RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W RPL33BP41056 107 aaKnown RBP2.14□□□□□ -2.07
PRP18YGR006W GPI2P46961 280 aa2.14□□□□□ -2.07
PRP18YGR006W XPT1P47165 209 aa2.14□□□□□ -2.07
PRP18YGR006W YGL193CP53097 103 aa2.14□□□□□ -2.07
PRP18YGR006W SAE3P89114 91 aa2.14□□□□□ -2.07
PRP18YGR006W CWC27Q02770 301 aa2.14□□□□□ -2.07
PRP18YGR006W DIG2Q03373 323 aaKnown RBP2.14□□□□□ -2.07
PRP18YGR006W YOL014WQ08110 124 aa2.14□□□□□ -2.07
PRP18YGR006W YOR214CQ12282 236 aa2.14□□□□□ -2.07
PRP18YGR006W RPB3P16370 318 aaKnown RBP2.13□□□□□ -2.07
PRP18YGR006W PHO85P17157 305 aa2.13□□□□□ -2.07
PRP18YGR006W MDH2P22133 377 aa2.13□□□□□ -2.07
PRP18YGR006W NSG1P38837 291 aa2.13□□□□□ -2.07
PRP18YGR006W SER2P42941 309 aa2.13□□□□□ -2.07
PRP18YGR006W YDR391CQ04170 232 aa2.13□□□□□ -2.07
PRP18YGR006W MCP1Q12106 302 aa2.13□□□□□ -2.07
PRP18YGR006W YNL277W-AQ3E7Z0 62 aa2.13□□□□□ -2.07
PRP18YGR006W YML100W-AQ8TGT0 57 aa2.13□□□□□ -2.07
PRP18YGR006W TRM732Q03496 1420 aa2.13□□□□□ -2.07
PRP18YGR006W BEM2P39960 2167 aaKnown RBP2.13□□□□□ -2.07
PRP18YGR006W DUR1,2P32528 1835 aaKnown RBP2.12□□□□□ -2.07
PRP18YGR006W ADK1P07170 222 aaKnown RBP2.12□□□□□ -2.07
PRP18YGR006W HYM1P32464 399 aa2.12□□□□□ -2.07
PRP18YGR006W PTC1P35182 281 aa2.12□□□□□ -2.07
PRP18YGR006W YHR140WP38842 239 aa2.12□□□□□ -2.07
PRP18YGR006W YER181CP40097 107 aa2.12□□□□□ -2.07
PRP18YGR006W TIR3P40552 269 aa2.12□□□□□ -2.07
PRP18YGR006W YJL218WP40892 196 aaKnown RBP2.12□□□□□ -2.07
PRP18YGR006W YFL019CP43576 117 aa2.12□□□□□ -2.07
PRP18YGR006W TDA4P47153 279 aa2.12□□□□□ -2.07
PRP18YGR006W RPS12P48589 143 aaKnown RBP2.12□□□□□ -2.07
PRP18YGR006W AIM11P87275 137 aa2.12□□□□□ -2.07
PRP18YGR006W TMA23Q03525 211 aa2.12□□□□□ -2.07
PRP18YGR006W SPG3Q04398 127 aaPredicted RBP2.12□□□□□ -2.07
PRP18YGR006W URA5P13298 226 aaKnown RBP2.11□□□□□ -2.07
PRP18YGR006W YBR220CP38318 560 aa2.11□□□□□ -2.07
PRP18YGR006W SFT1P43682 97 aa2.11□□□□□ -2.07
PRP18YGR006W YNL033WP53964 284 aa2.11□□□□□ -2.07
PRP18YGR006W YNL019CP53975 284 aa2.11□□□□□ -2.07
PRP18YGR006W YMR099CQ03161 297 aaKnown RBP2.11□□□□□ -2.07
PRP18YGR006W YCL001W-BQ96VH2 84 aa2.11□□□□□ -2.07
PRP18YGR006W YER039C-AP0CD97 72 aa2.1□□□□□ -2.07
PRP18YGR006W NSP1P14907 823 aaKnown RBP2.1□□□□□ -2.07
PRP18YGR006W ATP15P21306 62 aa2.1□□□□□ -2.07
PRP18YGR006W YBL010CP32788 280 aa2.1□□□□□ -2.07
PRP18YGR006W RPL14AP36105 138 aaKnown RBP2.1□□□□□ -2.07
PRP18YGR006W UMP1P38293 148 aa2.1□□□□□ -2.07
PRP18YGR006W RPL14BP38754 138 aaKnown RBP2.1□□□□□ -2.07
PRP18YGR006W YER134CP40081 178 aa2.1□□□□□ -2.07
PRP18YGR006W BUD25P85052 153 aa2.1□□□□□ -2.07
PRP18YGR006W RTR2Q12378 196 aa2.1□□□□□ -2.07
PRP18YGR006W YLR412C-AQ3E742 68 aa2.1□□□□□ -2.07
PRP18YGR006W ESC1Q03661 1658 aaKnown RBP2.09□□□□□ -2.07
PRP18YGR006W AHT1P29589 182 aa2.09□□□□□ -2.07
PRP18YGR006W YKR070WP36151 352 aaKnown RBP2.09□□□□□ -2.07
PRP18YGR006W ETR1P38071 380 aa2.09□□□□□ -2.07
PRP18YGR006W DOC1P53068 250 aa2.09□□□□□ -2.07
PRP18YGR006W EST3Q03096 181 aa2.09□□□□□ -2.07
PRP18YGR006W NAT3Q06504 195 aa2.09□□□□□ -2.07
PRP18YGR006W ZEO1Q08245 113 aa2.09□□□□□ -2.07
PRP18YGR006W FSF1Q12029 327 aaKnown RBP2.09□□□□□ -2.07
PRP18YGR006W TRM3Q07527 1436 aa2.08□□□□□ -2.08
PRP18YGR006W YAR023CD6VPM8 179 aa2.08□□□□□ -2.08
PRP18YGR006W CPA1P07258 411 aaKnown RBP2.08□□□□□ -2.08
PRP18YGR006W YET1P35723 206 aa2.08□□□□□ -2.08
PRP18YGR006W FYV4P38783 130 aaPredicted RBP2.08□□□□□ -2.08
PRP18YGR006W YNL217WP40152 326 aa2.08□□□□□ -2.08
PRP18YGR006W SBH1P52870 82 aa2.08□□□□□ -2.08
PRP18YGR006W BOL2P53082 120 aa2.08□□□□□ -2.08
PRP18YGR006W PDR11P40550 1411 aa2.08□□□□□ -2.08
PRP18YGR006W TIM9O74700 87 aa2.07□□□□□ -2.08
PRP18YGR006W HAP2P06774 265 aa2.07□□□□□ -2.08
PRP18YGR006W YRA2P36036 203 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
PRP18YGR006W SHB17P36136 271 aaKnown RBP2.07□□□□□ -2.08
PRP18YGR006W YPT31P38555 223 aaKnown RBP2.07□□□□□ -2.08
PRP18YGR006W HTD2P38790 280 aaKnown RBP2.07□□□□□ -2.08
PRP18YGR006W YNL200CP40165 246 aaKnown RBP2.07□□□□□ -2.08
PRP18YGR006W YAE1P47118 141 aaPredicted RBP2.07□□□□□ -2.08
PRP18YGR006W EMC4P53073 190 aa2.07□□□□□ -2.08
PRP18YGR006W YGL230CP53074 147 aa2.07□□□□□ -2.08
PRP18YGR006W VPS28Q02767 242 aa2.07□□□□□ -2.08
PRP18YGR006W DML1Q03652 475 aa2.07□□□□□ -2.08
PRP18YGR006W GAL83Q04739 417 aa2.07□□□□□ -2.08
PRP18YGR006W SML1Q04964 104 aa2.07□□□□□ -2.08
PRP18YGR006W FYV12Q08559 129 aa2.07□□□□□ -2.08
PRP18YGR006W VAR1P02381 398 aa2.06□□□□□ -2.08
PRP18YGR006W GPA2P10823 449 aa2.06□□□□□ -2.08
PRP18YGR006W YBR242WP38331 238 aa2.06□□□□□ -2.08
PRP18YGR006W MOB1P40484 314 aa2.06□□□□□ -2.08
PRP18YGR006W GVP36P40531 326 aaKnown RBP2.06□□□□□ -2.08
PRP18YGR006W GAT4P40569 121 aa2.06□□□□□ -2.08
PRP18YGR006W PAC10P48363 199 aa2.06□□□□□ -2.08
PRP18YGR006W YDR274CP87283 123 aa2.06□□□□□ -2.08
PRP18YGR006W YKR005CQ02203 525 aa2.06□□□□□ -2.08
PRP18YGR006W SYM1Q06563 197 aa2.06□□□□□ -2.08
PRP18YGR006W FCF2Q12035 217 aaPredicted RBP2.06□□□□□ -2.08
PRP18YGR006W OCA6Q12454 224 aa2.06□□□□□ -2.08
PRP18YGR006W HUT1Q12520 339 aa2.06□□□□□ -2.08
PRP18YGR006W HSP12P22943 109 aaKnown RBP2.05□□□□□ -2.08
PRP18YGR006W MRS4P23500 304 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms