9	YGR041W	MRX8	Q05473	314 aa		4.94	□□□□□ -1.62
BUD9	YGR041W	ADH3	P07246	375 aa	Known RBP	4.94	□□□□□ -1.62
BUD9	YGR041W	LDB16	P25587	256 aa		4.94	□□□□□ -1.62
BUD9	YGR041W	YMR252C	Q04814	134 aa		4.94	□□□□□ -1.62
BUD9	YGR041W	YDL180W	Q12301	547 aa		4.94	□□□□□ -1.62
BUD9	YGR041W	BET1	P22804	142 aa		4.93	□□□□□ -1.62
BUD9	YGR041W	PAU2	P32612	120 aa		4.93	□□□□□ -1.62
BUD9	YGR041W	COS8	P38723	381 aa		4.93	□□□□□ -1.62
BUD9	YGR041W	GLR1	P41921	483 aa	Known RBP	4.93	□□□□□ -1.62
BUD9	YGR041W	PGU1	P47180	361 aa		4.93	□□□□□ -1.62
BUD9	YGR041W	SAY1	P53324	424 aa		4.93	□□□□□ -1.62
BUD9	YGR041W	CBP6	P07253	162 aa	Predicted RBP	4.92	□□□□□ -1.62
BUD9	YGR041W	COX9	P07255	59 aa		4.92	□□□□□ -1.62
BUD9	YGR041W	RPB3	P16370	318 aa	Known RBP	4.92	□□□□□ -1.62
BUD9	YGR041W	EMP24	P32803	203 aa	Known RBP	4.92	□□□□□ -1.62
BUD9	YGR041W	NSG1	P38837	291 aa		4.92	□□□□□ -1.62
BUD9	YGR041W	KRE9	P39005	276 aa		4.92	□□□□□ -1.62
BUD9	YGR041W	TDA4	P47153	279 aa		4.92	□□□□□ -1.62
BUD9	YGR041W	XPT1	P47165	209 aa		4.92	□□□□□ -1.62
BUD9	YGR041W	SOL1	P50278	321 aa		4.92	□□□□□ -1.62
BUD9	YGR041W	WIP1	Q2V2P8	89 aa		4.92	□□□□□ -1.62
BUD9	YGR041W	MRPL27	P36526	146 aa	Predicted RBP	4.91	□□□□□ -1.62
BUD9	YGR041W	GPI14	P47088	403 aa	Known RBP	4.91	□□□□□ -1.62
BUD9	YGR041W	THI74	Q04083	370 aa		4.91	□□□□□ -1.62
BUD9	YGR041W	YMR320W	Q04897	101 aa		4.91	□□□□□ -1.62
BUD9	YGR041W	ANT1	Q06497	328 aa		4.91	□□□□□ -1.62
BUD9	YGR041W	Q0255	P03881	472 aa		4.9	□□□□□ -1.62
BUD9	YGR041W	YLR156W	P0CE96	114 aa		4.9	□□□□□ -1.62
BUD9	YGR041W	YLR159W	P0CE97	114 aa		4.9	□□□□□ -1.62
BUD9	YGR041W	YLR161W	P0CE98	114 aa		4.9	□□□□□ -1.62
BUD9	YGR041W	URA5	P13298	226 aa	Known RBP	4.9	□□□□□ -1.62
BUD9	YGR041W	STP22	P25604	385 aa		4.9	□□□□□ -1.62
BUD9	YGR041W	OCH1	P31755	480 aa		4.9	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms