RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeastyeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPO21YDL140C RPL42BP0CX28 106 aaKnown RBP3.19□□□□□ -1.9
RPO21YDL140C YER084WP40057 128 aa3.19□□□□□ -1.9
RPO21YDL140C RDL1Q12305 139 aaKnown RBP3.19□□□□□ -1.9
RPO21YDL140C APC1P53886 1748 aa3.19□□□□□ -1.9
RPO21YDL140C PRP8P33334 2413 aaKnown RBP3.19□□□□□ -1.9
RPO21YDL140C RNQ1P25367 405 aa3.19□□□□□ -1.9
RPO21YDL140C FHN1P53279 174 aa3.19□□□□□ -1.9
RPO21YDL140C YCL001W-BQ96VH2 84 aa3.19□□□□□ -1.9
RPO21YDL140C SPO13P23624 291 aa3.19□□□□□ -1.9
RPO21YDL140C ERV1P27882 189 aa3.19□□□□□ -1.9
RPO21YDL140C OCH1P31755 480 aa3.19□□□□□ -1.9
RPO21YDL140C MMS2P53152 137 aa3.19□□□□□ -1.9
RPO21YDL140C ASM4Q05166 528 aa3.19□□□□□ -1.9
RPO21YDL140C TOR1P35169 2470 aa3.19□□□□□ -1.9
RPO21YDL140C YAR029WP39549 74 aa3.19□□□□□ -1.9
RPO21YDL140C MCH4Q08268 501 aa3.19□□□□□ -1.9
RPO21YDL140C TY1B-JR2P47100 1755 aaKnown RBP3.19□□□□□ -1.9
RPO21YDL140C TY1B-ER2Q03619 1755 aa3.19□□□□□ -1.9
RPO21YDL140C TY1B-MR1Q04214 1755 aa3.19□□□□□ -1.9
RPO21YDL140C TY1B-MR2Q04670 1755 aaKnown RBP3.19□□□□□ -1.9
RPO21YDL140C TY1B-LR1Q12088 1755 aaKnown RBP3.19□□□□□ -1.9
RPO21YDL140C TY1B-NL1Q12112 1755 aa3.19□□□□□ -1.9
RPO21YDL140C TY1B-GR1Q12141 1755 aa3.19□□□□□ -1.9
RPO21YDL140C TY1B-BLQ12490 1755 aa3.19□□□□□ -1.9
RPO21YDL140C HFA1P32874 2273 aa3.19□□□□□ -1.9
RPO21YDL140C YMR31P19955 123 aa3.18□□□□□ -1.9
RPO21YDL140C MRPL11P36521 249 aaPredicted RBP3.18□□□□□ -1.9
RPO21YDL140C SLM4P38247 162 aa3.18□□□□□ -1.9
RPO21YDL140C PEX22P39718 180 aa3.18□□□□□ -1.9
RPO21YDL140C VTC1P40046 129 aaRIP-Chip data3.18□□□□□ -1.9not detected
RPO21YDL140C CCS1P40202 249 aaKnown RBP3.18□□□□□ -1.9
RPO21YDL140C IZH1Q03419 316 aa3.18□□□□□ -1.9
RPO21YDL140C YNL200CP40165 246 aaKnown RBP3.18□□□□□ -1.9
RPO21YDL140C RPA43P46669 326 aa3.18□□□□□ -1.9
RPO21YDL140C TY1A-DR2Q03964 440 aaKnown RBP3.18□□□□□ -1.9
RPO21YDL140C KSH1Q8TGJ3 72 aa3.18□□□□□ -1.9
RPO21YDL140C PUT1P09368 476 aa3.18□□□□□ -1.9
RPO21YDL140C CPT1P17898 393 aa3.18□□□□□ -1.9
RPO21YDL140C CDC43P18898 376 aa3.18□□□□□ -1.9
RPO21YDL140C RPL16BP26785 198 aaKnown RBP3.18□□□□□ -1.9
RPO21YDL140C AIM29P36154 155 aa3.18□□□□□ -1.9
RPO21YDL140C YEA6P39953 335 aa3.18□□□□□ -1.9
RPO21YDL140C CIN5P40917 295 aa3.18□□□□□ -1.9
RPO21YDL140C UBP8P50102 471 aa3.18□□□□□ -1.9
RPO21YDL140C YGL149WP53116 101 aa3.18□□□□□ -1.9
RPO21YDL140C YLR126CQ12288 251 aa3.18□□□□□ -1.9
RPO21YDL140C ATP5P09457 212 aa3.18□□□□□ -1.9
RPO21YDL140C YLR156WP0CE96 114 aa3.18□□□□□ -1.9
RPO21YDL140C YLR159WP0CE97 114 aa3.18□□□□□ -1.9
RPO21YDL140C YLR161WP0CE98 114 aa3.18□□□□□ -1.9
RPO21YDL140C YLR157W-DP0CE99 70 aa3.18□□□□□ -1.9
RPO21YDL140C MATALPHA1P0CY06 175 aa3.18□□□□□ -1.9
RPO21YDL140C HMLALPHA1P0CY07 175 aa3.18□□□□□ -1.9
RPO21YDL140C MDM10P18409 493 aa3.18□□□□□ -1.9
RPO21YDL140C PAU3P25610 124 aa3.18□□□□□ -1.9
RPO21YDL140C HSP10P38910 106 aa3.18□□□□□ -1.9
RPO21YDL140C YJR015WP47090 510 aa3.18□□□□□ -1.9
RPO21YDL140C SOK2P53438 785 aaPredicted RBP3.18□□□□□ -1.9
RPO21YDL140C MRP2P10663 115 aaPredicted RBP3.17□□□□□ -1.9
RPO21YDL140C YCR041WP37265 110 aa3.17□□□□□ -1.9
RPO21YDL140C PRY1P47032 299 aa3.17□□□□□ -1.9
RPO21YDL140C DOC1P53068 250 aa3.17□□□□□ -1.9
RPO21YDL140C YGL034CP53186 121 aa3.17□□□□□ -1.9
RPO21YDL140C YDR274CP87283 123 aa3.17□□□□□ -1.9
RPO21YDL140C COX12Q01519 83 aa3.17□□□□□ -1.9
RPO21YDL140C FKS3Q04952 1785 aa3.17□□□□□ -1.9
RPO21YDL140C REC114P32841 428 aa3.17□□□□□ -1.9
RPO21YDL140C SWT21P53873 357 aaPredicted RBP3.17□□□□□ -1.9
RPO21YDL140C DAD4P69851 72 aa3.17□□□□□ -1.9
RPO21YDL140C ADH2P00331 348 aaKnown RBP3.17□□□□□ -1.9
RPO21YDL140C POP8P38208 133 aa3.17□□□□□ -1.9
RPO21YDL140C CWP2P43497 92 aa3.17□□□□□ -1.9
RPO21YDL140C UBC12P52491 188 aa3.17□□□□□ -1.9
RPO21YDL140C YOR343CQ12484 108 aa3.17□□□□□ -1.9
RPO21YDL140C HTB2P02294 131 aa3.17□□□□□ -1.9
RPO21YDL140C ROX3P25046 220 aa3.17□□□□□ -1.9
RPO21YDL140C YKL069WP36088 180 aa3.17□□□□□ -1.9
RPO21YDL140C MRPS9P38120 278 aa3.17□□□□□ -1.9
RPO21YDL140C MIG3P39943 394 aa3.17□□□□□ -1.9
RPO21YDL140C KNH1P50112 268 aa3.17□□□□□ -1.9
RPO21YDL140C DIG1Q03063 452 aaKnown RBP3.17□□□□□ -1.9
RPO21YDL140C BRR2P32639 2163 aaKnown RBP3.17□□□□□ -1.9
RPO21YDL140C PAU19P0CE85 124 aa3.16□□□□□ -1.9
RPO21YDL140C PAU16P35994 123 aa3.16□□□□□ -1.9
RPO21YDL140C YPT10P38146 199 aa3.16□□□□□ -1.9
RPO21YDL140C PAU15P40585 124 aa3.16□□□□□ -1.9
RPO21YDL140C MIC26P50087 233 aa3.16□□□□□ -1.9
RPO21YDL140C ATG33Q06485 197 aa3.16□□□□□ -1.9
RPO21YDL140C PAU17Q12370 124 aa3.16□□□□□ -1.9
RPO21YDL140C CPR5P35176 225 aa3.16□□□□□ -1.9
RPO21YDL140C RPL14AP36105 138 aaKnown RBP3.16□□□□□ -1.9
RPO21YDL140C RPL14BP38754 138 aaKnown RBP3.16□□□□□ -1.9
RPO21YDL140C YHR140WP38842 239 aa3.16□□□□□ -1.9
RPO21YDL140C YBR182C-AQ8TGU6 64 aa3.16□□□□□ -1.9
RPO21YDL140C DDR48P18899 430 aaKnown RBP3.16□□□□□ -1.9
RPO21YDL140C SCM4P32564 187 aa3.16□□□□□ -1.9
RPO21YDL140C YPL261CQ08976 102 aa3.16□□□□□ -1.9
RPO21YDL140C AIM3P38266 947 aaKnown RBP3.16□□□□□ -1.9
RPO21YDL140C SDH8P38345 138 aa3.16□□□□□ -1.9
RPO21YDL140C YIL012WP40551 113 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 73.8 ms