RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 ERCC6L2Q5T890 1561 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 TROAPQ12815 778 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 CUL2Q13617 745 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 DNAL1Q4LDG9 190 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 LONP2Q86WA8 852 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 PPP3CCP48454 512 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 PGBD3Q8N328 593 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 DTX3LQ8TDB6 740 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 DPP3Q9NY33 737 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 RALBP11234 206 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 PTGER2P43116 358 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 CARSP49589 748 aaKnown RBP13.37□□□□□ -0.27
SCN8A-209ENST00000627620 SNX31Q8N9S9 440 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 ZKSCAN4Q969J2 545 aaPredicted RBP13.37□□□□□ -0.27
SCN8A-209ENST00000627620 OLFM3Q96PB7 478 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 SLITRK1Q96PX8 696 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 ROPN1BQ9BZX4 212 aaPredicted RBP13.37□□□□□ -0.27
SCN8A-209ENST00000627620 ROPN1Q9HAT0 212 aaPredicted RBP13.37□□□□□ -0.27
SCN8A-209ENST00000627620 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.37□□□□□ -0.27
SCN8A-209ENST00000627620 CDYLQ9Y232 598 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 COILP38432 576 aaPredicted RBP13.36□□□□□ -0.27
SCN8A-209ENST00000627620 RGS4P49798 205 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 CYTH1Q15438 398 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 SEZ6Q53EL9 994 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 PPIL6Q8IXY8 311 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 ELOA2Q8IYF1 753 aaPredicted RBP13.36□□□□□ -0.27
SCN8A-209ENST00000627620 ACSF2Q96CM8 615 aaPredicted RBP13.36□□□□□ -0.27
SCN8A-209ENST00000627620 GPR63Q9BZJ6 419 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 ADNPQ9H2P0 1102 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 UBQLN1Q9UMX0 589 aaKnown RBP13.36□□□□□ -0.27
SCN8A-209ENST00000627620 TMEM120BA0PK00 339 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 PJA2O43164 708 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 MTSS1O43312 755 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 LRRC74AQ0VAA2 488 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 GRB10Q13322 594 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 ACAD10Q6JQN1 1059 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 ISCUQ9H1K1 167 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 KLK14Q9P0G3 267 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.36□□□□□ -0.27
SCN8A-209ENST00000627620 PRG3Q9Y2Y8 225 aaPredicted RBP13.36□□□□□ -0.27
SCN8A-209ENST00000627620 PCDHB7Q9Y5E2 793 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 C17orf102A2RUQ5 167 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 EIF3HO15372 352 aaKnown RBP eCLIP13.36□□□□□ -0.27
SCN8A-209ENST00000627620 CELF2O95319 508 aaKnown RBP13.36□□□□□ -0.27
SCN8A-209ENST00000627620 ALDH1A3P47895 512 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 CNGA3Q16281 694 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 NAPEPLDQ6IQ20 393 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 IFNEQ86WN2 208 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 RIN2Q8WYP3 895 aaPredicted RBP13.36□□□□□ -0.27
SCN8A-209ENST00000627620 THAP2Q9H0W7 228 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 AKAP10O43572 662 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 DMC1Q14565 340 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 ICE2Q659A1 982 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 C4orf22Q6V702 233 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 GRID1Q9ULK0 1009 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 SETBP1Q9Y6X0 1596 aa13.36□□□□□ -0.27
SCN8A-209ENST00000627620 SRP72O76094 671 aaKnown RBP13.35□□□□□ -0.27
SCN8A-209ENST00000627620 PLA2G4AP47712 749 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 LVRNQ6Q4G3 990 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 PRUNE1Q86TP1 453 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 ZNF669Q96BR6 464 aaPredicted RBP13.35□□□□□ -0.27
SCN8A-209ENST00000627620 LBHD1Q9BQE6 289 aaPredicted RBP13.35□□□□□ -0.27
SCN8A-209ENST00000627620 FAM32AQ9Y421 112 aaKnown RBP13.35□□□□□ -0.27
SCN8A-209ENST00000627620 GAS2O43903 313 aaKnown RBP13.35□□□□□ -0.27
SCN8A-209ENST00000627620 EPHB2P29323 1055 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 MAP3K10Q02779 954 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 AMHR2Q16671 573 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 BOLA3Q53S33 107 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 ZRANB3Q5FWF4 1079 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 CYFIP2Q96F07 1278 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 TMEM161AQ9NX61 479 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 ABI2Q9NYB9 513 aaPredicted RBP13.35□□□□□ -0.27
SCN8A-209ENST00000627620 GTF3C4Q9UKN8 822 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 TFR2Q9UP52 801 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 ADGRA2Q96PE1 1338 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 CFAP99D6REC4 459 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 CHRM3P20309 590 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 WASHC5Q12768 1159 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 PTK6Q13882 451 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 GLRA4Q5JXX5 417 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 C16orf89Q6UX73 402 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 PCYOX1LQ8NBM8 494 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 ERP27Q96DN0 273 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 KCNK16Q96T55 309 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 YIPF2Q9BWQ6 316 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 APOL5Q9BWW9 433 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.35□□□□□ -0.27
SCN8A-209ENST00000627620 AIM2O14862 343 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 KLHL2O95198 593 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 CAP2P40123 477 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 MTFR1Q15390 333 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 HS6ST3Q8IZP7 471 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 ZNF555Q8NEP9 628 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 ACER1Q8TDN7 264 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 TFB1MQ8WVM0 346 aaKnown RBP13.35□□□□□ -0.27
SCN8A-209ENST00000627620 ZIM3Q96PE6 472 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 SLC39A10Q9ULF5 831 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 ODC1P11926 461 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 CCDC85BQ15834 202 aaPredicted RBP13.35□□□□□ -0.27
SCN8A-209ENST00000627620 MROH9Q5TGP6 573 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms