RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 CLK2P49760 499 aaKnown RBP14.46□□□□□ -0.09
SCARB2-227ENST00000640957 MXI1P50539 228 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 SOX10P56693 466 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 RC3H1Q5TC82 1133 aaKnown RBP14.46□□□□□ -0.09
SCARB2-227ENST00000640957 TXNRD3NBQ6F5E7 133 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 CTAGE3PQ8IX95 158 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 ETNPPLQ8TBG4 499 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 DDX27Q96GQ7 796 aaKnown RBP14.46□□□□□ -0.09
SCARB2-227ENST00000640957 PHACTR1Q9C0D0 580 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 SLC7A8Q9UHI5 535 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 PEX2P28328 305 aa14.46□□□□□ -0.1
SCARB2-227ENST00000640957 CRKP46108 304 aa14.46□□□□□ -0.1
SCARB2-227ENST00000640957 HYIQ5T013 277 aa14.46□□□□□ -0.1
SCARB2-227ENST00000640957 GPATCH4Q5T3I0 446 aaKnown RBP14.46□□□□□ -0.1
SCARB2-227ENST00000640957 PRPF39Q86UA1 669 aaKnown RBP14.46□□□□□ -0.1
SCARB2-227ENST00000640957 MTBPQ96DY7 904 aa14.46□□□□□ -0.1
SCARB2-227ENST00000640957 PDP2Q9P2J9 529 aa14.46□□□□□ -0.1
SCARB2-227ENST00000640957 LGALS13Q9UHV8 139 aa14.46□□□□□ -0.1
SCARB2-227ENST00000640957 NOCTQ9UK39 431 aaKnown RBP14.46□□□□□ -0.1
SCARB2-227ENST00000640957 ROBO1Q9Y6N7 1651 aa14.45□□□□□ -0.1
SCARB2-227ENST00000640957 DNAJC6O75061 913 aa14.45□□□□□ -0.1
SCARB2-227ENST00000640957 SLITRK3O94933 977 aa14.45□□□□□ -0.1
SCARB2-227ENST00000640957 VAV1P15498 845 aa14.45□□□□□ -0.1
SCARB2-227ENST00000640957 ASPHQ12797 758 aa14.45□□□□□ -0.1
SCARB2-227ENST00000640957 SMTNL2Q2TAL5 461 aa14.45□□□□□ -0.1
SCARB2-227ENST00000640957 SPOPLQ6IQ16 392 aa14.45□□□□□ -0.1
SCARB2-227ENST00000640957 SCUBE1Q8IWY4 988 aa14.45□□□□□ -0.1
SCARB2-227ENST00000640957 TAS1R2Q8TE23 839 aa14.45□□□□□ -0.1
SCARB2-227ENST00000640957 BICD1Q96G01 975 aa14.45□□□□□ -0.1
SCARB2-227ENST00000640957 TRIM56Q9BRZ2 755 aaKnown RBP14.45□□□□□ -0.1
SCARB2-227ENST00000640957 ZWILCHQ9H900 591 aa14.45□□□□□ -0.1
SCARB2-227ENST00000640957 KCNK13Q9HB14 408 aa14.45□□□□□ -0.1
SCARB2-227ENST00000640957 XIRP1Q702N8 1843 aaKnown RBP14.45□□□□□ -0.1
SCARB2-227ENST00000640957 LPXNO60711 386 aa14.45□□□□□ -0.1
SCARB2-227ENST00000640957 COG7P83436 770 aa14.45□□□□□ -0.1
SCARB2-227ENST00000640957 AOC3Q16853 763 aa14.45□□□□□ -0.1
SCARB2-227ENST00000640957 LCA5Q86VQ0 697 aa14.45□□□□□ -0.1
SCARB2-227ENST00000640957 CCDC89Q8N998 374 aa14.45□□□□□ -0.1
SCARB2-227ENST00000640957 PAFAH2Q99487 392 aa14.45□□□□□ -0.1
SCARB2-227ENST00000640957 GRIP2Q9C0E4 1043 aa14.45□□□□□ -0.1
SCARB2-227ENST00000640957 GTF3C4Q9UKN8 822 aa14.45□□□□□ -0.1
SCARB2-227ENST00000640957 TCRBV7S3A2A0A539 114 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 PRR5-ARHGAP8B1AHC4 643 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 TYROBPO43914 113 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 ECE2O60344 883 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 AVILO75366 819 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 SHMT1P34896 483 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 GPX6P59796 221 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 ARHGAP8P85298 464 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 CETN1Q12798 172 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 TRIP10Q15642 601 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 ABCB5Q2M3G0 1257 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 EML3Q32P44 896 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 RBM44Q6ZP01 1051 aaKnown RBP14.44□□□□□ -0.1
SCARB2-227ENST00000640957 MARK2Q7KZI7 788 aaKnown RBP14.44□□□□□ -0.1
SCARB2-227ENST00000640957 RSPH3Q86UC2 560 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 PYROXD1Q8WU10 500 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 OXNAD1Q96HP4 312 aaPredicted RBP14.44□□□□□ -0.1
SCARB2-227ENST00000640957 EBF4Q9BQW3 602 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 CENPKQ9BS16 269 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 ATXN10Q9UBB4 475 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 F5H423 210 aaPredicted RBP14.44□□□□□ -0.1
SCARB2-227ENST00000640957 ZSCAN9O15535 394 aaPredicted RBP14.44□□□□□ -0.1
SCARB2-227ENST00000640957 FOXD2O60548 495 aaPredicted RBP14.44□□□□□ -0.1
SCARB2-227ENST00000640957 GGPS1O95749 300 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 FNBP1LQ5T0N5 605 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 ULK2Q8IYT8 1036 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 LENG9Q96B70 501 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 ANKRD27Q96NW4 1050 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 PLVAPQ9BX97 442 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 AMNQ9BXJ7 453 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 GTPBP10A4D1E9 387 aaKnown RBP14.44□□□□□ -0.1
SCARB2-227ENST00000640957 PIK3CDO00329 1044 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 PIK3R2O00459 728 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 SLC16A4O15374 487 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 CIB2O75838 187 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 FAM163BP0C2L3 166 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 HSPA1LP34931 641 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 BMPR2Q13873 1038 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 MMEL1Q495T6 779 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 KCNT1Q5JUK3 1230 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 ACBD5Q5T8D3 534 aaPredicted RBP14.44□□□□□ -0.1
SCARB2-227ENST00000640957 CDHR3Q6ZTQ4 885 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 SLFN12Q8IYM2 578 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 ST13P4Q8IZP2 240 aaPredicted RBP14.44□□□□□ -0.1
SCARB2-227ENST00000640957 NAT14Q8WUY8 206 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 SERAC1Q96JX3 654 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 PPP1R36Q96LQ0 422 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 ACSS2Q9NR19 701 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 EURLQ9NYK6 297 aa14.44□□□□□ -0.1
SCARB2-227ENST00000640957 MROH7Q68CQ1 1323 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 SHANK3Q9BYB0 1731 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 PEX1O43933 1283 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 ADRB2P07550 413 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 CDK7P50613 346 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 RPL7AP62424 266 aaKnown RBP14.43□□□□□ -0.1
SCARB2-227ENST00000640957 C1orf186Q6ZWK4 172 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 PALM2Q8IXS6 379 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 CCDC110Q8TBZ0 833 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 CSRNP1Q96S65 589 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms