RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 DENND1BQ6P3S1 775 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 SPATS2Q86XZ4 545 aaKnown RBP19.56■□□□□ 0.72
CTSD-212ENST00000637815 UPF1Q92900 1129 aaKnown RBP eCLIP19.56■□□□□ 0.721e-13■■■■■ 70.3
CTSD-212ENST00000637815 CENPTQ96BT3 561 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 FDXACB1Q9BRP7 624 aaPredicted RBP19.56■□□□□ 0.72
CTSD-212ENST00000637815 PDZD7Q9H5P4 517 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 VRTNQ9H8Y1 702 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 IVNS1ABPQ9Y6Y0 642 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 KRT1P04264 644 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 KRT19P08727 400 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 KLRC2P26717 231 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 ADCY8P40145 1251 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 MMP13P45452 471 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 RAP1GAPP47736 663 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 RAD23BP54727 409 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 GSCP56915 257 aaPredicted RBP19.56■□□□□ 0.72
CTSD-212ENST00000637815 LMNB2Q03252 620 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 TRIP13Q15645 432 aaPredicted RBP19.56■□□□□ 0.72
CTSD-212ENST00000637815 PTPN20Q4JDL3 420 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 CYP4A22Q5TCH4 519 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 JADE1Q6IE81 842 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 ZNF365Q70YC5 407 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 ZNF467Q7Z7K2 595 aaPredicted RBP19.56■□□□□ 0.72
CTSD-212ENST00000637815 BBOF1Q8ND07 529 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 EPS8L3Q8TE67 593 aaKnown RBP19.56■□□□□ 0.72
CTSD-212ENST00000637815 SLC10A4Q96EP9 437 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 KATNBL1Q9H079 304 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 ASB7Q9H672 318 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 PPANQ9NQ55 473 aaKnown RBP19.56■□□□□ 0.72
CTSD-212ENST00000637815 KLHL11Q9NVR0 708 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 ANAPC5Q9UJX4 755 aa19.56■□□□□ 0.72
CTSD-212ENST00000637815 RALGAPA2Q2PPJ7 1873 aa19.55■□□□□ 0.72
CTSD-212ENST00000637815 TLDC2A0PJX2 215 aa19.55■□□□□ 0.72
CTSD-212ENST00000637815 GMNCA6NCL1 334 aa19.55■□□□□ 0.72
CTSD-212ENST00000637815 RASGRF2O14827 1237 aa19.55■□□□□ 0.72
CTSD-212ENST00000637815 LIASO43766 372 aa19.55■□□□□ 0.72
CTSD-212ENST00000637815 TJP3O95049 919 aa19.55■□□□□ 0.72
CTSD-212ENST00000637815 POLR2BP30876 1174 aaKnown RBP19.55■□□□□ 0.72
CTSD-212ENST00000637815 KYAT1Q16773 422 aa19.55■□□□□ 0.72
CTSD-212ENST00000637815 WDR72Q3MJ13 1102 aa19.55■□□□□ 0.72
CTSD-212ENST00000637815 MFSD7Q6UXD7 560 aa19.55■□□□□ 0.72
CTSD-212ENST00000637815 SPOCD1Q6ZMY3 1216 aa19.55■□□□□ 0.72
CTSD-212ENST00000637815 DDX23Q9BUQ8 820 aaKnown RBP19.55■□□□□ 0.72
CTSD-212ENST00000637815 STMN4Q9H169 189 aaPredicted RBP19.55■□□□□ 0.72
CTSD-212ENST00000637815 SDCBP2Q9H190 292 aa19.55■□□□□ 0.72
CTSD-212ENST00000637815 DDX56Q9NY93 547 aaKnown RBP19.55■□□□□ 0.72
CTSD-212ENST00000637815 SLC45A1Q9Y2W3 748 aa19.55■□□□□ 0.72
CTSD-212ENST00000637815 FAM169AQ9Y6X4 670 aa19.55■□□□□ 0.72
CTSD-212ENST00000637815 PI4K2BG5E9Z4 385 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 ATICP31939 592 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 POLNQ7Z5Q5 900 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 AFG1LQ8WV93 481 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 RAPGEF5Q92565 580 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 FAM118BQ9BPY3 351 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 C16orf70Q9BSU1 422 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 ADAM7Q9H2U9 754 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 CYTH4Q9UIA0 394 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 UNCXA6NJT0 531 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 SIGLEC16A6NMB1 481 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 TTC4O95801 387 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 ITGB3P05106 788 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 KRT10P13645 584 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 CD19P15391 556 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 ARF4P18085 180 aaPredicted RBP19.54■□□□□ 0.72
CTSD-212ENST00000637815 AUHQ13825 339 aaKnown RBP19.54■□□□□ 0.72
CTSD-212ENST00000637815 RELL1Q8IUW5 271 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 SLC4A11Q8NBS3 891 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 UHMK1Q8TAS1 419 aaKnown RBP19.54■□□□□ 0.72
CTSD-212ENST00000637815 FNIP1Q8TF40 1166 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 CYP3A43Q9HB55 503 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 GGA2Q9UJY4 613 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 AKT3Q9Y243 479 aa19.54■□□□□ 0.72
CTSD-212ENST00000637815 hCG_1818297A0A087WSY0 165 aa19.53■□□□□ 0.72
CTSD-212ENST00000637815 SMIM23A6NLE4 172 aa19.53■□□□□ 0.72
CTSD-212ENST00000637815 TRIM66O15016 1216 aa19.53■□□□□ 0.72
CTSD-212ENST00000637815 CILPO75339 1184 aa19.53■□□□□ 0.72
CTSD-212ENST00000637815 CSDE1O75534 798 aaKnown RBP19.53■□□□□ 0.72
CTSD-212ENST00000637815 ZNF286BP0CG31 522 aa19.53■□□□□ 0.72
CTSD-212ENST00000637815 CDH8P55286 799 aa19.53■□□□□ 0.72
CTSD-212ENST00000637815 IFI35P80217 286 aaPredicted RBP19.53■□□□□ 0.72
CTSD-212ENST00000637815 SLC10A6Q3KNW5 377 aa19.53■□□□□ 0.72
CTSD-212ENST00000637815 TFDP3Q5H9I0 405 aa19.53■□□□□ 0.72
CTSD-212ENST00000637815 ERMARDQ5T6L9 678 aa19.53■□□□□ 0.72
CTSD-212ENST00000637815 TXNRD3NBQ6F5E7 133 aa19.53■□□□□ 0.72
CTSD-212ENST00000637815 CCHCR1Q8TD31 782 aa19.53■□□□□ 0.72
CTSD-212ENST00000637815 SYT17Q9BSW7 474 aa19.53■□□□□ 0.72
CTSD-212ENST00000637815 SMYD3Q9H7B4 428 aa19.53■□□□□ 0.72
CTSD-212ENST00000637815 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.53■□□□□ 0.72
CTSD-212ENST00000637815 PDHXO00330 501 aa19.52■□□□□ 0.72
CTSD-212ENST00000637815 STRNO43815 780 aa19.52■□□□□ 0.72
CTSD-212ENST00000637815 VTNP04004 478 aa19.52■□□□□ 0.72
CTSD-212ENST00000637815 ATF7P17544 494 aaPredicted RBP19.52■□□□□ 0.72
CTSD-212ENST00000637815 RFC1P35251 1148 aaPredicted RBP19.52■□□□□ 0.72
CTSD-212ENST00000637815 CDKN2BP42772 138 aa19.52■□□□□ 0.72
CTSD-212ENST00000637815 MTHFD1LQ6UB35 978 aa19.52■□□□□ 0.72
CTSD-212ENST00000637815 CPB2Q96IY4 423 aa19.52■□□□□ 0.72
CTSD-212ENST00000637815 WDR35Q9P2L0 1181 aa19.52■□□□□ 0.72
CTSD-212ENST00000637815 DNPEPQ9ULA0 475 aa19.52■□□□□ 0.72
CTSD-212ENST00000637815 ACSL3O95573 720 aa19.52■□□□□ 0.72
CTSD-212ENST00000637815 KRT3P12035 628 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms