RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCL020WYCL020W NQM1P53228 333 aaPredicted RBP0.68□□□□□ -2.3
YCL020WYCL020W THI74Q04083 370 aa0.68□□□□□ -2.3
YCL020WYCL020W PEX11Q12462 236 aa0.68□□□□□ -2.3
YCL020WYCL020W YMR030W-AQ3E760 96 aa0.68□□□□□ -2.3
YCL020WYCL020W SAC3P46674 1301 aa0.68□□□□□ -2.3
YCL020WYCL020W CMD1P06787 147 aaKnown RBP0.67□□□□□ -2.3
YCL020WYCL020W VPS51P36116 164 aa0.67□□□□□ -2.3
YCL020WYCL020W GLR1P41921 483 aaKnown RBP0.67□□□□□ -2.3
YCL020WYCL020W VPS28Q02767 242 aa0.67□□□□□ -2.3
YCL020WYCL020W GRX5Q02784 150 aa0.67□□□□□ -2.3
YCL020WYCL020W RIF1P29539 1916 aa0.67□□□□□ -2.3
YCL020WYCL020W RAD6P06104 172 aa0.66□□□□□ -2.3
YCL020WYCL020W AHT1P29589 182 aa0.66□□□□□ -2.3
YCL020WYCL020W FES1P38260 290 aa0.66□□□□□ -2.3
YCL020WYCL020W YEL028WP39989 153 aa0.66□□□□□ -2.3
YCL020WYCL020W YGL230CP53074 147 aa0.66□□□□□ -2.3
YCL020WYCL020W TIM13P53299 105 aa0.66□□□□□ -2.3
YCL020WYCL020W YDR102CQ03864 110 aa0.66□□□□□ -2.3
YCL020WYCL020W PLP1Q04004 230 aa0.66□□□□□ -2.3
YCL020WYCL020W SYM1Q06563 197 aa0.66□□□□□ -2.3
YCL020WYCL020W CMC2Q3E7A4 109 aa0.66□□□□□ -2.3
YCL020WYCL020W SPS2P08459 502 aa0.65□□□□□ -2.3
YCL020WYCL020W GLC8P41818 229 aa0.65□□□□□ -2.3
YCL020WYCL020W YPR114WQ06107 315 aa0.65□□□□□ -2.3
YCL020WYCL020W ATG10Q07879 167 aa0.65□□□□□ -2.3
YCL020WYCL020W RDI1Q12434 202 aa0.65□□□□□ -2.3
YCL020WYCL020W INO4P13902 151 aa0.64□□□□□ -2.31
YCL020WYCL020W SHB17P36136 271 aaKnown RBP0.64□□□□□ -2.31
YCL020WYCL020W YKR070WP36151 352 aaKnown RBP0.64□□□□□ -2.31
YCL020WYCL020W YPT31P38555 223 aaKnown RBP0.64□□□□□ -2.31
YCL020WYCL020W SBH2P52871 88 aa0.64□□□□□ -2.31
YCL020WYCL020W ORM1P53224 222 aa0.64□□□□□ -2.31
YCL020WYCL020W TMA20P89886 181 aaPredicted RBP0.64□□□□□ -2.31
YCL020WYCL020W LIP1Q03579 150 aa0.64□□□□□ -2.31
YCL020WYCL020W YML079WQ03629 201 aa0.64□□□□□ -2.31
YCL020WYCL020W FIT1Q04433 528 aa0.64□□□□□ -2.31
YCL020WYCL020W AVO2Q04749 426 aa0.64□□□□□ -2.31
YCL020WYCL020W YLR053CQ12026 108 aa0.64□□□□□ -2.31
YCL020WYCL020W PRP8P33334 2413 aaKnown RBP0.64□□□□□ -2.31
YCL020WYCL020W TRM3Q07527 1436 aa0.64□□□□□ -2.31
YCL020WYCL020W HFA1P32874 2273 aa0.64□□□□□ -2.31
YCL020WYCL020W ATP5P09457 212 aa0.64□□□□□ -2.31
YCL020WYCL020W RPS25BP0C0T4 108 aaKnown RBP0.64□□□□□ -2.31
YCL020WYCL020W YGR269WP40326 108 aa0.64□□□□□ -2.31
YCL020WYCL020W DLS1P40366 167 aa0.64□□□□□ -2.31
YCL020WYCL020W MOB1P40484 314 aa0.64□□□□□ -2.31
YCL020WYCL020W DCV1P43595 202 aa0.64□□□□□ -2.31
YCL020WYCL020W YGL101WP53144 215 aa0.64□□□□□ -2.31
YCL020WYCL020W LSM3P57743 89 aaKnown RBP0.64□□□□□ -2.31
YCL020WYCL020W YDL241WQ07738 123 aa0.64□□□□□ -2.31
YCL020WYCL020W CCW12Q12127 133 aa0.64□□□□□ -2.31
YCL020WYCL020W NSL1Q12143 216 aa0.64□□□□□ -2.31
YCL020WYCL020W RPS25AQ3E792 108 aaPredicted RBP0.64□□□□□ -2.31
YCL020WYCL020W UBI4P0CG63 381 aaKnown RBP0.63□□□□□ -2.31
YCL020WYCL020W UGX2P32772 223 aa0.63□□□□□ -2.31
YCL020WYCL020W PTC1P35182 281 aa0.63□□□□□ -2.31
YCL020WYCL020W SRP102P36057 244 aaPredicted RBP0.63□□□□□ -2.31
YCL020WYCL020W APS3P47064 194 aa0.63□□□□□ -2.31
YCL020WYCL020W TLG1Q03322 224 aa0.63□□□□□ -2.31
YCL020WYCL020W YDL157CQ12082 118 aa0.63□□□□□ -2.31
YCL020WYCL020W YLR046CQ12253 270 aa0.63□□□□□ -2.31
YCL020WYCL020W EFG1Q3E705 233 aaKnown RBP0.63□□□□□ -2.31
YCL020WYCL020W KIN28P06242 306 aa0.62□□□□□ -2.31
YCL020WYCL020W MRS4P23500 304 aa0.62□□□□□ -2.31
YCL020WYCL020W SPT14P32363 452 aa0.62□□□□□ -2.31
YCL020WYCL020W SLM6P38343 150 aa0.62□□□□□ -2.31
YCL020WYCL020W FIP1P45976 327 aa0.62□□□□□ -2.31
YCL020WYCL020W YJR015WP47090 510 aa0.62□□□□□ -2.31
YCL020WYCL020W YNR064CP53750 290 aa0.62□□□□□ -2.31
YCL020WYCL020W HHT1P61830 136 aa0.62□□□□□ -2.31
YCL020WYCL020W YDC1Q02896 317 aa0.62□□□□□ -2.31
YCL020WYCL020W KEI1Q06346 221 aa0.62□□□□□ -2.31
YCL020WYCL020W CMC4Q3E7A9 73 aa0.62□□□□□ -2.31
YCL020WYCL020W QCR2P07257 368 aa0.61□□□□□ -2.31
YCL020WYCL020W RPL30P14120 105 aaKnown RBP0.61□□□□□ -2.31
YCL020WYCL020W SRP21P32342 167 aa0.61□□□□□ -2.31
YCL020WYCL020W AME1P38313 324 aa0.61□□□□□ -2.31
YCL020WYCL020W HTD2P38790 280 aaKnown RBP0.61□□□□□ -2.31
YCL020WYCL020W APQ12P40532 138 aa0.61□□□□□ -2.31
YCL020WYCL020W CCC1P47818 322 aa0.61□□□□□ -2.31
YCL020WYCL020W SMD2Q06217 110 aaKnown RBP0.61□□□□□ -2.31
YCL020WYCL020W UIP4Q08926 304 aa0.61□□□□□ -2.31
YCL020WYCL020W RME1P32338 300 aaKnown RBP0.6□□□□□ -2.31
YCL020WYCL020W UBC6P33296 250 aaPredicted RBP0.6□□□□□ -2.31
YCL020WYCL020W ATG8P38182 117 aaRIP-Chip data0.6□□□□□ -2.31not detected
YCL020WYCL020W YER181CP40097 107 aa0.6□□□□□ -2.31
YCL020WYCL020W MAK3Q03503 176 aa0.6□□□□□ -2.31
YCL020WYCL020W TMA23Q03525 211 aa0.6□□□□□ -2.31
YCL020WYCL020W HRD1Q08109 551 aa0.6□□□□□ -2.31
YCL020WYCL020W YPR202WQ08993 238 aa0.6□□□□□ -2.31
YCL020WYCL020W RIB3Q99258 208 aa0.6□□□□□ -2.31
YCL020WYCL020W DDR48P18899 430 aaKnown RBP0.59□□□□□ -2.32
YCL020WYCL020W PRE1P22141 198 aaKnown RBP0.59□□□□□ -2.32
YCL020WYCL020W MRPL24P36525 258 aaPredicted RBP0.59□□□□□ -2.32
YCL020WYCL020W DER1P38307 211 aa0.59□□□□□ -2.32
YCL020WYCL020W YAR064WP39563 99 aa0.59□□□□□ -2.32
YCL020WYCL020W YIL102CP40488 101 aa0.59□□□□□ -2.32
YCL020WYCL020W CIN5P40917 295 aa0.59□□□□□ -2.32
YCL020WYCL020W GEP7P53171 287 aa0.59□□□□□ -2.32
YCL020WYCL020W NMA1Q06178 401 aaKnown RBP0.59□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 81.5 ms