RNA–Protein interactions for RNA: YDR246W

TRS23, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeast

Gene TRS23, Length 660 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS23	YDR246W	ATG27	P46989	271 aa		4.12	□□□□□ -1.75
TRS23	YDR246W	LST7	P53237	242 aa		4.12	□□□□□ -1.75
TRS23	YDR246W	CRH1	P53301	507 aa		4.12	□□□□□ -1.75
TRS23	YDR246W	DYN2	Q02647	92 aa		4.12	□□□□□ -1.75
TRS23	YDR246W	FRQ1	Q06389	190 aa		4.12	□□□□□ -1.75
TRS23	YDR246W	YOP1	Q12402	180 aa		4.12	□□□□□ -1.75
TRS23	YDR246W	YMR31	P19955	123 aa		4.11	□□□□□ -1.75
TRS23	YDR246W	SEC62	P21825	274 aa		4.11	□□□□□ -1.75
TRS23	YDR246W	DER1	P38307	211 aa		4.11	□□□□□ -1.75
TRS23	YDR246W	HSP10	P38910	106 aa		4.11	□□□□□ -1.75
TRS23	YDR246W	SUR2	P38992	349 aa		4.11	□□□□□ -1.75
TRS23	YDR246W	PSD1	P39006	500 aa		4.11	□□□□□ -1.75
TRS23	YDR246W	SEC24	P40482	926 aa	Known RBP	4.11	□□□□□ -1.75
TRS23	YDR246W	YFL051C	P43552	160 aa		4.11	□□□□□ -1.75
TRS23	YDR246W	DAD3	P69850	94 aa		4.11	□□□□□ -1.75
TRS23	YDR246W	CYT2	Q00873	224 aa		4.11	□□□□□ -1.75
TRS23	YDR246W	RPL21A	Q02753	160 aa	Known RBP	4.11	□□□□□ -1.75
TRS23	YDR246W	CUE4	Q04201	117 aa	Predicted RBP	4.11	□□□□□ -1.75
TRS23	YDR246W	LPP1	Q04396	274 aa		4.11	□□□□□ -1.75
TRS23	YDR246W	LIP2	Q06005	328 aa		4.11	□□□□□ -1.75
TRS23	YDR246W	RPL21B	Q12672	160 aa	Known RBP	4.11	□□□□□ -1.75
TRS23	YDR246W	IRA2	P19158	3079 aa		4.1	□□□□□ -1.75
TRS23	YDR246W	VPS63	O13549	108 aa		4.1	□□□□□ -1.75
TRS23	YDR246W	MRS3	P10566	314 aa		4.1	□□□□□ -1.75
TRS23	YDR246W	CPR5	P35176	225 aa		4.1	□□□□□ -1.75
TRS23	YDR246W	LSM4	P40070	187 aa	Known RBP	4.1	□□□□□ -1.75
TRS23	YDR246W	YJR015W	P47090	510 aa		4.1	□□□□□ -1.75
TRS23	YDR246W	YGR149W	P48236	432 aa		4.1	□□□□□ -1.75
TRS23	YDR246W	RPN14	P53196	417 aa		4.1	□□□□□ -1.75
TRS23	YDR246W	OCA2	P53949	197 aa		4.1	□□□□□ -1.75
TRS23	YDR246W	YHP1	Q04116	353 aa		4.1	□□□□□ -1.75
TRS23	YDR246W	API2	Q04413	109 aa		4.1	□□□□□ -1.75
TRS23	YDR246W	YTH1	Q06102	208 aa	Predicted RBP	4.1	□□□□□ -1.75
TRS23	YDR246W	NAT3	Q06504	195 aa		4.1	□□□□□ -1.75
TRS23	YDR246W	LOA1	Q06508	300 aa		4.1	□□□□□ -1.75
TRS23	YDR246W	YDL218W	Q07629	317 aa		4.1	□□□□□ -1.75
TRS23	YDR246W	GAT3	Q07928	141 aa		4.1	□□□□□ -1.75
TRS23	YDR246W	YOR029W	Q12243	111 aa		4.1	□□□□□ -1.75
TRS23	YDR246W	YPS3	Q12303	508 aa		4.1	□□□□□ -1.75
TRS23	YDR246W	YGL258W-A	Q3E740	77 aa		4.1	□□□□□ -1.75
TRS23	YDR246W	YOS1	Q3E834	85 aa		4.1	□□□□□ -1.75
TRS23	YDR246W	FMP49	A0A023PZB3	126 aa		4.09	□□□□□ -1.75
TRS23	YDR246W	RPL39	P04650	51 aa		4.09	□□□□□ -1.75
TRS23	YDR246W	RPL9A	P05738	191 aa	Known RBP	4.09	□□□□□ -1.75
TRS23	YDR246W	RPS22A	P0C0W1	130 aa	Known RBP	4.09	□□□□□ -1.75
TRS23	YDR246W	YGL010W	P25338	174 aa		4.09	□□□□□ -1.75
TRS23	YDR246W	NSA2	P40078	261 aa	Known RBP	4.09	□□□□□ -1.75
TRS23	YDR246W	GPI2	P46961	280 aa		4.09	□□□□□ -1.75
TRS23	YDR246W	BNA1	P47096	177 aa		4.09	□□□□□ -1.75
TRS23	YDR246W	DSK2	P48510	373 aa		4.09	□□□□□ -1.75
TRS23	YDR246W	YGL260W	P53056	76 aa		4.09	□□□□□ -1.75
TRS23	YDR246W	ERV14	P53173	138 aa		4.09	□□□□□ -1.75
TRS23	YDR246W	BOR1	P53838	576 aa		4.09	□□□□□ -1.75
TRS23	YDR246W	APS2	Q00381	147 aa		4.09	□□□□□ -1.75
TRS23	YDR246W	SHH3	Q04487	196 aa		4.09	□□□□□ -1.75
TRS23	YDR246W	LDS2	Q08218	356 aa		4.09	□□□□□ -1.75
TRS23	YDR246W	YMR316C-A	I2HB70	103 aa		4.08	□□□□□ -1.76
TRS23	YDR246W	HMX1	P32339	317 aa		4.08	□□□□□ -1.76
TRS23	YDR246W	SCM4	P32564	187 aa		4.08	□□□□□ -1.76
TRS23	YDR246W	SPS18	P32572	300 aa		4.08	□□□□□ -1.76
TRS23	YDR246W	YIL163C	P40448	117 aa		4.08	□□□□□ -1.76
TRS23	YDR246W	PIR5	P46999	287 aa		4.08	□□□□□ -1.76
TRS23	YDR246W	MIC27	P50945	234 aa		4.08	□□□□□ -1.76
TRS23	YDR246W	CRZ1	P53968	678 aa		4.08	□□□□□ -1.76
TRS23	YDR246W	ATC1	Q04005	294 aa		4.08	□□□□□ -1.76
TRS23	YDR246W	YMR317W	Q04893	1140 aa		4.08	□□□□□ -1.76
TRS23	YDR246W	YNR034W-A	Q3E841	98 aa		4.08	□□□□□ -1.76
TRS23	YDR246W	YIL134C-A	Q45U18	67 aa		4.08	□□□□□ -1.76
TRS23	YDR246W	YMR105W-A	Q8TGS8	64 aa		4.08	□□□□□ -1.76
TRS23	YDR246W	IRA1	P18963	3092 aa		4.08	□□□□□ -1.76
TRS23	YDR246W	POR1	P04840	283 aa	Known RBP	4.07	□□□□□ -1.76
TRS23	YDR246W	RPS23A	P0CX29	145 aa	Known RBP	4.07	□□□□□ -1.76
TRS23	YDR246W	RPS23B	P0CX30	145 aa		4.07	□□□□□ -1.76
TRS23	YDR246W	RNA15	P25299	296 aa	Predicted RBP	4.07	□□□□□ -1.76
TRS23	YDR246W	RPS2	P25443	254 aa	Known RBP	4.07	□□□□□ -1.76
TRS23	YDR246W	SRP21	P32342	167 aa		4.07	□□□□□ -1.76
TRS23	YDR246W	ACP1	P32463	125 aa		4.07	□□□□□ -1.76
TRS23	YDR246W	PHD1	P36093	366 aa		4.07	□□□□□ -1.76
TRS23	YDR246W	DAD2	P36162	133 aa		4.07	□□□□□ -1.76
TRS23	YDR246W	SRP14	P38985	146 aa		4.07	□□□□□ -1.76
TRS23	YDR246W	IRC22	P40006	225 aa		4.07	□□□□□ -1.76
TRS23	YDR246W	OST3	P48439	350 aa		4.07	□□□□□ -1.76
TRS23	YDR246W	RPL9B	P51401	191 aa	Known RBP	4.07	□□□□□ -1.76
TRS23	YDR246W	GEP5	Q12393	293 aa		4.07	□□□□□ -1.76
TRS23	YDR246W	DCN1	Q12395	269 aa		4.07	□□□□□ -1.76
TRS23	YDR246W	NOP1	P15646	327 aa	Known RBP	4.06	□□□□□ -1.76
TRS23	YDR246W	RPI1	P23250	407 aa	Known RBP	4.06	□□□□□ -1.76
TRS23	YDR246W	TOM40	P23644	387 aa	Known RBP	4.06	□□□□□ -1.76
TRS23	YDR246W	YBR090C	P38253	122 aa		4.06	□□□□□ -1.76
TRS23	YDR246W	YBR220C	P38318	560 aa		4.06	□□□□□ -1.76
TRS23	YDR246W	YHL037C	P38733	133 aa		4.06	□□□□□ -1.76
TRS23	YDR246W	CYB5	P40312	120 aa		4.06	□□□□□ -1.76
TRS23	YDR246W	YJL118W	P47022	219 aa		4.06	□□□□□ -1.76
TRS23	YDR246W	SED1	Q01589	338 aa		4.06	□□□□□ -1.76
TRS23	YDR246W	ARR2	Q06597	130 aa		4.06	□□□□□ -1.76
TRS23	YDR246W	PAA1	Q12447	191 aa	Known RBP	4.06	□□□□□ -1.76
TRS23	YDR246W	COA6	Q3E846	104 aa		4.06	□□□□□ -1.76
TRS23	YDR246W	PIS1	P06197	220 aa	Known RBP	4.05	□□□□□ -1.76
TRS23	YDR246W	ATP10	P18496	279 aa		4.05	□□□□□ -1.76
TRS23	YDR246W	MRPL44	P19956	98 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 40.7 ms