RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	TMEM130	Q8N3G9	435 aa		12.79	□□□□□ -0.36
PAX6-238	ENST00000638755	CPA6	Q8N4T0	437 aa		12.79	□□□□□ -0.36
PAX6-238	ENST00000638755	MAB21L3	Q8N8X9	362 aa		12.79	□□□□□ -0.36
PAX6-238	ENST00000638755	MCPH1	Q8NEM0	835 aa		12.79	□□□□□ -0.36
PAX6-238	ENST00000638755	USP13	Q92995	863 aa	Predicted RBP	12.79	□□□□□ -0.36
PAX6-238	ENST00000638755	SPACA7	Q96KW9	195 aa		12.79	□□□□□ -0.36
PAX6-238	ENST00000638755	AIFM3	Q96NN9	605 aa		12.79	□□□□□ -0.36
PAX6-238	ENST00000638755	SEPT5	Q99719	369 aa	Predicted RBP	12.79	□□□□□ -0.36
PAX6-238	ENST00000638755	PILRB	Q9UKJ0	227 aa		12.79	□□□□□ -0.36
PAX6-238	ENST00000638755	SLC6A14	Q9UN76	642 aa		12.79	□□□□□ -0.36
PAX6-238	ENST00000638755	KCNJ14	Q9UNX9	436 aa		12.79	□□□□□ -0.36
PAX6-238	ENST00000638755	RAI2	Q9Y5P3	530 aa		12.79	□□□□□ -0.36
PAX6-238	ENST00000638755	MTMR11	A4FU01	709 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	ANTXRL	A6NF34	631 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	OAZ2	O95190	189 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	KCNE1	P15382	129 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	NMT1	P30419	496 aa	Known RBP	12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	P2RY2	P41231	377 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	NAMPT	P43490	491 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	KRT32	Q14532	448 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	DUOXA1	Q1HG43	343 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	PIK3AP1	Q6ZUJ8	805 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	USP37	Q86T82	979 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	DEFB119	Q8N690	84 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	SPRYD3	Q8NCJ5	442 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	OLIG1	Q8TAK6	271 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	RIN3	Q8TB24	985 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	USP33	Q8TEY7	942 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	ECT2	Q9H8V3	914 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	IL21	Q9HBE4	155 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	POLD4	Q9HCU8	107 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	TDP1	Q9NUW8	608 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	MYO18B	Q8IUG5	2567 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	CFAP46	Q8IYW2	2715 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	KIAA1549L	Q6ZVL6	1849 aa		12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	TNRC6B	Q9UPQ9	1833 aa	Known RBP	12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	ZNF638	Q14966	1978 aa	Known RBP	12.78	□□□□□ -0.36
PAX6-238	ENST00000638755	OR6C75	A6NL08	312 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	TK2	O00142	265 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	ALDH1A2	O94788	518 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	SERPINF2	P08697	491 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	HSPA4	P34932	840 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	DPP6	P42658	865 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	CYP4F3	Q08477	520 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	VEPH1	Q14D04	833 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	PDGFRL	Q15198	375 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	CRY1	Q16526	586 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	TSGA10IP	Q3SY00	556 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	ZNF568	Q3ZCX4	644 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	LMBRD2	Q68DH5	695 aa	Predicted RBP	12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	GALNT17	Q6IS24	598 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	CEP76	Q8TAP6	659 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	GIPC2	Q8TF65	315 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	ACAP3	Q96P50	834 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	DCBLD2	Q96PD2	775 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	NACC1	Q96RE7	527 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	CDT1	Q9H211	546 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	BCCIP	Q9P287	314 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	PCDHA12	Q9UN75	941 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	APOBEC2	Q9Y235	224 aa	Known RBP	12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	TNFSF13B	Q9Y275	285 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	STK24	Q9Y6E0	443 aa		12.77	□□□□□ -0.37
PAX6-238	ENST00000638755	PTPRD	P23468	1912 aa		12.76	□□□□□ -0.37
PAX6-238	ENST00000638755		M0QZQ0	153 aa		12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	ARHGAP33	O14559	1287 aa		12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	LARGE1	O95461	756 aa		12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	HNRNPL	P14866	589 aa	Known RBP eCLIP	12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	ATF6	P18850	670 aa		12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	EFNA5	P52803	228 aa		12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	MGAT5B	Q3V5L5	792 aa		12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	TXNDC8	Q6A555	127 aa		12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	TMEM92	Q6UXU6	159 aa		12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	TOGARAM2	Q6ZUX3	1019 aa		12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	SLCO6A1	Q86UG4	719 aa		12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	MARCH9	Q86YJ5	346 aa		12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	CCDC26	Q8TAB7	109 aa		12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	PIP4K2C	Q8TBX8	421 aa		12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	WHAMM	Q8TF30	809 aa		12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	NAP1L4	Q99733	375 aa	Known RBP	12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	OXCT2	Q9BYC2	517 aa	Predicted RBP	12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	CAPN10	Q9HC96	672 aa		12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	POLM	Q9NP87	494 aa	Predicted RBP	12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	DUS2	Q9NX74	493 aa	Known RBP	12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	CNTN3	Q9P232	1028 aa		12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	TUBGCP4	Q9UGJ1	667 aa		12.76	□□□□□ -0.37
PAX6-238	ENST00000638755	MMP17	Q9ULZ9	603 aa		12.76	□□□□□ -0.37
PAX6-238	ENST00000638755		A0A087WV48	116 aa		12.75	□□□□□ -0.37
PAX6-238	ENST00000638755		K7EQS6	105 aa		12.75	□□□□□ -0.37
PAX6-238	ENST00000638755		K7ERI5	159 aa		12.75	□□□□□ -0.37
PAX6-238	ENST00000638755	ATXN7	O15265	892 aa	Predicted RBP	12.75	□□□□□ -0.37
PAX6-238	ENST00000638755	DEXI	O95424	95 aa		12.75	□□□□□ -0.37
PAX6-238	ENST00000638755	HARS	P12081	509 aa	Known RBP	12.75	□□□□□ -0.37
PAX6-238	ENST00000638755	XRCC6	P12956	609 aa	Known RBP eCLIP	12.75	□□□□□ -0.37
PAX6-238	ENST00000638755	PTPRB	P23467	1997 aa		12.75	□□□□□ -0.37
PAX6-238	ENST00000638755	PDIA3	P30101	505 aa	Known RBP	12.75	□□□□□ -0.37
PAX6-238	ENST00000638755	HOXD12	P35452	270 aa		12.75	□□□□□ -0.37
PAX6-238	ENST00000638755	ABCG1	P45844	678 aa		12.75	□□□□□ -0.37
PAX6-238	ENST00000638755	GOLGA4	Q13439	2230 aa	Known RBP	12.75	□□□□□ -0.37
PAX6-238	ENST00000638755	NBR1	Q14596	966 aa		12.75	□□□□□ -0.37
PAX6-238	ENST00000638755	PPP2R5A	Q15172	486 aa		12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms