RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 ATP2B1P20020 1258 aa15.16■□□□□ 0.02
SNX1-214ENST00000625244 P2RY2P41231 377 aa15.16■□□□□ 0.02
SNX1-214ENST00000625244 SEC13P55735 322 aa15.16■□□□□ 0.02
SNX1-214ENST00000625244 CCT2P78371 535 aaKnown RBP15.16■□□□□ 0.02
SNX1-214ENST00000625244 LYSMD4Q5XG99 296 aa15.16■□□□□ 0.02
SNX1-214ENST00000625244 ZNF605Q86T29 641 aa15.16■□□□□ 0.02
SNX1-214ENST00000625244 ITIH5Q86UX2 942 aa15.16■□□□□ 0.02
SNX1-214ENST00000625244 MCPH1Q8NEM0 835 aa15.16■□□□□ 0.02
SNX1-214ENST00000625244 DEPTORQ8TB45 409 aa15.16■□□□□ 0.02
SNX1-214ENST00000625244 USP33Q8TEY7 942 aa15.16■□□□□ 0.02
SNX1-214ENST00000625244 AIFM3Q96NN9 605 aa15.16■□□□□ 0.02
SNX1-214ENST00000625244 CCDC94Q9BW85 323 aaPredicted RBP15.16■□□□□ 0.02
SNX1-214ENST00000625244 ECT2Q9H8V3 914 aa15.16■□□□□ 0.02
SNX1-214ENST00000625244 TOPORSQ9NS56 1045 aaPredicted RBP15.16■□□□□ 0.02
SNX1-214ENST00000625244 MYO16Q9Y6X6 1858 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 A0A087WV48 116 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 M0QZQ0 153 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 CDC25CP30307 473 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 GFPT1Q06210 699 aaPredicted RBP15.15■□□□□ 0.02
SNX1-214ENST00000625244 PDGFRLQ15198 375 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 CRY1Q16526 586 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 DUOXA1Q1HG43 343 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 C2orf27AQ580R0 203 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 GALNT17Q6IS24 598 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 CC2D1AQ6P1N0 951 aaPredicted RBP15.15■□□□□ 0.02
SNX1-214ENST00000625244 TMEM92Q6UXU6 159 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 SLCO6A1Q86UG4 719 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 LURAP1LQ8IV03 231 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 SLFN12Q8IYM2 578 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 CCDC33Q8N5R6 958 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 MAB21L3Q8N8X9 362 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 EXOC4Q96A65 974 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 CDT1Q9H211 546 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 CAPN10Q9HC96 672 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 DKK4Q9UBT3 224 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 KCNJ14Q9UNX9 436 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 KIAA1549LQ6ZVL6 1849 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 SHROOM3Q8TF72 1996 aa15.15■□□□□ 0.02
SNX1-214ENST00000625244 PTPRDP23468 1912 aa15.14■□□□□ 0.01
SNX1-214ENST00000625244 OR6C75A6NL08 312 aa15.14■□□□□ 0.01
SNX1-214ENST00000625244 ATXN7O15265 892 aaPredicted RBP15.14■□□□□ 0.01
SNX1-214ENST00000625244 LARGE1O95461 756 aa15.14■□□□□ 0.01
SNX1-214ENST00000625244 SERPINF2P08697 491 aa15.14■□□□□ 0.01
SNX1-214ENST00000625244 HMGB1P09429 215 aaKnown RBP15.14■□□□□ 0.01
SNX1-214ENST00000625244 XRCC6P12956 609 aaKnown RBP eCLIP15.14■□□□□ 0.01
SNX1-214ENST00000625244 AVPR1AP37288 418 aa15.14■□□□□ 0.01
SNX1-214ENST00000625244 NAMPTP43490 491 aa15.14■□□□□ 0.01
SNX1-214ENST00000625244 CDR1P51861 262 aa15.14■□□□□ 0.01
SNX1-214ENST00000625244 CYP4F3Q08477 520 aa15.14■□□□□ 0.01
SNX1-214ENST00000625244 BFSP1Q12934 665 aa15.14■□□□□ 0.01
SNX1-214ENST00000625244 CENPQQ7L2Z9 268 aaPredicted RBP15.14■□□□□ 0.01
SNX1-214ENST00000625244 TMEM150AQ86TG1 271 aa15.14■□□□□ 0.01
SNX1-214ENST00000625244 ZNF843Q8N446 348 aa15.14■□□□□ 0.01
SNX1-214ENST00000625244 GCNAQ96QF7 691 aa15.14■□□□□ 0.01
SNX1-214ENST00000625244 OXCT2Q9BYC2 517 aaPredicted RBP15.14■□□□□ 0.01
SNX1-214ENST00000625244 POLD4Q9HCU8 107 aa15.14■□□□□ 0.01
SNX1-214ENST00000625244 TDP1Q9NUW8 608 aa15.14■□□□□ 0.01
SNX1-214ENST00000625244 DNAAF2Q9NVR5 837 aaKnown RBP15.14■□□□□ 0.01
SNX1-214ENST00000625244 CNTN3Q9P232 1028 aa15.14■□□□□ 0.01
SNX1-214ENST00000625244 TUBGCP4Q9UGJ1 667 aa15.14■□□□□ 0.01
SNX1-214ENST00000625244 MMP17Q9ULZ9 603 aa15.14■□□□□ 0.01
SNX1-214ENST00000625244 TNFSF13BQ9Y275 285 aa15.14■□□□□ 0.01
SNX1-214ENST00000625244 PCDHB9Q9Y5E1 797 aa15.14■□□□□ 0.01
SNX1-214ENST00000625244 PCDH15Q96QU1 1955 aa15.13■□□□□ 0.01
SNX1-214ENST00000625244 K7EQS6 105 aa15.13■□□□□ 0.01
SNX1-214ENST00000625244 BAG4O95429 457 aaKnown RBP15.13■□□□□ 0.01
SNX1-214ENST00000625244 ATF6P18850 670 aa15.13■□□□□ 0.01
SNX1-214ENST00000625244 NMT1P30419 496 aaKnown RBP15.13■□□□□ 0.01
SNX1-214ENST00000625244 HOXD12P35452 270 aa15.13■□□□□ 0.01
SNX1-214ENST00000625244 DPP6P42658 865 aa15.13■□□□□ 0.01
SNX1-214ENST00000625244 SSRP1Q08945 709 aaKnown RBP15.13■□□□□ 0.01
SNX1-214ENST00000625244 KRT32Q14532 448 aa15.13■□□□□ 0.01
SNX1-214ENST00000625244 MAP7D1Q3KQU3 841 aa15.13■□□□□ 0.01
SNX1-214ENST00000625244 TOGARAM2Q6ZUX3 1019 aa15.13■□□□□ 0.01
SNX1-214ENST00000625244 APBB1IPQ7Z5R6 666 aaPredicted RBP15.13■□□□□ 0.01
SNX1-214ENST00000625244 MARCH9Q86YJ5 346 aa15.13■□□□□ 0.01
SNX1-214ENST00000625244 TRIM22Q8IYM9 498 aa15.13■□□□□ 0.01
SNX1-214ENST00000625244 CPA6Q8N4T0 437 aa15.13■□□□□ 0.01
SNX1-214ENST00000625244 CEP76Q8TAP6 659 aa15.13■□□□□ 0.01
SNX1-214ENST00000625244 SPACA7Q96KW9 195 aa15.13■□□□□ 0.01
SNX1-214ENST00000625244 PTPRHQ9HD43 1115 aa15.13■□□□□ 0.01
SNX1-214ENST00000625244 POLMQ9NP87 494 aaPredicted RBP15.13■□□□□ 0.01
SNX1-214ENST00000625244 GOLGA4Q13439 2230 aaKnown RBP15.12■□□□□ 0.01
SNX1-214ENST00000625244 ARHGAP33O14559 1287 aa15.12■□□□□ 0.01
SNX1-214ENST00000625244 GJB3O75712 270 aa15.12■□□□□ 0.01
SNX1-214ENST00000625244 ALDH1A2O94788 518 aa15.12■□□□□ 0.01
SNX1-214ENST00000625244 PDIA3P30101 505 aaKnown RBP15.12■□□□□ 0.01
SNX1-214ENST00000625244 EFNA5P52803 228 aa15.12■□□□□ 0.01
SNX1-214ENST00000625244 MYBPC2Q14324 1141 aa15.12■□□□□ 0.01
SNX1-214ENST00000625244 ZNF568Q3ZCX4 644 aa15.12■□□□□ 0.01
SNX1-214ENST00000625244 EARS2Q5JPH6 523 aaKnown RBP15.12■□□□□ 0.01
SNX1-214ENST00000625244 SPDYCQ5MJ68 293 aa15.12■□□□□ 0.01
SNX1-214ENST00000625244 TXNDC8Q6A555 127 aa15.12■□□□□ 0.01
SNX1-214ENST00000625244 PIK3AP1Q6ZUJ8 805 aa15.12■□□□□ 0.01
SNX1-214ENST00000625244 USP37Q86T82 979 aa15.12■□□□□ 0.01
SNX1-214ENST00000625244 SCUBE3Q8IX30 993 aa15.12■□□□□ 0.01
SNX1-214ENST00000625244 DEFB119Q8N690 84 aa15.12■□□□□ 0.01
SNX1-214ENST00000625244 WHAMMQ8TF30 809 aa15.12■□□□□ 0.01
SNX1-214ENST00000625244 GIPC2Q8TF65 315 aa15.12■□□□□ 0.01
SNX1-214ENST00000625244 ACAP3Q96P50 834 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms