RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	EMC4	P53073	190 aa		4.73	□□□□□ -1.65
CHL4	YDR254W	GEP7	P53171	287 aa		4.73	□□□□□ -1.65
CHL4	YDR254W	YOR020W-A	Q3E824	90 aa		4.73	□□□□□ -1.65
CHL4	YDR254W	ULS1	Q08562	1619 aa		4.72	□□□□□ -1.65
CHL4	YDR254W	SGA1	P08019	549 aa		4.72	□□□□□ -1.65
CHL4	YDR254W	YPR170W-B	P0C5R9	85 aa		4.72	□□□□□ -1.65
CHL4	YDR254W	RPB3	P16370	318 aa	Known RBP	4.72	□□□□□ -1.65
CHL4	YDR254W	MRS4	P23500	304 aa		4.72	□□□□□ -1.65
CHL4	YDR254W	TOM40	P23644	387 aa	Known RBP	4.72	□□□□□ -1.65
CHL4	YDR254W	ZRT3	P34240	503 aa		4.72	□□□□□ -1.65
CHL4	YDR254W	GAT4	P40569	121 aa		4.72	□□□□□ -1.65
CHL4	YDR254W	PHS1	P40857	217 aa		4.72	□□□□□ -1.65
CHL4	YDR254W	BAT2	P47176	376 aa	Known RBP	4.72	□□□□□ -1.65
CHL4	YDR254W	EST3	Q03096	181 aa		4.72	□□□□□ -1.65
CHL4	YDR254W	YOL014W	Q08110	124 aa		4.72	□□□□□ -1.65
CHL4	YDR254W	NIP7	Q08962	181 aa	Known RBP	4.72	□□□□□ -1.65
CHL4	YDR254W	ISD11	Q6Q560	94 aa		4.72	□□□□□ -1.65
CHL4	YDR254W	YML100W-A	Q8TGT0	57 aa		4.72	□□□□□ -1.65
CHL4	YDR254W	COX10	P21592	462 aa		4.71	□□□□□ -1.66
CHL4	YDR254W	BET1	P22804	142 aa		4.71	□□□□□ -1.66
CHL4	YDR254W	ARO2	P28777	376 aa	Known RBP	4.71	□□□□□ -1.66
CHL4	YDR254W	SCM4	P32564	187 aa		4.71	□□□□□ -1.66
CHL4	YDR254W	OM14	P38325	134 aa		4.71	□□□□□ -1.66
CHL4	YDR254W	HTD2	P38790	280 aa	Known RBP	4.71	□□□□□ -1.66
CHL4	YDR254W	YAR029W	P39549	74 aa		4.71	□□□□□ -1.66
CHL4	YDR254W	PFS2	P42841	465 aa	Known RBP	4.71	□□□□□ -1.66
CHL4	YDR254W	OSH6	Q02201	448 aa		4.71	□□□□□ -1.66
CHL4	YDR254W	KEI1	Q06346	221 aa		4.71	□□□□□ -1.66
CHL4	YDR254W	YPR063C	Q12160	140 aa		4.71	□□□□□ -1.66
CHL4	YDR254W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.7	□□□□□ -1.66
CHL4	YDR254W	RAD10	P06838	210 aa		4.7	□□□□□ -1.66
CHL4	YDR254W	HSP12	P22943	109 aa	Known RBP	4.7	□□□□□ -1.66
CHL4	YDR254W	SHE1	P38200	338 aa		4.7	□□□□□ -1.66
CHL4	YDR254W	YER188W	P40103	239 aa		4.7	□□□□□ -1.66
CHL4	YDR254W	SYS1	P41544	203 aa		4.7	□□□□□ -1.66
CHL4	YDR254W	YFL019C	P43576	117 aa		4.7	□□□□□ -1.66
CHL4	YDR254W	YGL262W	P53054	175 aa		4.7	□□□□□ -1.66
CHL4	YDR254W	YGR164W	P53291	111 aa		4.7	□□□□□ -1.66
CHL4	YDR254W	EMI1	Q04406	187 aa		4.7	□□□□□ -1.66
CHL4	YDR254W	FCF1	Q05498	189 aa	Predicted RBP	4.7	□□□□□ -1.66
CHL4	YDR254W	YOR097C	Q12274	175 aa	Predicted RBP	4.7	□□□□□ -1.66
CHL4	YDR254W	TIM22	Q12328	207 aa		4.7	□□□□□ -1.66
CHL4	YDR254W	YAL063C-A	Q3E791	96 aa		4.7	□□□□□ -1.66
CHL4	YDR254W	CAT8	P39113	1433 aa		4.7	□□□□□ -1.66
CHL4	YDR254W	YEL009C-A	A0A023PZF2	135 aa		4.69	□□□□□ -1.66
CHL4	YDR254W	HAP3	P13434	144 aa		4.69	□□□□□ -1.66
CHL4	YDR254W	TEM1	P38987	245 aa		4.69	□□□□□ -1.66
CHL4	YDR254W	YNL200C	P40165	246 aa	Known RBP	4.69	□□□□□ -1.66
CHL4	YDR254W	MPM1	P40364	252 aa		4.69	□□□□□ -1.66
CHL4	YDR254W	EAF6	P47128	113 aa		4.69	□□□□□ -1.66
CHL4	YDR254W	CLD1	P53264	445 aa		4.69	□□□□□ -1.66
CHL4	YDR254W	RCE1	Q03530	315 aa		4.69	□□□□□ -1.66
CHL4	YDR254W	YMR103C	Q04436	120 aa		4.69	□□□□□ -1.66
CHL4	YDR254W	COA4	Q05809	96 aa		4.69	□□□□□ -1.66
CHL4	YDR254W	SLD7	Q08457	257 aa		4.69	□□□□□ -1.66
CHL4	YDR254W	UIP4	Q08926	304 aa		4.69	□□□□□ -1.66
CHL4	YDR254W	YPL264C	Q08980	353 aa		4.69	□□□□□ -1.66
CHL4	YDR254W	RAD28	Q12021	506 aa		4.69	□□□□□ -1.66
CHL4	YDR254W	ADE6	P38972	1358 aa	Known RBP	4.69	□□□□□ -1.66
CHL4	YDR254W	URA5	P13298	226 aa	Known RBP	4.68	□□□□□ -1.66
CHL4	YDR254W	MRPL44	P19956	98 aa		4.68	□□□□□ -1.66
CHL4	YDR254W	MSA2	P36157	363 aa		4.68	□□□□□ -1.66
CHL4	YDR254W	AVT6	P40074	448 aa		4.68	□□□□□ -1.66
CHL4	YDR254W	YJL028W	P47062	111 aa		4.68	□□□□□ -1.66
CHL4	YDR254W	PGU1	P47180	361 aa		4.68	□□□□□ -1.66
CHL4	YDR254W	SAY1	P53324	424 aa		4.68	□□□□□ -1.66
CHL4	YDR254W	SPG3	Q04398	127 aa	Predicted RBP	4.68	□□□□□ -1.66
CHL4	YDR254W	YMR252C	Q04814	134 aa		4.68	□□□□□ -1.66
CHL4	YDR254W	DDP1	Q99321	188 aa	Known RBP	4.68	□□□□□ -1.66
CHL4	YDR254W	GDB1	Q06625	1536 aa		4.67	□□□□□ -1.66
CHL4	YDR254W	TRP1	P00912	224 aa		4.67	□□□□□ -1.66
CHL4	YDR254W	RAD6	P06104	172 aa		4.67	□□□□□ -1.66
CHL4	YDR254W	SRB6	P32570	121 aa		4.67	□□□□□ -1.66
CHL4	YDR254W	VMA11	P32842	164 aa		4.67	□□□□□ -1.66
CHL4	YDR254W	YNL208W	P40159	199 aa	Known RBP	4.67	□□□□□ -1.66
CHL4	YDR254W	YIL059C	P40520	121 aa		4.67	□□□□□ -1.66
CHL4	YDR254W	CUP9	P41817	306 aa		4.67	□□□□□ -1.66
CHL4	YDR254W	YFR045W	P43617	309 aa		4.67	□□□□□ -1.66
CHL4	YDR254W	NCA3	P46955	337 aa		4.67	□□□□□ -1.66
CHL4	YDR254W	YDR415C	Q04033	374 aa	Predicted RBP	4.67	□□□□□ -1.66
CHL4	YDR254W	SML1	Q04964	104 aa		4.67	□□□□□ -1.66
CHL4	YDR254W	ATG10	Q07879	167 aa		4.67	□□□□□ -1.66
CHL4	YDR254W	ATX2	Q12067	313 aa		4.67	□□□□□ -1.66
CHL4	YDR254W	GEA1	P47102	1408 aa	Predicted RBP	4.67	□□□□□ -1.66
CHL4	YDR254W	YSP2	Q06681	1438 aa		4.67	□□□□□ -1.66
CHL4	YDR254W	ADH3	P07246	375 aa	Known RBP	4.66	□□□□□ -1.66
CHL4	YDR254W	PAM16	P42949	149 aa		4.66	□□□□□ -1.66
CHL4	YDR254W	ERV14	P53173	138 aa		4.66	□□□□□ -1.66
CHL4	YDR254W	YLR156W	P0CE96	114 aa		4.65	□□□□□ -1.66
CHL4	YDR254W	YLR159W	P0CE97	114 aa		4.65	□□□□□ -1.66
CHL4	YDR254W	YLR161W	P0CE98	114 aa		4.65	□□□□□ -1.66
CHL4	YDR254W	YIL152W	P40455	235 aa		4.65	□□□□□ -1.66
CHL4	YDR254W	SMD1	Q02260	146 aa	Predicted RBP	4.65	□□□□□ -1.66
CHL4	YDR254W	SWC7	Q06707	132 aa		4.65	□□□□□ -1.66
CHL4	YDR254W	FYV4	P38783	130 aa	Predicted RBP	4.65	□□□□□ -1.67
CHL4	YDR254W	IPT1	P38954	527 aa		4.65	□□□□□ -1.67
CHL4	YDR254W	YAR068W	P39564	161 aa		4.65	□□□□□ -1.67
CHL4	YDR254W	YER134C	P40081	178 aa		4.65	□□□□□ -1.67
CHL4	YDR254W	RPL13B	P40212	199 aa	Known RBP	4.65	□□□□□ -1.67
CHL4	YDR254W	YJR085C	P47131	105 aa	Known RBP	4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 287.5 ms