RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C ECM14P38836 430 aa1.87□□□□□ -2.11
CLN3YAL040C COX14P39103 70 aa1.87□□□□□ -2.11
CLN3YAL040C YEA6P39953 335 aa1.87□□□□□ -2.11
CLN3YAL040C CCS1P40202 249 aaKnown RBP1.87□□□□□ -2.11
CLN3YAL040C GLR1P41921 483 aaKnown RBP1.87□□□□□ -2.11
CLN3YAL040C SNN1P48232 102 aa1.87□□□□□ -2.11
CLN3YAL040C UBC12P52491 188 aa1.87□□□□□ -2.11
CLN3YAL040C CRH1P53301 507 aa1.87□□□□□ -2.11
CLN3YAL040C WSC2P53832 503 aa1.87□□□□□ -2.11
CLN3YAL040C YDC1Q02896 317 aa1.87□□□□□ -2.11
CLN3YAL040C FIT1Q04433 528 aa1.87□□□□□ -2.11
CLN3YAL040C RIM9Q04734 239 aa1.87□□□□□ -2.11
CLN3YAL040C ERP1Q05359 219 aaKnown RBP1.87□□□□□ -2.11
CLN3YAL040C ARC18Q05933 178 aaKnown RBP1.87□□□□□ -2.11
CLN3YAL040C NOC4Q06512 552 aaPredicted RBP1.87□□□□□ -2.11
CLN3YAL040C YLR112WQ12130 139 aa1.87□□□□□ -2.11
CLN3YAL040C DGK1Q12382 290 aa1.87□□□□□ -2.11
CLN3YAL040C UBI4P0CG63 381 aaKnown RBP1.86□□□□□ -2.11
CLN3YAL040C CUP1-1P0CX80 61 aa1.86□□□□□ -2.11
CLN3YAL040C CUP1-2P0CX81 61 aa1.86□□□□□ -2.11
CLN3YAL040C YCR025CP25352 136 aa1.86□□□□□ -2.11
CLN3YAL040C YOX1P34161 385 aa1.86□□□□□ -2.11
CLN3YAL040C MIX23P38162 196 aa1.86□□□□□ -2.11
CLN3YAL040C ERV15P38312 142 aa1.86□□□□□ -2.11
CLN3YAL040C SRP14P38985 146 aa1.86□□□□□ -2.11
CLN3YAL040C ASP1P38986 381 aaPredicted RBP1.86□□□□□ -2.11
CLN3YAL040C PIR5P46999 287 aa1.86□□□□□ -2.11
CLN3YAL040C MCM22P47167 239 aa1.86□□□□□ -2.11
CLN3YAL040C MSO1P53604 210 aaKnown RBP1.86□□□□□ -2.11
CLN3YAL040C HSK3P69852 69 aa1.86□□□□□ -2.11
CLN3YAL040C RPL21AQ02753 160 aaKnown RBP1.86□□□□□ -2.11
CLN3YAL040C GMC1Q04399 608 aa1.86□□□□□ -2.11
CLN3YAL040C YMR254CQ04838 102 aa1.86□□□□□ -2.11
CLN3YAL040C SNA4Q07549 140 aa1.86□□□□□ -2.11
CLN3YAL040C YOR292CQ08743 309 aa1.86□□□□□ -2.11
CLN3YAL040C RFM1Q12192 310 aa1.86□□□□□ -2.11
CLN3YAL040C RPL21BQ12672 160 aaKnown RBP1.86□□□□□ -2.11
CLN3YAL040C LSO2Q3E772 92 aaKnown RBP1.86□□□□□ -2.11
CLN3YAL040C ATG40Q99325 256 aa1.86□□□□□ -2.11
CLN3YAL040C PIS1P06197 220 aaKnown RBP1.86□□□□□ -2.11
CLN3YAL040C PET494P07390 489 aaPredicted RBP1.86□□□□□ -2.11
CLN3YAL040C ALK2P32789 676 aaPredicted RBP1.86□□□□□ -2.11
CLN3YAL040C YGP1P38616 354 aaKnown RBP1.86□□□□□ -2.11
CLN3YAL040C FLO5P38894 1075 aa1.86□□□□□ -2.11
CLN3YAL040C OST3P48439 350 aa1.86□□□□□ -2.11
CLN3YAL040C MMS2P53152 137 aa1.86□□□□□ -2.11
CLN3YAL040C GEP7P53171 287 aa1.86□□□□□ -2.11
CLN3YAL040C ALG13P53178 202 aa1.86□□□□□ -2.11
CLN3YAL040C YGR050CP53231 118 aa1.86□□□□□ -2.11
CLN3YAL040C GIS2P53849 153 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
CLN3YAL040C YMR082CQ04276 118 aa1.86□□□□□ -2.11
CLN3YAL040C DPP1Q05521 289 aa1.86□□□□□ -2.11
CLN3YAL040C UPS1Q05776 175 aa1.86□□□□□ -2.11
CLN3YAL040C TMC1Q08422 150 aaPredicted RBP1.86□□□□□ -2.11
CLN3YAL040C SRL1Q08673 210 aa1.86□□□□□ -2.11
CLN3YAL040C FCF2Q12035 217 aaPredicted RBP1.86□□□□□ -2.11
CLN3YAL040C YOR015WQ12169 119 aa1.86□□□□□ -2.11
CLN3YAL040C VMA9Q3E7B6 73 aa1.86□□□□□ -2.11
CLN3YAL040C YMR105W-AQ8TGS8 64 aa1.86□□□□□ -2.11
CLN3YAL040C RPL23AP0CX41 137 aaKnown RBP1.85□□□□□ -2.11
CLN3YAL040C RPL23BP0CX42 137 aaKnown RBP1.85□□□□□ -2.11
CLN3YAL040C YCR101CP25607 182 aa1.85□□□□□ -2.11
CLN3YAL040C YCR022CP25620 114 aa1.85□□□□□ -2.11
CLN3YAL040C INO2P26798 304 aa1.85□□□□□ -2.11
CLN3YAL040C KTI12P34253 313 aaKnown RBP1.85□□□□□ -2.11
CLN3YAL040C YJR056CP47115 236 aa1.85□□□□□ -2.11
CLN3YAL040C YPS5P53057 165 aa1.85□□□□□ -2.11
CLN3YAL040C APJ1P53940 528 aa1.85□□□□□ -2.11
CLN3YAL040C SNO1Q03144 224 aa1.85□□□□□ -2.11
CLN3YAL040C ADD37Q03233 198 aa1.85□□□□□ -2.11
CLN3YAL040C POC4Q12245 148 aaPredicted RBP1.85□□□□□ -2.11
CLN3YAL040C PRR2Q12310 699 aa1.85□□□□□ -2.11
CLN3YAL040C YCL048W-AQ2V2Q2 79 aa1.85□□□□□ -2.11
CLN3YAL040C BOL1Q3E793 110 aa1.85□□□□□ -2.11
CLN3YAL040C URA5P13298 226 aaKnown RBP1.84□□□□□ -2.11
CLN3YAL040C ROX3P25046 220 aa1.84□□□□□ -2.11
CLN3YAL040C CNB1P25296 175 aa1.84□□□□□ -2.11
CLN3YAL040C AGA1P32323 725 aa1.84□□□□□ -2.11
CLN3YAL040C RPL14AP36105 138 aaKnown RBP1.84□□□□□ -2.11
CLN3YAL040C SLM6P38343 150 aa1.84□□□□□ -2.11
CLN3YAL040C RPL14BP38754 138 aaKnown RBP1.84□□□□□ -2.11
CLN3YAL040C YEA4P40004 342 aa1.84□□□□□ -2.11
CLN3YAL040C SWM2P40342 146 aa1.84□□□□□ -2.11
CLN3YAL040C PRM5P40476 318 aa1.84□□□□□ -2.11
CLN3YAL040C EMC5P40540 141 aa1.84□□□□□ -2.11
CLN3YAL040C LCB3P47013 409 aa1.84□□□□□ -2.11
CLN3YAL040C ARP3P47117 449 aaKnown RBP1.84□□□□□ -2.11
CLN3YAL040C PDR17P53844 350 aa1.84□□□□□ -2.11
CLN3YAL040C FMP41P53889 259 aaKnown RBP1.84□□□□□ -2.11
CLN3YAL040C FYV6P53913 173 aa1.84□□□□□ -2.11
CLN3YAL040C DYN2Q02647 92 aa1.84□□□□□ -2.11
CLN3YAL040C YPL067CQ02754 198 aa1.84□□□□□ -2.11
CLN3YAL040C YMR090WQ04304 227 aaKnown RBP1.84□□□□□ -2.11
CLN3YAL040C FSH2Q05015 223 aa1.84□□□□□ -2.11
CLN3YAL040C LIP2Q06005 328 aa1.84□□□□□ -2.11
CLN3YAL040C ATO3Q12359 275 aa1.84□□□□□ -2.11
CLN3YAL040C COX19Q3E731 98 aa1.84□□□□□ -2.11
CLN3YAL040C YOS1Q3E834 85 aa1.84□□□□□ -2.11
CLN3YAL040C URA2P07259 2214 aaKnown RBP1.84□□□□□ -2.12
CLN3YAL040C MRS3P10566 314 aa1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 50.4 ms