RNA–Protein interactions for RNA: SCR1

SCR1, Transcript of RNA subunit of the Signal Recognition Particle (SRP), yeastyeast

Gene SCR1, Length 522 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCR1SCR1 MST28P39552 234 aa11.28□□□□□ -0.6
SCR1SCR1 GCV3P39726 170 aaPredicted RBP11.28□□□□□ -0.6
SCR1SCR1 IMP2P46972 177 aa11.28□□□□□ -0.6
SCR1SCR1 ATG27P46989 271 aa11.28□□□□□ -0.6
SCR1SCR1 HAM1P47119 197 aaKnown RBP11.28□□□□□ -0.6
SCR1SCR1 MST27P53176 234 aa11.28□□□□□ -0.6
SCR1SCR1 MRPS17Q03246 237 aaPredicted RBP11.28□□□□□ -0.6
SCR1SCR1 IZH3Q07959 543 aa11.28□□□□□ -0.6
SCR1SCR1 YGL194C-AQ2V2P6 80 aa11.28□□□□□ -0.6
SCR1SCR1 SIP1P32578 815 aa11.27□□□□□ -0.61
SCR1SCR1 CMC1P36064 111 aa11.27□□□□□ -0.61
SCR1SCR1 YNR071CP53757 342 aa11.27□□□□□ -0.61
SCR1SCR1 CTR3Q06686 241 aa11.27□□□□□ -0.61
SCR1SCR1 SIM1P40472 476 aa11.26□□□□□ -0.61
SCR1SCR1 GPI2P46961 280 aa11.26□□□□□ -0.61
SCR1SCR1 DUO1P53168 247 aaKnown RBP11.26□□□□□ -0.61
SCR1SCR1 AYT1Q12226 474 aa11.26□□□□□ -0.61
SCR1SCR1 YBL059WP34224 193 aa11.25□□□□□ -0.61
SCR1SCR1 DER1P38307 211 aa11.25□□□□□ -0.61
SCR1SCR1 YBR292CP38357 123 aa11.25□□□□□ -0.61
SCR1SCR1 PET100P38958 111 aa11.25□□□□□ -0.61
SCR1SCR1 RIB4P50861 169 aaPredicted RBP11.24□□□□□ -0.61
SCR1SCR1 YPL162CQ12042 273 aa11.24□□□□□ -0.61
SCR1SCR1 SPO13P23624 291 aa11.23□□□□□ -0.61
SCR1SCR1 EMP24P32803 203 aaKnown RBP11.23□□□□□ -0.61
SCR1SCR1 FLO5P38894 1075 aa11.23□□□□□ -0.61
SCR1SCR1 GLE2P40066 365 aa11.23□□□□□ -0.61
SCR1SCR1 JAC1P53193 184 aa11.23□□□□□ -0.61
SCR1SCR1 CAF40P53829 373 aa11.23□□□□□ -0.61
SCR1SCR1 YMR007WQ03675 126 aa11.23□□□□□ -0.61
SCR1SCR1 CDC50P25656 391 aa11.22□□□□□ -0.61
SCR1SCR1 AHT1P29589 182 aa11.22□□□□□ -0.61
SCR1SCR1 AUA1P32450 94 aa11.22□□□□□ -0.61
SCR1SCR1 MIC26P50087 233 aa11.22□□□□□ -0.61
SCR1SCR1 ATC1Q04005 294 aa11.22□□□□□ -0.61
SCR1SCR1 ZRC1P20107 442 aa11.21□□□□□ -0.61
SCR1SCR1 TIR2P33890 251 aa11.21□□□□□ -0.61
SCR1SCR1 YRA2P36036 203 aaKnown RBP RIP-Chip data11.21□□□□□ -0.61not detected
SCR1SCR1 PRE9P23638 258 aaKnown RBP11.2□□□□□ -0.62
SCR1SCR1 YIL077CP40508 320 aa11.2□□□□□ -0.62
SCR1SCR1 YIP3P53633 176 aa11.2□□□□□ -0.62
SCR1SCR1 YOR011W-AQ3E807 68 aa11.2□□□□□ -0.62
SCR1SCR1 DDI2P0CH63 225 aa11.19□□□□□ -0.62
SCR1SCR1 DDI3P0CH64 225 aa11.19□□□□□ -0.62
SCR1SCR1 IZH1Q03419 316 aa11.19□□□□□ -0.62
SCR1SCR1 AVO2Q04749 426 aa11.19□□□□□ -0.62
SCR1SCR1 SCW10Q04951 389 aa11.19□□□□□ -0.62
SCR1SCR1 YNL146C-AQ3E7Z1 64 aa11.19□□□□□ -0.62
SCR1SCR1 PHD1P36093 366 aa11.18□□□□□ -0.62
SCR1SCR1 SRL3P36167 246 aa11.18□□□□□ -0.62
SCR1SCR1 LSM2P38203 95 aaKnown RBP11.18□□□□□ -0.62
SCR1SCR1 AIM24P47127 394 aa11.18□□□□□ -0.62
SCR1SCR1 ISU1Q03020 165 aa11.18□□□□□ -0.62
SCR1SCR1 HSP12P22943 109 aaKnown RBP11.17□□□□□ -0.62
SCR1SCR1 PLP1Q04004 230 aa11.17□□□□□ -0.62
SCR1SCR1 COX12Q01519 83 aa11.16□□□□□ -0.62
SCR1SCR1 GEP3Q08622 556 aa11.16□□□□□ -0.62
SCR1SCR1 YPR063CQ12160 140 aa11.16□□□□□ -0.62
SCR1SCR1 MLF3P32047 452 aa11.15□□□□□ -0.62
SCR1SCR1 EMC5P40540 141 aa11.15□□□□□ -0.62
SCR1SCR1 LCB3P47013 409 aa11.15□□□□□ -0.62
SCR1SCR1 MRX11Q03079 207 aa11.15□□□□□ -0.62
SCR1SCR1 YOL160WQ08321 113 aa11.15□□□□□ -0.62
SCR1SCR1 PRM7Q12459 698 aa11.15□□□□□ -0.62
SCR1SCR1 SHG1P38337 142 aa11.14□□□□□ -0.63
SCR1SCR1 SMD3P43321 101 aaKnown RBP11.14□□□□□ -0.63
SCR1SCR1 SNX4P47057 423 aa11.14□□□□□ -0.63
SCR1SCR1 YCL001W-AP87012 153 aa11.14□□□□□ -0.63
SCR1SCR1 YOR015WQ12169 119 aa11.14□□□□□ -0.63
SCR1SCR1 YPR145C-AQ2V2P0 78 aa11.14□□□□□ -0.63
SCR1SCR1 RPS2P25443 254 aaKnown RBP11.13□□□□□ -0.63
SCR1SCR1 LOA1Q06508 300 aa11.13□□□□□ -0.63
SCR1SCR1 ADD37Q03233 198 aa11.12□□□□□ -0.63
SCR1SCR1 YMR244WQ04018 355 aa11.12□□□□□ -0.63
SCR1SCR1 SPC25P40014 221 aa11.11□□□□□ -0.63
SCR1SCR1 MCM22P47167 239 aa11.11□□□□□ -0.63
SCR1SCR1 DSK2P48510 373 aa11.11□□□□□ -0.63
SCR1SCR1 ATX2Q12067 313 aa11.11□□□□□ -0.63
SCR1SCR1 GNP1P48813 663 aa11.1□□□□□ -0.63
SCR1SCR1 PHO23P50947 330 aa11.1□□□□□ -0.63
SCR1SCR1 MRPS8Q03799 155 aa11.1□□□□□ -0.63
SCR1SCR1 FIT2Q08906 153 aa11.1□□□□□ -0.63
SCR1SCR1 NRG2P38082 220 aa11.09□□□□□ -0.63
SCR1SCR1 MBB1P39534 108 aa11.09□□□□□ -0.63
SCR1SCR1 MRPL20P22354 195 aaPredicted RBP11.08□□□□□ -0.64
SCR1SCR1 YGR025WP53216 100 aa11.08□□□□□ -0.64
SCR1SCR1 STP4Q07351 490 aa11.08□□□□□ -0.64
SCR1SCR1 RPP1AP05318 106 aaPredicted RBP11.07□□□□□ -0.64
SCR1SCR1 RPB3P16370 318 aaKnown RBP11.07□□□□□ -0.64
SCR1SCR1 YER135CP40082 130 aa11.07□□□□□ -0.64
SCR1SCR1 TMA23Q03525 211 aa11.07□□□□□ -0.64
SCR1SCR1 TY1A-BRQ12217 440 aa11.07□□□□□ -0.64
SCR1SCR1 CYC7P00045 113 aa11.06□□□□□ -0.64
SCR1SCR1 MRS1P07266 363 aa11.06□□□□□ -0.64
SCR1SCR1 SME1Q12330 94 aaPredicted RBP11.06□□□□□ -0.64
SCR1SCR1 TMA17Q12513 150 aa11.06□□□□□ -0.64
SCR1SCR1 COX19Q3E731 98 aa11.06□□□□□ -0.64
SCR1SCR1 TRS20P38334 175 aa11.05□□□□□ -0.64
SCR1SCR1 PRE5P40302 234 aaKnown RBP11.05□□□□□ -0.64
SCR1SCR1 PAU4P53427 120 aa11.05□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 358.4 ms