RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C ETR1P38071 380 aa2.96□□□□□ -1.94
RPB7YDR404C RMD6P39975 231 aa2.96□□□□□ -1.94
RPB7YDR404C AIM25P47140 327 aa2.96□□□□□ -1.94
RPB7YDR404C YJR146WP47174 117 aa2.96□□□□□ -1.94
RPB7YDR404C RPL9BP51401 191 aaKnown RBP2.96□□□□□ -1.94
RPB7YDR404C RPL26BP53221 127 aaKnown RBP2.96□□□□□ -1.94
RPB7YDR404C ORM1P53224 222 aa2.96□□□□□ -1.94
RPB7YDR404C FMN1Q03778 218 aa2.96□□□□□ -1.94
RPB7YDR404C YOL160WQ08321 113 aa2.96□□□□□ -1.94
RPB7YDR404C YPL225WQ08971 146 aaKnown RBP2.96□□□□□ -1.94
RPB7YDR404C USB1Q12208 290 aaKnown RBP2.96□□□□□ -1.94
RPB7YDR404C YPR096CO13587 100 aa2.95□□□□□ -1.94
RPB7YDR404C RAS2P01120 322 aaKnown RBP2.95□□□□□ -1.94
RPB7YDR404C RPL25P04456 142 aaKnown RBP2.95□□□□□ -1.94
RPB7YDR404C KSS1P14681 368 aa2.95□□□□□ -1.94
RPB7YDR404C SCM4P32564 187 aa2.95□□□□□ -1.94
RPB7YDR404C SEC72P39742 193 aaKnown RBP2.95□□□□□ -1.94
RPB7YDR404C GRE1Q08969 168 aa2.95□□□□□ -1.94
RPB7YDR404C RIO1Q12196 484 aaKnown RBP2.95□□□□□ -1.94
RPB7YDR404C MRS1P07266 363 aa2.94□□□□□ -1.94
RPB7YDR404C YLR156WP0CE96 114 aa2.94□□□□□ -1.94
RPB7YDR404C YLR159WP0CE97 114 aa2.94□□□□□ -1.94
RPB7YDR404C YLR161WP0CE98 114 aa2.94□□□□□ -1.94
RPB7YDR404C SEN2P16658 377 aa2.94□□□□□ -1.94
RPB7YDR404C GRX2P17695 143 aaKnown RBP2.94□□□□□ -1.94
RPB7YDR404C SEC17P32602 292 aa2.94□□□□□ -1.94
RPB7YDR404C CLG1P35190 452 aa2.94□□□□□ -1.94
RPB7YDR404C UTP30P36144 274 aaKnown RBP2.94□□□□□ -1.94
RPB7YDR404C YHR180WP38868 163 aa2.94□□□□□ -1.94
RPB7YDR404C EGD2P38879 174 aaKnown RBP2.94□□□□□ -1.94
RPB7YDR404C PEP8P40335 379 aa2.94□□□□□ -1.94
RPB7YDR404C SNX4P47057 423 aa2.94□□□□□ -1.94
RPB7YDR404C HRT1Q08273 121 aa2.94□□□□□ -1.94
RPB7YDR404C FIT3Q08907 204 aa2.94□□□□□ -1.94
RPB7YDR404C CDC8P00572 216 aa2.93□□□□□ -1.94
RPB7YDR404C REP2P03872 296 aa2.93□□□□□ -1.94
RPB7YDR404C YOR062CP36025 268 aa2.93□□□□□ -1.94
RPB7YDR404C DSK2P48510 373 aa2.93□□□□□ -1.94
RPB7YDR404C COG5P53951 403 aa2.93□□□□□ -1.94
RPB7YDR404C SLM2P53955 656 aa2.93□□□□□ -1.94
RPB7YDR404C PLP1Q04004 230 aa2.93□□□□□ -1.94
RPB7YDR404C YPL162CQ12042 273 aa2.93□□□□□ -1.94
RPB7YDR404C YKL068W-AQ3E826 78 aa2.93□□□□□ -1.94
RPB7YDR404C SRL3P36167 246 aa2.92□□□□□ -1.94
RPB7YDR404C MRPL49P40858 161 aaPredicted RBP2.92□□□□□ -1.94
RPB7YDR404C MCP1Q12106 302 aa2.92□□□□□ -1.94
RPB7YDR404C RPL39P04650 51 aa2.91□□□□□ -1.94
RPB7YDR404C MSW1P04803 379 aa2.91□□□□□ -1.94
RPB7YDR404C PUT1P09368 476 aa2.91□□□□□ -1.94
RPB7YDR404C MAG1P22134 296 aaKnown RBP2.91□□□□□ -1.94
RPB7YDR404C BUB2P26448 306 aaPredicted RBP2.91□□□□□ -1.94
RPB7YDR404C MDH3P32419 343 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
RPB7YDR404C CLB6P32943 380 aa2.91□□□□□ -1.94
RPB7YDR404C CAF4P36130 643 aa2.91□□□□□ -1.94
RPB7YDR404C ECM4P36156 370 aa2.91□□□□□ -1.94
RPB7YDR404C SKG1P36169 355 aa2.91□□□□□ -1.94
RPB7YDR404C FIG1P38224 298 aa2.91□□□□□ -1.94
RPB7YDR404C COS6P53344 381 aa2.91□□□□□ -1.94
RPB7YDR404C MIX17Q03667 156 aa2.91□□□□□ -1.94
RPB7YDR404C BRX1Q08235 291 aaKnown RBP2.91□□□□□ -1.94
RPB7YDR404C MHF1Q3E835 90 aa2.91□□□□□ -1.94
RPB7YDR404C YFR032C-BQ8TGU2 87 aa2.91□□□□□ -1.94
RPB7YDR404C SIR2P06700 562 aa2.9□□□□□ -1.95
RPB7YDR404C NMT1P14743 455 aa2.9□□□□□ -1.95
RPB7YDR404C YRA2P36036 203 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
RPB7YDR404C SHG1P38337 142 aa2.9□□□□□ -1.95
RPB7YDR404C POG1P40473 351 aa2.9□□□□□ -1.95
RPB7YDR404C SNO1Q03144 224 aa2.9□□□□□ -1.95
RPB7YDR404C DML1Q03652 475 aa2.9□□□□□ -1.95
RPB7YDR404C YDR102CQ03864 110 aa2.9□□□□□ -1.95
RPB7YDR404C GIM5Q04493 163 aa2.9□□□□□ -1.95
RPB7YDR404C NOC4Q06512 552 aaPredicted RBP2.9□□□□□ -1.95
RPB7YDR404C IGO2Q9P305 131 aa2.9□□□□□ -1.95
RPB7YDR404C RPC19P28000 142 aaKnown RBP2.89□□□□□ -1.95
RPB7YDR404C YBR242WP38331 238 aa2.89□□□□□ -1.95
RPB7YDR404C PAC10P48363 199 aa2.89□□□□□ -1.95
RPB7YDR404C YIP3P53633 176 aa2.89□□□□□ -1.95
RPB7YDR404C RPL22BP56628 122 aaKnown RBP2.89□□□□□ -1.95
RPB7YDR404C PET9P18239 318 aaKnown RBP2.88□□□□□ -1.95
RPB7YDR404C SNF6P18888 332 aa2.88□□□□□ -1.95
RPB7YDR404C RBL2P48606 106 aaKnown RBP2.88□□□□□ -1.95
RPB7YDR404C YNL184CP53876 108 aa2.88□□□□□ -1.95
RPB7YDR404C NRK1P53915 240 aa2.88□□□□□ -1.95
RPB7YDR404C NEJ1Q06148 342 aa2.88□□□□□ -1.95
RPB7YDR404C PRP11Q07350 266 aaPredicted RBP2.88□□□□□ -1.95
RPB7YDR404C IRC19Q07843 230 aa2.88□□□□□ -1.95
RPB7YDR404C YOR343CQ12484 108 aa2.88□□□□□ -1.95
RPB7YDR404C TIM9O74700 87 aa2.87□□□□□ -1.95
RPB7YDR404C FBA1P14540 359 aaKnown RBP2.87□□□□□ -1.95
RPB7YDR404C HSP30P25619 332 aa2.87□□□□□ -1.95
RPB7YDR404C AUA1P32450 94 aa2.87□□□□□ -1.95
RPB7YDR404C PDS1P40316 373 aaPredicted RBP2.87□□□□□ -1.95
RPB7YDR404C FIP1P45976 327 aa2.87□□□□□ -1.95
RPB7YDR404C YNR064CP53750 290 aa2.87□□□□□ -1.95
RPB7YDR404C DYN3Q04949 312 aa2.87□□□□□ -1.95
RPB7YDR404C CMC2Q3E7A4 109 aa2.87□□□□□ -1.95
RPB7YDR404C YKL018C-AQ3E7A7 99 aa2.87□□□□□ -1.95
RPB7YDR404C RPB3P16370 318 aaKnown RBP2.86□□□□□ -1.95
RPB7YDR404C BET1P22804 142 aa2.86□□□□□ -1.95
RPB7YDR404C CNB1P25296 175 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 62.7 ms