RNA–Protein interactions for RNA: YDR190C

RVB1, Transcript of ATP-dependent DNA helicase, also known as pontin, yeast

Gene RVB1, Length 1,392 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RVB1	YDR190C	DER1	P38307	211 aa		3.92	□□□□□ -1.78
RVB1	YDR190C	YIL163C	P40448	117 aa		3.92	□□□□□ -1.78
RVB1	YDR190C	PAU5	P43575	122 aa		3.92	□□□□□ -1.78
RVB1	YDR190C	YJR015W	P47090	510 aa		3.92	□□□□□ -1.78
RVB1	YDR190C	CYT2	Q00873	224 aa		3.92	□□□□□ -1.78
RVB1	YDR190C	CUE4	Q04201	117 aa	Predicted RBP	3.92	□□□□□ -1.78
RVB1	YDR190C	SHH3	Q04487	196 aa		3.92	□□□□□ -1.78
RVB1	YDR190C	LIP2	Q06005	328 aa		3.92	□□□□□ -1.78
RVB1	YDR190C	YTH1	Q06102	208 aa	Predicted RBP	3.92	□□□□□ -1.78
RVB1	YDR190C	NAT3	Q06504	195 aa		3.92	□□□□□ -1.78
RVB1	YDR190C	SEN1	Q00416	2231 aa	Known RBP	3.92	□□□□□ -1.78
RVB1	YDR190C	FMP49	A0A023PZB3	126 aa		3.91	□□□□□ -1.78
RVB1	YDR190C	RPL39	P04650	51 aa		3.91	□□□□□ -1.78
RVB1	YDR190C	VMA16	P23968	213 aa		3.91	□□□□□ -1.78
RVB1	YDR190C	YGL010W	P25338	174 aa		3.91	□□□□□ -1.78
RVB1	YDR190C	PHD1	P36093	366 aa		3.91	□□□□□ -1.78
RVB1	YDR190C	HSP10	P38910	106 aa		3.91	□□□□□ -1.78
RVB1	YDR190C	LSM4	P40070	187 aa	Known RBP	3.91	□□□□□ -1.78
RVB1	YDR190C	NSA2	P40078	261 aa	Known RBP	3.91	□□□□□ -1.78
RVB1	YDR190C	YGR149W	P48236	432 aa		3.91	□□□□□ -1.78
RVB1	YDR190C	DSK2	P48510	373 aa		3.91	□□□□□ -1.78
RVB1	YDR190C	RPL21A	Q02753	160 aa	Known RBP	3.91	□□□□□ -1.78
RVB1	YDR190C	LPP1	Q04396	274 aa		3.91	□□□□□ -1.78
RVB1	YDR190C	LOA1	Q06508	300 aa		3.91	□□□□□ -1.78
RVB1	YDR190C	POS5	Q06892	414 aa		3.91	□□□□□ -1.78
RVB1	YDR190C	YOP1	Q12402	180 aa		3.91	□□□□□ -1.78
RVB1	YDR190C	RPL21B	Q12672	160 aa	Known RBP	3.91	□□□□□ -1.78
RVB1	YDR190C	VPS63	O13549	108 aa		3.9	□□□□□ -1.78
RVB1	YDR190C	YMR31	P19955	123 aa		3.9	□□□□□ -1.78
RVB1	YDR190C	YBR090C	P38253	122 aa		3.9	□□□□□ -1.78
RVB1	YDR190C	HUA1	P40325	198 aa		3.9	□□□□□ -1.78
RVB1	YDR190C	YFL051C	P43552	160 aa		3.9	□□□□□ -1.78
RVB1	YDR190C	PIR5	P46999	287 aa		3.9	□□□□□ -1.78
RVB1	YDR190C	ABM1	P47146	123 aa		3.9	□□□□□ -1.78
RVB1	YDR190C	ERV14	P53173	138 aa		3.9	□□□□□ -1.78
RVB1	YDR190C	YPL067C	Q02754	198 aa		3.9	□□□□□ -1.78
RVB1	YDR190C	YHP1	Q04116	353 aa		3.9	□□□□□ -1.78
RVB1	YDR190C	GAT3	Q07928	141 aa		3.9	□□□□□ -1.78
RVB1	YDR190C	YOR029W	Q12243	111 aa		3.9	□□□□□ -1.78
RVB1	YDR190C	GEP5	Q12393	293 aa		3.9	□□□□□ -1.78
RVB1	YDR190C	YGL258W-A	Q3E740	77 aa		3.9	□□□□□ -1.78
RVB1	YDR190C	YNR034W-A	Q3E841	98 aa		3.9	□□□□□ -1.78
RVB1	YDR190C	YIL134C-A	Q45U18	67 aa		3.9	□□□□□ -1.78
RVB1	YDR190C	YMR105W-A	Q8TGS8	64 aa		3.9	□□□□□ -1.78
RVB1	YDR190C	POR1	P04840	283 aa	Known RBP	3.89	□□□□□ -1.79
RVB1	YDR190C	RPS2	P25443	254 aa	Known RBP	3.89	□□□□□ -1.79
RVB1	YDR190C	SCM4	P32564	187 aa		3.89	□□□□□ -1.79
RVB1	YDR190C	CMC1	P36064	111 aa		3.89	□□□□□ -1.79
RVB1	YDR190C	CTR2	P38865	189 aa		3.89	□□□□□ -1.79
RVB1	YDR190C	SUR2	P38992	349 aa		3.89	□□□□□ -1.79
RVB1	YDR190C	UIP3	P39547	235 aa		3.89	□□□□□ -1.79
RVB1	YDR190C	IRC22	P40006	225 aa		3.89	□□□□□ -1.79
RVB1	YDR190C	YER085C	P40058	173 aa		3.89	□□□□□ -1.79
RVB1	YDR190C	BOR1	P53838	576 aa		3.89	□□□□□ -1.79
RVB1	YDR190C	API2	Q04413	109 aa		3.89	□□□□□ -1.79
RVB1	YDR190C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.89	□□□□□ -1.79	not detected
RVB1	YDR190C	YPS3	Q12303	508 aa		3.89	□□□□□ -1.79
RVB1	YDR190C	DCN1	Q12395	269 aa		3.89	□□□□□ -1.79
RVB1	YDR190C	RPL9A	P05738	191 aa	Known RBP	3.89	□□□□□ -1.79
RVB1	YDR190C	RPS22A	P0C0W1	130 aa	Known RBP	3.89	□□□□□ -1.79
RVB1	YDR190C	NOP1	P15646	327 aa	Known RBP	3.89	□□□□□ -1.79
RVB1	YDR190C	FUN14	P18411	198 aa		3.89	□□□□□ -1.79
RVB1	YDR190C	RNA15	P25299	296 aa	Predicted RBP	3.89	□□□□□ -1.79
RVB1	YDR190C	CPR5	P35176	225 aa		3.89	□□□□□ -1.79
RVB1	YDR190C	YKL070W	P36087	169 aa		3.89	□□□□□ -1.79
RVB1	YDR190C	OST3	P48439	350 aa		3.89	□□□□□ -1.79
RVB1	YDR190C	MIC27	P50945	234 aa		3.89	□□□□□ -1.79
RVB1	YDR190C	OCA2	P53949	197 aa		3.89	□□□□□ -1.79
RVB1	YDR190C	CRZ1	P53968	678 aa		3.89	□□□□□ -1.79
RVB1	YDR190C	APS2	Q00381	147 aa		3.89	□□□□□ -1.79
RVB1	YDR190C	MRPL44	P19956	98 aa		3.88	□□□□□ -1.79
RVB1	YDR190C	PAM17	P36147	197 aa		3.88	□□□□□ -1.79
RVB1	YDR190C	MRPL11	P36521	249 aa	Predicted RBP	3.88	□□□□□ -1.79
RVB1	YDR190C	POP7	P38291	140 aa		3.88	□□□□□ -1.79
RVB1	YDR190C	YBR220C	P38318	560 aa		3.88	□□□□□ -1.79
RVB1	YDR190C	GPI2	P46961	280 aa		3.88	□□□□□ -1.79
RVB1	YDR190C	RPL9B	P51401	191 aa	Known RBP	3.88	□□□□□ -1.79
RVB1	YDR190C	GIM5	Q04493	163 aa		3.88	□□□□□ -1.79
RVB1	YDR190C	PAA1	Q12447	191 aa	Known RBP	3.88	□□□□□ -1.79
RVB1	YDR190C	ILV5	P06168	395 aa	Known RBP	3.87	□□□□□ -1.79
RVB1	YDR190C	AQY1	P0CD91	305 aa		3.87	□□□□□ -1.79
RVB1	YDR190C	ATP10	P18496	279 aa		3.87	□□□□□ -1.79
RVB1	YDR190C	TOM40	P23644	387 aa	Known RBP	3.87	□□□□□ -1.79
RVB1	YDR190C	SRP14	P38985	146 aa		3.87	□□□□□ -1.79
RVB1	YDR190C	CYB5	P40312	120 aa		3.87	□□□□□ -1.79
RVB1	YDR190C	YGL260W	P53056	76 aa		3.87	□□□□□ -1.79
RVB1	YDR190C	SMT3	Q12306	101 aa	Known RBP	3.87	□□□□□ -1.79
RVB1	YDR190C	TRA1	P38811	3744 aa		3.87	□□□□□ -1.79
RVB1	YDR190C	HTB1	P02293	131 aa	Known RBP	3.86	□□□□□ -1.79
RVB1	YDR190C	PIS1	P06197	220 aa	Known RBP	3.86	□□□□□ -1.79
RVB1	YDR190C	SUA7	P29055	345 aa	Predicted RBP	3.86	□□□□□ -1.79
RVB1	YDR190C	SRP21	P32342	167 aa		3.86	□□□□□ -1.79
RVB1	YDR190C	SPS18	P32572	300 aa		3.86	□□□□□ -1.79
RVB1	YDR190C	RAD23	P32628	398 aa	Known RBP	3.86	□□□□□ -1.79
RVB1	YDR190C	YGP1	P38616	354 aa	Known RBP	3.86	□□□□□ -1.79
RVB1	YDR190C	CPD1	P53314	239 aa		3.86	□□□□□ -1.79
RVB1	YDR190C	SED1	Q01589	338 aa		3.86	□□□□□ -1.79
RVB1	YDR190C	YMR166C	Q03829	368 aa		3.86	□□□□□ -1.79
RVB1	YDR190C	YOR105W	Q08504	108 aa		3.86	□□□□□ -1.79
RVB1	YDR190C	YCL001W-B	Q96VH2	84 aa		3.86	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 67.7 ms