RNA–Protein interactions for RNA: YBL093C

ROX3, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene ROX3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROX3	YBL093C	HXT14	P42833	540 aa		4.3	□□□□□ -1.72
ROX3	YBL093C	SMD3	P43321	101 aa	Known RBP	4.3	□□□□□ -1.72
ROX3	YBL093C	RIB4	P50861	169 aa	Predicted RBP	4.3	□□□□□ -1.72
ROX3	YBL093C	AVO2	Q04749	426 aa		4.3	□□□□□ -1.72
ROX3	YBL093C	POS5	Q06892	414 aa		4.3	□□□□□ -1.72
ROX3	YBL093C	CSI2	Q08054	341 aa		4.3	□□□□□ -1.72
ROX3	YBL093C	SPO24	Q3E752	67 aa		4.3	□□□□□ -1.72
ROX3	YBL093C	SOD1	P00445	154 aa	Known RBP	4.29	□□□□□ -1.72
ROX3	YBL093C	HTB1	P02293	131 aa	Known RBP	4.29	□□□□□ -1.72
ROX3	YBL093C	BGL2	P15703	313 aa	Known RBP	4.29	□□□□□ -1.72
ROX3	YBL093C	TOM40	P23644	387 aa	Known RBP	4.29	□□□□□ -1.72
ROX3	YBL093C	VMA11	P32842	164 aa		4.29	□□□□□ -1.72
ROX3	YBL093C	RIB5	P38145	238 aa		4.29	□□□□□ -1.72
ROX3	YBL093C	QDR3	P38227	689 aa		4.29	□□□□□ -1.72
ROX3	YBL093C	YJR015W	P47090	510 aa		4.29	□□□□□ -1.72
ROX3	YBL093C	PAU4	P53427	120 aa		4.29	□□□□□ -1.72
ROX3	YBL093C	SSU72	P53538	206 aa	Predicted RBP	4.29	□□□□□ -1.72
ROX3	YBL093C	HHO1	P53551	258 aa		4.29	□□□□□ -1.72
ROX3	YBL093C	CAF40	P53829	373 aa		4.29	□□□□□ -1.72
ROX3	YBL093C	BOR1	P53838	576 aa		4.29	□□□□□ -1.72
ROX3	YBL093C	YMR007W	Q03675	126 aa		4.29	□□□□□ -1.72
ROX3	YBL093C	CTR3	Q06686	241 aa		4.29	□□□□□ -1.72
ROX3	YBL093C	SRL1	Q08673	210 aa		4.29	□□□□□ -1.72
ROX3	YBL093C	YLR112W	Q12130	139 aa		4.29	□□□□□ -1.72
ROX3	YBL093C	FPR2	P32472	135 aa		4.28	□□□□□ -1.72
ROX3	YBL093C	YAR068W	P39564	161 aa		4.28	□□□□□ -1.72
ROX3	YBL093C	PHS1	P40857	217 aa		4.28	□□□□□ -1.72
ROX3	YBL093C	ABM1	P47146	123 aa		4.28	□□□□□ -1.72
ROX3	YBL093C	YHP1	Q04116	353 aa		4.28	□□□□□ -1.72
ROX3	YBL093C	YMR317W	Q04893	1140 aa		4.28	□□□□□ -1.72
ROX3	YBL093C	FCY1	Q12178	158 aa		4.28	□□□□□ -1.72
ROX3	YBL093C	ERV2	Q12284	196 aa		4.28	□□□□□ -1.72
ROX3	YBL093C	SME1	Q12330	94 aa	Predicted RBP	4.28	□□□□□ -1.72
ROX3	YBL093C	YPR145C-A	Q2V2P0	78 aa		4.28	□□□□□ -1.72
ROX3	YBL093C	PAU1	P0CE88	120 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	PAU14	P0CE89	120 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	PAU6	P0CE90	120 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	PAU18	P0CE91	120 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	PAU8	P0CE92	120 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	PAU11	P0CE93	120 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	ALK2	P32789	676 aa	Predicted RBP	4.27	□□□□□ -1.73
ROX3	YBL093C	CSH1	P38287	376 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	DER1	P38307	211 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	PAU13	P38725	120 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	BDH1	P39714	382 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	LST8	P41318	303 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	LOC1	P43586	204 aa	Predicted RBP	4.27	□□□□□ -1.73
ROX3	YBL093C	BNS1	P50084	137 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	MIC27	P50945	234 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	TIM21	P53220	239 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	PAU10	Q03050	120 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	SHH3	Q04487	196 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	MCH1	Q07376	486 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	PAU20	Q08322	120 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	RAD28	Q12021	506 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	GEP5	Q12393	293 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	PAU9	Q3E770	120 aa		4.27	□□□□□ -1.73
ROX3	YBL093C	YMR316C-A	I2HB70	103 aa		4.26	□□□□□ -1.73
ROX3	YBL093C	YLR302C	O13544	120 aa		4.26	□□□□□ -1.73
ROX3	YBL093C	PIS1	P06197	220 aa	Known RBP	4.26	□□□□□ -1.73
ROX3	YBL093C	SEC59	P20048	519 aa		4.26	□□□□□ -1.73
ROX3	YBL093C	YCR022C	P25620	114 aa		4.26	□□□□□ -1.73
ROX3	YBL093C	NTF2	P33331	125 aa	Known RBP	4.26	□□□□□ -1.73
ROX3	YBL093C	ATG8	P38182	117 aa	RIP-Chip data	4.26	□□□□□ -1.73	not detected
ROX3	YBL093C	NOP16	P40007	231 aa	Known RBP	4.26	□□□□□ -1.73
ROX3	YBL093C	PGD1	P40356	397 aa		4.26	□□□□□ -1.73
ROX3	YBL093C	BNA1	P47096	177 aa		4.26	□□□□□ -1.73
ROX3	YBL093C	YIP1	P53039	248 aa		4.26	□□□□□ -1.73
ROX3	YBL093C	YGR018C	P53211	109 aa		4.26	□□□□□ -1.73
ROX3	YBL093C	JID1	Q12350	301 aa		4.26	□□□□□ -1.73
ROX3	YBL093C	NUM1	Q00402	2748 aa		4.26	□□□□□ -1.73
ROX3	YBL093C	ILV5	P06168	395 aa	Known RBP	4.25	□□□□□ -1.73
ROX3	YBL093C	ADH3	P07246	375 aa	Known RBP	4.25	□□□□□ -1.73
ROX3	YBL093C	RPL42A	P0CX27	106 aa	Known RBP	4.25	□□□□□ -1.73
ROX3	YBL093C	RPL42B	P0CX28	106 aa	Known RBP	4.25	□□□□□ -1.73
ROX3	YBL093C	ACP1	P32463	125 aa		4.25	□□□□□ -1.73
ROX3	YBL093C	MRPL4	P36517	319 aa		4.25	□□□□□ -1.73
ROX3	YBL093C	YBL071C	P38185	102 aa		4.25	□□□□□ -1.73
ROX3	YBL093C	YPT31	P38555	223 aa	Known RBP	4.25	□□□□□ -1.73
ROX3	YBL093C	RTS2	P40962	232 aa		4.25	□□□□□ -1.73
ROX3	YBL093C	LST7	P53237	242 aa		4.25	□□□□□ -1.73
ROX3	YBL093C	IZH1	Q03419	316 aa		4.25	□□□□□ -1.73
ROX3	YBL093C	YMR166C	Q03829	368 aa		4.25	□□□□□ -1.73
ROX3	YBL093C	NDE2	Q07500	545 aa		4.25	□□□□□ -1.73
ROX3	YBL093C	YLR118C	Q12354	227 aa		4.25	□□□□□ -1.73
ROX3	YBL093C	PAA1	Q12447	191 aa	Known RBP	4.25	□□□□□ -1.73
ROX3	YBL093C	PHO85	P17157	305 aa		4.24	□□□□□ -1.73
ROX3	YBL093C	RAD23	P32628	398 aa	Known RBP	4.24	□□□□□ -1.73
ROX3	YBL093C	RPS0A	P32905	252 aa	Known RBP	4.24	□□□□□ -1.73
ROX3	YBL093C	MRPS9	P38120	278 aa		4.24	□□□□□ -1.73
ROX3	YBL093C	SAS2	P40963	338 aa		4.24	□□□□□ -1.73
ROX3	YBL093C	VMA21	P41806	77 aa		4.24	□□□□□ -1.73
ROX3	YBL093C	WWM1	P43582	211 aa	Known RBP	4.24	□□□□□ -1.73
ROX3	YBL093C	DAN1	P47178	298 aa		4.24	□□□□□ -1.73
ROX3	YBL093C	DSK2	P48510	373 aa		4.24	□□□□□ -1.73
ROX3	YBL093C	ATC1	Q04005	294 aa		4.24	□□□□□ -1.73
ROX3	YBL093C	RPS22A	P0C0W1	130 aa	Known RBP	4.23	□□□□□ -1.73
ROX3	YBL093C	YCR043C	P25361	127 aa		4.23	□□□□□ -1.73
ROX3	YBL093C	POP5	P28005	173 aa		4.23	□□□□□ -1.73
ROX3	YBL093C	SDH4	P37298	181 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms