RNA–Protein interactions for RNA: YDR235W

PRP42, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP42, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP42YDR235W JAC1P53193 184 aa0□□□□□ -2.41
PRP42YDR235W NOC4Q06512 552 aaPredicted RBP0□□□□□ -2.41
PRP42YDR235W YDL241WQ07738 123 aa0□□□□□ -2.41
PRP42YDR235W HRD1Q08109 551 aa0□□□□□ -2.41
PRP42YDR235W GRE1Q08969 168 aa0□□□□□ -2.41
PRP42YDR235W YDL157CQ12082 118 aa0□□□□□ -2.41
PRP42YDR235W YOR214CQ12282 236 aa0□□□□□ -2.41
PRP42YDR235W MPD1Q12404 318 aaKnown RBP0□□□□□ -2.41
PRP42YDR235W YDL085C-AQ3E7B7 68 aaKnown RBP0□□□□□ -2.41
PRP42YDR235W ROM2P51862 1356 aaKnown RBP-0.01□□□□□ -2.41
PRP42YDR235W KIN28P06242 306 aa-0.01□□□□□ -2.41
PRP42YDR235W SEC14P24280 304 aaKnown RBP-0.01□□□□□ -2.41
PRP42YDR235W RFC2P40348 353 aa-0.01□□□□□ -2.41
PRP42YDR235W PAC10P48363 199 aa-0.01□□□□□ -2.41
PRP42YDR235W TIM13P53299 105 aa-0.01□□□□□ -2.41
PRP42YDR235W YNL122CP53921 115 aaPredicted RBP-0.01□□□□□ -2.41
PRP42YDR235W HSK3P69852 69 aa-0.01□□□□□ -2.41
PRP42YDR235W YPR114WQ06107 315 aa-0.01□□□□□ -2.41
PRP42YDR235W SHH4Q06236 168 aa-0.01□□□□□ -2.41
PRP42YDR235W BRX1Q08235 291 aaKnown RBP-0.01□□□□□ -2.41
PRP42YDR235W VAM10Q08474 114 aa-0.01□□□□□ -2.41
PRP42YDR235W HSL1P34244 1518 aa-0.01□□□□□ -2.41
PRP42YDR235W TAF2P23255 1407 aa-0.01□□□□□ -2.41
PRP42YDR235W LAA1P39526 2014 aa-0.01□□□□□ -2.41
PRP42YDR235W RAD9P14737 1309 aa-0.02□□□□□ -2.41
PRP42YDR235W UBR1P19812 1950 aa-0.02□□□□□ -2.41
PRP42YDR235W YBR056W-AI2HB52 66 aa-0.02□□□□□ -2.41
PRP42YDR235W RAD6P06104 172 aa-0.02□□□□□ -2.41
PRP42YDR235W YLR157W-EP0CF00 54 aa-0.02□□□□□ -2.41
PRP42YDR235W MRS4P23500 304 aa-0.02□□□□□ -2.41
PRP42YDR235W AHC2P25649 128 aa-0.02□□□□□ -2.41
PRP42YDR235W SPT14P32363 452 aa-0.02□□□□□ -2.41
PRP42YDR235W UBC6P33296 250 aaPredicted RBP-0.02□□□□□ -2.41
PRP42YDR235W YKL102CP34249 101 aa-0.02□□□□□ -2.41
PRP42YDR235W YKT6P36015 200 aaKnown RBP-0.02□□□□□ -2.41
PRP42YDR235W YBR027CP38220 110 aa-0.02□□□□□ -2.41
PRP42YDR235W AIM4P38305 123 aaPredicted RBP-0.02□□□□□ -2.41
PRP42YDR235W NVJ1P38881 321 aa-0.02□□□□□ -2.41
PRP42YDR235W YEL073CP39974 107 aa-0.02□□□□□ -2.41
PRP42YDR235W YGR269WP40326 108 aa-0.02□□□□□ -2.41
PRP42YDR235W FMP32P43557 207 aa-0.02□□□□□ -2.41
PRP42YDR235W TTI2P47168 421 aa-0.02□□□□□ -2.41
PRP42YDR235W CCC1P47818 322 aa-0.02□□□□□ -2.41
PRP42YDR235W GEP7P53171 287 aa-0.02□□□□□ -2.41
PRP42YDR235W NQM1P53228 333 aaPredicted RBP-0.02□□□□□ -2.41
PRP42YDR235W MGR2Q02889 113 aa-0.02□□□□□ -2.41
PRP42YDR235W YML079WQ03629 201 aa-0.02□□□□□ -2.41
PRP42YDR235W GPI17Q04080 534 aa-0.02□□□□□ -2.41
PRP42YDR235W GRX8Q05926 109 aa-0.02□□□□□ -2.41
PRP42YDR235W YLR307C-AQ3E825 87 aa-0.02□□□□□ -2.41
PRP42YDR235W TRM3Q07527 1436 aa-0.02□□□□□ -2.41
PRP42YDR235W RPS25BP0C0T4 108 aaKnown RBP-0.02□□□□□ -2.41
PRP42YDR235W RPS22AP0C0W1 130 aaKnown RBP-0.02□□□□□ -2.41
PRP42YDR235W RPL35AP0CX84 120 aaKnown RBP-0.02□□□□□ -2.41
PRP42YDR235W RPL35BP0CX85 120 aaKnown RBP-0.02□□□□□ -2.41
PRP42YDR235W HSP150P32478 413 aa-0.02□□□□□ -2.41
PRP42YDR235W PTC1P35182 281 aa-0.02□□□□□ -2.41
PRP42YDR235W TRS20P38334 175 aa-0.02□□□□□ -2.41
PRP42YDR235W YEL028WP39989 153 aa-0.02□□□□□ -2.41
PRP42YDR235W YMR141CP40211 102 aa-0.02□□□□□ -2.41
PRP42YDR235W CGR1P53188 120 aa-0.02□□□□□ -2.41
PRP42YDR235W ORM1P53224 222 aa-0.02□□□□□ -2.41
PRP42YDR235W SNO1Q03144 224 aa-0.02□□□□□ -2.41
PRP42YDR235W YDR102CQ03864 110 aa-0.02□□□□□ -2.41
PRP42YDR235W YOR072WQ08486 104 aa-0.02□□□□□ -2.41
PRP42YDR235W RPS25AQ3E792 108 aaPredicted RBP-0.02□□□□□ -2.41
PRP42YDR235W RPS22BQ3E7Y3 130 aaKnown RBP-0.02□□□□□ -2.41
PRP42YDR235W TY1B-HO13535 1793 aa-0.03□□□□□ -2.41
PRP42YDR235W COX5BP00425 151 aa-0.03□□□□□ -2.41
PRP42YDR235W SPS2P08459 502 aa-0.03□□□□□ -2.41
PRP42YDR235W RPL40AP0CH08 128 aaKnown RBP-0.03□□□□□ -2.41
PRP42YDR235W RPL40BP0CH09 128 aaKnown RBP-0.03□□□□□ -2.41
PRP42YDR235W SRP21P32342 167 aa-0.03□□□□□ -2.41
PRP42YDR235W SHG1P38337 142 aa-0.03□□□□□ -2.41
PRP42YDR235W YPT31P38555 223 aaKnown RBP-0.03□□□□□ -2.41
PRP42YDR235W YHR140WP38842 239 aa-0.03□□□□□ -2.41
PRP42YDR235W YEL014CP39999 101 aa-0.03□□□□□ -2.41
PRP42YDR235W MVB12P42939 101 aa-0.03□□□□□ -2.41
PRP42YDR235W HOP2P53187 214 aa-0.03□□□□□ -2.41
PRP42YDR235W YIP3P53633 176 aa-0.03□□□□□ -2.41
PRP42YDR235W THI74Q04083 370 aa-0.03□□□□□ -2.41
PRP42YDR235W SYM1Q06563 197 aa-0.03□□□□□ -2.41
PRP42YDR235W UIP4Q08926 304 aa-0.03□□□□□ -2.41
PRP42YDR235W HAP2P06774 265 aa-0.04□□□□□ -2.42
PRP42YDR235W DDR48P18899 430 aaKnown RBP-0.04□□□□□ -2.42
PRP42YDR235W RAD51P25454 400 aa-0.04□□□□□ -2.42
PRP42YDR235W AUA1P32450 94 aa-0.04□□□□□ -2.42
PRP42YDR235W FIG1P38224 298 aa-0.04□□□□□ -2.42
PRP42YDR235W FES1P38260 290 aa-0.04□□□□□ -2.42
PRP42YDR235W SLM6P38343 150 aa-0.04□□□□□ -2.42
PRP42YDR235W IPT1P38954 527 aa-0.04□□□□□ -2.42
PRP42YDR235W YER121WP40076 114 aa-0.04□□□□□ -2.42
PRP42YDR235W FIP1P45976 327 aa-0.04□□□□□ -2.42
PRP42YDR235W LIP1Q03579 150 aa-0.04□□□□□ -2.42
PRP42YDR235W FMN1Q03778 218 aa-0.04□□□□□ -2.42
PRP42YDR235W HPT1Q04178 221 aaKnown RBP-0.04□□□□□ -2.42
PRP42YDR235W IRC19Q07843 230 aa-0.04□□□□□ -2.42
PRP42YDR235W ATG10Q07879 167 aa-0.04□□□□□ -2.42
PRP42YDR235W YOR034C-AQ3E735 80 aa-0.04□□□□□ -2.42
PRP42YDR235W RPL33AP05744 107 aaKnown RBP-0.05□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms