RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C QCR6P00127 147 aa1.71□□□□□ -2.14
SHG1YBR258C ARG80P07249 177 aa1.71□□□□□ -2.14
SHG1YBR258C ATG22P25568 528 aa1.71□□□□□ -2.14
SHG1YBR258C YKT6P36015 200 aaKnown RBP1.71□□□□□ -2.14
SHG1YBR258C YNL194CP40169 301 aa1.71□□□□□ -2.14
SHG1YBR258C IRC18P47056 224 aa1.71□□□□□ -2.14
SHG1YBR258C CCC1P47818 322 aa1.71□□□□□ -2.14
SHG1YBR258C RPS12P48589 143 aaKnown RBP1.71□□□□□ -2.14
SHG1YBR258C YNL140CP53910 189 aa1.71□□□□□ -2.14
SHG1YBR258C RPL28P02406 149 aaKnown RBP1.7□□□□□ -2.14
SHG1YBR258C YLR156WP0CE96 114 aa1.7□□□□□ -2.14
SHG1YBR258C YLR159WP0CE97 114 aa1.7□□□□□ -2.14
SHG1YBR258C YLR161WP0CE98 114 aa1.7□□□□□ -2.14
SHG1YBR258C KSS1P14681 368 aa1.7□□□□□ -2.14
SHG1YBR258C STE18P18852 110 aa1.7□□□□□ -2.14
SHG1YBR258C CBT1P36038 271 aaPredicted RBP1.7□□□□□ -2.14
SHG1YBR258C SRL3P36167 246 aa1.7□□□□□ -2.14
SHG1YBR258C TIR3P40552 269 aa1.7□□□□□ -2.14
SHG1YBR258C GET1P53192 235 aa1.7□□□□□ -2.14
SHG1YBR258C MET31Q03081 177 aa1.7□□□□□ -2.14
SHG1YBR258C YDR102CQ03864 110 aa1.7□□□□□ -2.14
SHG1YBR258C YHR214C-EQ8TGK0 99 aa1.7□□□□□ -2.14
SHG1YBR258C YDR157WA0A023PZE8 133 aa1.69□□□□□ -2.14
SHG1YBR258C RPL27BP0C2H7 136 aaKnown RBP1.69□□□□□ -2.14
SHG1YBR258C RPB4P20433 221 aaPredicted RBP1.69□□□□□ -2.14
SHG1YBR258C MRPS28P21771 286 aa1.69□□□□□ -2.14
SHG1YBR258C UMP1P38293 148 aa1.69□□□□□ -2.14
SHG1YBR258C FLX1P40464 311 aa1.69□□□□□ -2.14
SHG1YBR258C YGR050CP53231 118 aa1.69□□□□□ -2.14
SHG1YBR258C PDR17P53844 350 aa1.69□□□□□ -2.14
SHG1YBR258C LCL2Q08045 131 aa1.69□□□□□ -2.14
SHG1YBR258C MCP1Q12106 302 aa1.69□□□□□ -2.14
SHG1YBR258C TSC3Q3E790 80 aa1.69□□□□□ -2.14
SHG1YBR258C TDA8Q6B2U8 126 aa1.69□□□□□ -2.14
SHG1YBR258C GCN3P14741 305 aa1.68□□□□□ -2.14
SHG1YBR258C IDH1P28834 360 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
SHG1YBR258C UTP30P36144 274 aaKnown RBP1.68□□□□□ -2.14
SHG1YBR258C MRPL28P36527 147 aa1.68□□□□□ -2.14
SHG1YBR258C MRPL17P36528 281 aa1.68□□□□□ -2.14
SHG1YBR258C VTC1P40046 129 aaRIP-Chip data1.68□□□□□ -2.14not detected
SHG1YBR258C YRB2P40517 327 aa1.68□□□□□ -2.14
SHG1YBR258C BUD25P85052 153 aa1.68□□□□□ -2.14
SHG1YBR258C SNZ1Q03148 297 aa1.68□□□□□ -2.14
SHG1YBR258C SML1Q04964 104 aa1.68□□□□□ -2.14
SHG1YBR258C YNG1Q08465 219 aa1.68□□□□□ -2.14
SHG1YBR258C YCL012CQ8J0M4 134 aa1.68□□□□□ -2.14
SHG1YBR258C ROX3P25046 220 aa1.67□□□□□ -2.14
SHG1YBR258C NTG1P31378 399 aa1.67□□□□□ -2.14
SHG1YBR258C IKI1P38874 309 aa1.67□□□□□ -2.14
SHG1YBR258C NHP10Q03435 203 aa1.67□□□□□ -2.14
SHG1YBR258C BNA7Q04066 261 aa1.67□□□□□ -2.14
SHG1YBR258C IRC19Q07843 230 aa1.67□□□□□ -2.14
SHG1YBR258C BRX1Q08235 291 aaKnown RBP1.67□□□□□ -2.14
SHG1YBR258C FCY1Q12178 158 aa1.67□□□□□ -2.14
SHG1YBR258C YMR105W-AQ8TGS8 64 aa1.67□□□□□ -2.14
SHG1YBR258C MAG1P22134 296 aaKnown RBP1.66□□□□□ -2.14
SHG1YBR258C RFA3P26755 122 aaKnown RBP1.66□□□□□ -2.14
SHG1YBR258C YCR087C-AP37263 153 aa1.66□□□□□ -2.14
SHG1YBR258C FMP32P43557 207 aa1.66□□□□□ -2.14
SHG1YBR258C LSM7P53905 115 aaKnown RBP1.66□□□□□ -2.14
SHG1YBR258C COG5P53951 403 aa1.66□□□□□ -2.14
SHG1YBR258C YDR274CP87283 123 aa1.66□□□□□ -2.14
SHG1YBR258C PET191Q02772 108 aa1.66□□□□□ -2.14
SHG1YBR258C CSN9Q03981 162 aa1.66□□□□□ -2.14
SHG1YBR258C HOR7Q05827 59 aa1.66□□□□□ -2.14
SHG1YBR258C FSF1Q12029 327 aaKnown RBP1.66□□□□□ -2.14
SHG1YBR258C GET4Q12125 312 aa1.66□□□□□ -2.14
SHG1YBR258C FZF1P32805 299 aa1.65□□□□□ -2.15
SHG1YBR258C SNC2P33328 115 aa1.65□□□□□ -2.15
SHG1YBR258C SHE2P36068 246 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
SHG1YBR258C YNL217WP40152 326 aa1.65□□□□□ -2.15
SHG1YBR258C GVP36P40531 326 aaKnown RBP1.65□□□□□ -2.15
SHG1YBR258C VPS55P47111 140 aa1.65□□□□□ -2.15
SHG1YBR258C GGA1Q06336 557 aa1.65□□□□□ -2.15
SHG1YBR258C YPL162CQ12042 273 aa1.65□□□□□ -2.15
SHG1YBR258C YOR343CQ12484 108 aa1.65□□□□□ -2.15
SHG1YBR258C DDP1Q99321 188 aaKnown RBP1.65□□□□□ -2.15
SHG1YBR258C SIR2P06700 562 aa1.64□□□□□ -2.15
SHG1YBR258C URA5P13298 226 aaKnown RBP1.64□□□□□ -2.15
SHG1YBR258C YGL010WP25338 174 aa1.64□□□□□ -2.15
SHG1YBR258C SKG1P36169 355 aa1.64□□□□□ -2.15
SHG1YBR258C RMD6P39975 231 aa1.64□□□□□ -2.15
SHG1YBR258C CUS2P53830 285 aaPredicted RBP1.64□□□□□ -2.15
SHG1YBR258C YLR162WQ06235 118 aa1.64□□□□□ -2.15
SHG1YBR258C YMR030W-AQ3E760 96 aa1.64□□□□□ -2.15
SHG1YBR258C RPB3P16370 318 aaKnown RBP1.63□□□□□ -2.15
SHG1YBR258C MGT1P26188 188 aa1.63□□□□□ -2.15
SHG1YBR258C FMP23P38231 175 aa1.63□□□□□ -2.15
SHG1YBR258C YBR219CP38317 127 aa1.63□□□□□ -2.15
SHG1YBR258C EFM5P53200 248 aaKnown RBP1.63□□□□□ -2.15
SHG1YBR258C YNR077CP53758 84 aa1.63□□□□□ -2.15
SHG1YBR258C ADF1Q2V2Q1 113 aa1.63□□□□□ -2.15
SHG1YBR258C MER1P16523 270 aa1.62□□□□□ -2.15
SHG1YBR258C ATP15P21306 62 aa1.62□□□□□ -2.15
SHG1YBR258C BET1P22804 142 aa1.62□□□□□ -2.15
SHG1YBR258C PTC1P35182 281 aa1.62□□□□□ -2.15
SHG1YBR258C UPS2P35200 230 aa1.62□□□□□ -2.15
SHG1YBR258C TMA19P35691 167 aaKnown RBP1.62□□□□□ -2.15
SHG1YBR258C TRM5P38793 499 aa1.62□□□□□ -2.15
SHG1YBR258C POP3P53833 195 aaPredicted RBP1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms