RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W TY1B-ER1Q03612 1755 aa3.7□□□□□ -1.82
KIN28YDL108W TY1B-ML1Q04711 1755 aaKnown RBP3.7□□□□□ -1.82
KIN28YDL108W TY1B-GR2Q12269 1755 aa3.7□□□□□ -1.82
KIN28YDL108W TY1B-OLQ12273 1755 aa3.7□□□□□ -1.82
KIN28YDL108W TY1B-PLQ12414 1755 aaKnown RBP3.7□□□□□ -1.82
KIN28YDL108W RPL9AP05738 191 aaKnown RBP3.69□□□□□ -1.82
KIN28YDL108W EMP24P32803 203 aaKnown RBP3.69□□□□□ -1.82
KIN28YDL108W CLB6P32943 380 aa3.69□□□□□ -1.82
KIN28YDL108W SHE1P38200 338 aa3.69□□□□□ -1.82
KIN28YDL108W NSG1P38837 291 aa3.69□□□□□ -1.82
KIN28YDL108W YER188WP40103 239 aa3.69□□□□□ -1.82
KIN28YDL108W YIR035CP40579 254 aa3.69□□□□□ -1.82
KIN28YDL108W SYS1P41544 203 aa3.69□□□□□ -1.82
KIN28YDL108W RPL9BP51401 191 aaKnown RBP3.69□□□□□ -1.82
KIN28YDL108W EST3Q03096 181 aa3.69□□□□□ -1.82
KIN28YDL108W YMR181CQ03231 154 aa3.69□□□□□ -1.82
KIN28YDL108W YOL014WQ08110 124 aa3.69□□□□□ -1.82
KIN28YDL108W MIM1Q08176 113 aa3.69□□□□□ -1.82
KIN28YDL108W YPR011CQ12251 326 aa3.69□□□□□ -1.82
KIN28YDL108W PST1Q12355 444 aa3.69□□□□□ -1.82
KIN28YDL108W YML100W-AQ8TGT0 57 aa3.69□□□□□ -1.82
KIN28YDL108W YCF1P39109 1515 aaKnown RBP3.69□□□□□ -1.82
KIN28YDL108W TY1B-GR3Q12316 1755 aa3.68□□□□□ -1.82
KIN28YDL108W TY1B-ORQ92393 1755 aa3.68□□□□□ -1.82
KIN28YDL108W SCC2Q04002 1493 aa3.68□□□□□ -1.82
KIN28YDL108W YPR170W-BP0C5R9 85 aa3.68□□□□□ -1.82
KIN28YDL108W LDS1P31379 325 aa3.68□□□□□ -1.82
KIN28YDL108W FMT1P32785 401 aa3.68□□□□□ -1.82
KIN28YDL108W OM14P38325 134 aa3.68□□□□□ -1.82
KIN28YDL108W PHO89P38361 574 aa3.68□□□□□ -1.82
KIN28YDL108W HTD2P38790 280 aaKnown RBP3.68□□□□□ -1.82
KIN28YDL108W KRE9P39005 276 aa3.68□□□□□ -1.82
KIN28YDL108W YFL067WP43537 175 aa3.68□□□□□ -1.82
KIN28YDL108W YGR026WP53217 278 aa3.68□□□□□ -1.82
KIN28YDL108W LPP1Q04396 274 aa3.68□□□□□ -1.82
KIN28YDL108W DDP1Q99321 188 aaKnown RBP3.68□□□□□ -1.82
KIN28YDL108W MON2P48563 1636 aaPredicted RBP3.68□□□□□ -1.82
KIN28YDL108W TY2B-LR1P0C2J3 1770 aa3.68□□□□□ -1.82
KIN28YDL108W TY2B-FP0CX63 1770 aa3.68□□□□□ -1.82
KIN28YDL108W TY2B-GR2P0CX64 1770 aa3.68□□□□□ -1.82
KIN28YDL108W TY2B-CP25384 1770 aa3.68□□□□□ -1.82
KIN28YDL108W TY2B-DR2Q03494 1770 aa3.68□□□□□ -1.82
KIN28YDL108W TY2B-DR3Q07791 1770 aaKnown RBP3.68□□□□□ -1.82
KIN28YDL108W TY2B-OR1Q12113 1770 aa3.68□□□□□ -1.82
KIN28YDL108W TY2B-DR1Q12472 1770 aa3.68□□□□□ -1.82
KIN28YDL108W TY2B-BQ12491 1770 aa3.68□□□□□ -1.82
KIN28YDL108W TY2B-OR2Q12501 1770 aa3.68□□□□□ -1.82
KIN28YDL108W VPS15P22219 1454 aa3.67□□□□□ -1.82
KIN28YDL108W COX5BP00425 151 aa3.67□□□□□ -1.82
KIN28YDL108W HSP12P22943 109 aaKnown RBP3.67□□□□□ -1.82
KIN28YDL108W YCR025CP25352 136 aa3.67□□□□□ -1.82
KIN28YDL108W IRC22P40006 225 aa3.67□□□□□ -1.82
KIN28YDL108W MPM1P40364 252 aa3.67□□□□□ -1.82
KIN28YDL108W CUP9P41817 306 aa3.67□□□□□ -1.82
KIN28YDL108W SMD1Q02260 146 aaPredicted RBP3.67□□□□□ -1.82
KIN28YDL108W YMR082CQ04276 118 aa3.67□□□□□ -1.82
KIN28YDL108W YMR090WQ04304 227 aaKnown RBP3.67□□□□□ -1.82
KIN28YDL108W FSH2Q05015 223 aa3.67□□□□□ -1.82
KIN28YDL108W TIR4Q12218 487 aaPredicted RBP3.67□□□□□ -1.82
KIN28YDL108W SWR1Q05471 1514 aa3.66□□□□□ -1.82
KIN28YDL108W HHF1P02309 103 aaKnown RBP3.66□□□□□ -1.82
KIN28YDL108W YCR099CP25657 155 aa3.66□□□□□ -1.82
KIN28YDL108W PAM17P36147 197 aa3.66□□□□□ -1.82
KIN28YDL108W YBR013CP38215 129 aa3.66□□□□□ -1.82
KIN28YDL108W YAR029WP39549 74 aa3.66□□□□□ -1.82
KIN28YDL108W PAM16P42949 149 aa3.66□□□□□ -1.82
KIN28YDL108W SKI6P46948 246 aaPredicted RBP3.66□□□□□ -1.82
KIN28YDL108W DAN1P47178 298 aa3.66□□□□□ -1.82
KIN28YDL108W ADD37Q03233 198 aa3.66□□□□□ -1.82
KIN28YDL108W GAL83Q04739 417 aa3.66□□□□□ -1.82
KIN28YDL108W YCL021W-AQ96VH3 125 aa3.66□□□□□ -1.82
KIN28YDL108W FAS2P19097 1887 aaKnown RBP3.66□□□□□ -1.82
KIN28YDL108W RPB3P16370 318 aaKnown RBP3.65□□□□□ -1.83
KIN28YDL108W BET1P22804 142 aa3.65□□□□□ -1.83
KIN28YDL108W YRA2P36036 203 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
KIN28YDL108W UTP30P36144 274 aaKnown RBP3.65□□□□□ -1.83
KIN28YDL108W SPG1P50088 95 aa3.65□□□□□ -1.83
KIN28YDL108W SDS23P53172 527 aa3.65□□□□□ -1.83
KIN28YDL108W YPL039WQ03080 316 aa3.65□□□□□ -1.83
KIN28YDL108W YHC1Q05900 231 aaKnown RBP3.65□□□□□ -1.83
KIN28YDL108W FIT3Q08907 204 aa3.65□□□□□ -1.83
KIN28YDL108W YOR020W-AQ3E824 90 aa3.65□□□□□ -1.83
KIN28YDL108W DNA2P38859 1522 aa3.65□□□□□ -1.83
KIN28YDL108W YFR010W-AP0C5N0 62 aa3.64□□□□□ -1.83
KIN28YDL108W CCS1P40202 249 aaKnown RBP3.64□□□□□ -1.83
KIN28YDL108W TIR3P40552 269 aa3.64□□□□□ -1.83
KIN28YDL108W MPC1P53157 130 aaKnown RBP3.64□□□□□ -1.83
KIN28YDL108W YMR252CQ04814 134 aa3.64□□□□□ -1.83
KIN28YDL108W GPI11Q06636 219 aa3.64□□□□□ -1.83
KIN28YDL108W FEX2Q08991 375 aa3.64□□□□□ -1.83
KIN28YDL108W JID1Q12350 301 aa3.64□□□□□ -1.83
KIN28YDL108W KSH1Q8TGJ3 72 aa3.64□□□□□ -1.83
KIN28YDL108W MED11Q99278 115 aa3.64□□□□□ -1.83
KIN28YDL108W HAP1P0CE41 1502 aa3.64□□□□□ -1.83
KIN28YDL108W AUS1Q08409 1394 aa3.63□□□□□ -1.83
KIN28YDL108W SRB8P25648 1427 aa3.63□□□□□ -1.83
KIN28YDL108W YRF1-2P40105 1681 aa3.63□□□□□ -1.83
KIN28YDL108W TY3B-IQ7LHG5 1498 aaKnown RBP3.63□□□□□ -1.83
KIN28YDL108W MSW1P04803 379 aa3.63□□□□□ -1.83
KIN28YDL108W ADH3P07246 375 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms