RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W TIP1P27654 210 aaPredicted RBP4.83□□□□□ -1.64
MSP1YGR028W NRG2P38082 220 aa4.83□□□□□ -1.64
MSP1YGR028W HCH1P53834 153 aa4.83□□□□□ -1.64
MSP1YGR028W IZH1Q03419 316 aa4.83□□□□□ -1.64
MSP1YGR028W SCW10Q04951 389 aa4.83□□□□□ -1.64
MSP1YGR028W RRT7Q07829 113 aa4.83□□□□□ -1.64
MSP1YGR028W AIM45Q12480 344 aaKnown RBP4.83□□□□□ -1.64
MSP1YGR028W AGC1Q12482 902 aa4.83□□□□□ -1.64
MSP1YGR028W FCY2P17064 533 aa4.82□□□□□ -1.64
MSP1YGR028W YCR043CP25361 127 aa4.82□□□□□ -1.64
MSP1YGR028W ALK2P32789 676 aaPredicted RBP4.82□□□□□ -1.64
MSP1YGR028W YBL071CP38185 102 aa4.82□□□□□ -1.64
MSP1YGR028W ARO8P53090 500 aaKnown RBP4.82□□□□□ -1.64
MSP1YGR028W RRG8Q06109 277 aa4.82□□□□□ -1.64
MSP1YGR028W DCS1Q06151 350 aa4.82□□□□□ -1.64
MSP1YGR028W ATG39Q06159 398 aa4.82□□□□□ -1.64
MSP1YGR028W FRQ1Q06389 190 aa4.82□□□□□ -1.64
MSP1YGR028W COA2Q3E823 68 aa4.82□□□□□ -1.64
MSP1YGR028W YBR085C-AO43137 85 aa4.81□□□□□ -1.64
MSP1YGR028W RPL42AP0CX27 106 aaKnown RBP4.81□□□□□ -1.64
MSP1YGR028W RPL42BP0CX28 106 aaKnown RBP4.81□□□□□ -1.64
MSP1YGR028W SRL3P36167 246 aa4.81□□□□□ -1.64
MSP1YGR028W HXT14P42833 540 aa4.81□□□□□ -1.64
MSP1YGR028W YGR018CP53211 109 aa4.81□□□□□ -1.64
MSP1YGR028W YIF1P53845 314 aaKnown RBP4.81□□□□□ -1.64
MSP1YGR028W YMR090WQ04304 227 aaKnown RBP4.81□□□□□ -1.64
MSP1YGR028W TIM18Q08749 192 aa4.81□□□□□ -1.64
MSP1YGR028W YPL264CQ08980 353 aa4.81□□□□□ -1.64
MSP1YGR028W ARG80P07249 177 aa4.8□□□□□ -1.64
MSP1YGR028W YCR022CP25620 114 aa4.8□□□□□ -1.64
MSP1YGR028W PPQ1P32945 549 aa4.8□□□□□ -1.64
MSP1YGR028W AVT5P38176 459 aa4.8□□□□□ -1.64
MSP1YGR028W UIP3P39547 235 aa4.8□□□□□ -1.64
MSP1YGR028W POR2P40478 281 aa4.8□□□□□ -1.64
MSP1YGR028W AGX1P43567 385 aa4.8□□□□□ -1.64
MSP1YGR028W YJL027CP47063 138 aaPredicted RBP4.8□□□□□ -1.64
MSP1YGR028W YGR025WP53216 100 aa4.8□□□□□ -1.64
MSP1YGR028W LST7P53237 242 aa4.8□□□□□ -1.64
MSP1YGR028W OCA2P53949 197 aa4.8□□□□□ -1.64
MSP1YGR028W YPS3Q12303 508 aa4.8□□□□□ -1.64
MSP1YGR028W PUT1P09368 476 aa4.79□□□□□ -1.64
MSP1YGR028W RPS25BP0C0T4 108 aaKnown RBP4.79□□□□□ -1.64
MSP1YGR028W RRF1P38771 230 aa4.79□□□□□ -1.64
MSP1YGR028W RTC3P38804 111 aaPredicted RBP4.79□□□□□ -1.64
MSP1YGR028W BDH1P39714 382 aa4.79□□□□□ -1.64
MSP1YGR028W YJR015WP47090 510 aa4.79□□□□□ -1.64
MSP1YGR028W PKP2P53170 491 aa4.79□□□□□ -1.64
MSP1YGR028W ALG13P53178 202 aa4.79□□□□□ -1.64
MSP1YGR028W GPI15P53961 229 aa4.79□□□□□ -1.64
MSP1YGR028W YLR146W-AQ2V2P1 62 aa4.79□□□□□ -1.64
MSP1YGR028W RPS25AQ3E792 108 aaPredicted RBP4.79□□□□□ -1.64
MSP1YGR028W YMR316C-AI2HB70 103 aa4.78□□□□□ -1.64
MSP1YGR028W PIS1P06197 220 aaKnown RBP4.78□□□□□ -1.64
MSP1YGR028W POP5P28005 173 aa4.78□□□□□ -1.64
MSP1YGR028W TDA4P47153 279 aa4.78□□□□□ -1.64
MSP1YGR028W MIC26P50087 233 aa4.78□□□□□ -1.64
MSP1YGR028W PDR17P53844 350 aa4.78□□□□□ -1.64
MSP1YGR028W FYV6P53913 173 aa4.78□□□□□ -1.64
MSP1YGR028W MRPS16Q02608 121 aa4.78□□□□□ -1.64
MSP1YGR028W YOR011W-AQ3E807 68 aa4.78□□□□□ -1.64
MSP1YGR028W CDC7P06243 507 aa4.77□□□□□ -1.65
MSP1YGR028W DFR1P07807 211 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
MSP1YGR028W YHR213WP0CI67 198 aa4.77□□□□□ -1.65
MSP1YGR028W YPC1P38298 316 aa4.77□□□□□ -1.65
MSP1YGR028W GLE2P40066 365 aa4.77□□□□□ -1.65
MSP1YGR028W RTS2P40962 232 aa4.77□□□□□ -1.65
MSP1YGR028W RDS3Q06835 107 aaPredicted RBP4.77□□□□□ -1.65
MSP1YGR028W LDS2Q08218 356 aa4.77□□□□□ -1.65
MSP1YGR028W CSH1P38287 376 aa4.76□□□□□ -1.65
MSP1YGR028W SNF11P38956 169 aa4.76□□□□□ -1.65
MSP1YGR028W YEA6P39953 335 aa4.76□□□□□ -1.65
MSP1YGR028W RPL13BP40212 199 aaKnown RBP4.76□□□□□ -1.65
MSP1YGR028W ATG27P46989 271 aa4.76□□□□□ -1.65
MSP1YGR028W LCB3P47013 409 aa4.76□□□□□ -1.65
MSP1YGR028W ODC1Q03028 310 aa4.76□□□□□ -1.65
MSP1YGR028W ERP1Q05359 219 aaKnown RBP4.76□□□□□ -1.65
MSP1YGR028W PRM7Q12459 698 aa4.76□□□□□ -1.65
MSP1YGR028W RPL13AQ12690 199 aaPredicted RBP4.76□□□□□ -1.65
MSP1YGR028W YCR025CP25352 136 aa4.75□□□□□ -1.65
MSP1YGR028W NPL6P32832 435 aa4.75□□□□□ -1.65
MSP1YGR028W CMC1P36064 111 aa4.75□□□□□ -1.65
MSP1YGR028W SHB17P36136 271 aaKnown RBP4.75□□□□□ -1.65
MSP1YGR028W SLM6P38343 150 aa4.75□□□□□ -1.65
MSP1YGR028W YGR269WP40326 108 aa4.75□□□□□ -1.65
MSP1YGR028W YJR111CP47148 283 aaKnown RBP4.75□□□□□ -1.65
MSP1YGR028W DID2P69771 204 aa4.74□□□□□ -1.65
MSP1YGR028W COX12Q01519 83 aa4.74□□□□□ -1.65
MSP1YGR028W YMR082CQ04276 118 aa4.74□□□□□ -1.65
MSP1YGR028W SDH7Q04401 133 aa4.74□□□□□ -1.65
MSP1YGR028W AYT1Q12226 474 aa4.74□□□□□ -1.65
MSP1YGR028W YHR213W-AQ8TGT4 77 aa4.74□□□□□ -1.65
MSP1YGR028W FPR2P32472 135 aa4.73□□□□□ -1.65
MSP1YGR028W UPS2P35200 230 aa4.73□□□□□ -1.65
MSP1YGR028W GPI2P46961 280 aa4.73□□□□□ -1.65
MSP1YGR028W IMP2P46972 177 aa4.73□□□□□ -1.65
MSP1YGR028W PNC1P53184 216 aaKnown RBP4.73□□□□□ -1.65
MSP1YGR028W HST4P53688 370 aa4.73□□□□□ -1.65
MSP1YGR028W SHH3Q04487 196 aa4.73□□□□□ -1.65
MSP1YGR028W CTR3Q06686 241 aa4.73□□□□□ -1.65
MSP1YGR028W PRR2Q12310 699 aa4.73□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms