RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 FIS1Q9Y3D6 152 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 PDHA1P08559 390 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 MDH1BQ5I0G3 518 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.48□□□□□ -0.25
MSH6-215ENST00000622629 ARMCX2Q7L311 632 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 CHST13Q8NET6 341 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 C10orf88Q9H8K7 445 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 NOD2Q9HC29 1040 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 DNPEPQ9ULA0 475 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 NUP188Q5SRE5 1749 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 APOL1O14791 398 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 AP1B1Q10567 949 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 ASPHQ12797 758 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 NME3Q13232 169 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 PTK7Q13308 1070 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 BEST2Q8NFU1 509 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 TUBB6Q9BUF5 446 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 VCX3BQ9H321 246 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 SIX2Q9NPC8 291 aa13.48□□□□□ -0.25
MSH6-215ENST00000622629 WRAP73Q9P2S5 460 aaPredicted RBP13.48□□□□□ -0.25
MSH6-215ENST00000622629 F8VP50 259 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 NPM3O75607 178 aaKnown RBP13.47□□□□□ -0.25
MSH6-215ENST00000622629 CDH8P55286 799 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 ZNF200P98182 395 aaPredicted RBP13.47□□□□□ -0.25
MSH6-215ENST00000622629 SPOCD1Q6ZMY3 1216 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 DCLK2Q8N568 766 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 UPF1Q92900 1129 aaKnown RBP eCLIP13.47□□□□□ -0.25
MSH6-215ENST00000622629 HPDLQ96IR7 371 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 GBP5Q96PP8 586 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 TSSK1BQ9BXA7 367 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 COL20A1Q9P218 1284 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 TLK1Q9UKI8 766 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 YDJCA8MPS7 323 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 OPHN1O60890 802 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 HUS1O60921 280 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 RBP5P82980 135 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 ANKRD20A8PQ5CZ79 823 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 TWF2Q6IBS0 349 aaKnown RBP13.47□□□□□ -0.25
MSH6-215ENST00000622629 AGAP3Q96P47 875 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 SMYD3Q9H7B4 428 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 NINJ2Q9NZG7 142 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 CRCPO75575 148 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 PECAM1P16284 738 aaPredicted RBP13.47□□□□□ -0.25
MSH6-215ENST00000622629 TARSP26639 723 aaKnown RBP13.47□□□□□ -0.25
MSH6-215ENST00000622629 JAM2P57087 298 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 COPS2P61201 443 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 MRPS9P82933 396 aaKnown RBP13.47□□□□□ -0.25
MSH6-215ENST00000622629 PPIL6Q8IXY8 311 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 TRAPPC12Q8WVT3 735 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 FAM161BQ96MY7 647 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 SAE1Q9UBE0 346 aaPredicted RBP13.47□□□□□ -0.25
MSH6-215ENST00000622629 PHTF1Q9UMS5 762 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 SYNPO2Q9UMS6 1093 aa13.47□□□□□ -0.25
MSH6-215ENST00000622629 NHSL1Q5SYE7 1610 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 DDX3YO15523 660 aaKnown RBP13.46□□□□□ -0.25
MSH6-215ENST00000622629 CA8P35219 290 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 JAG1P78504 1218 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 C9orf131Q5VYM1 1079 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 NLGN2Q8NFZ4 835 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 PIK3R5Q8WYR1 880 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 PCYOX1Q9UHG3 505 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 PIAS1O75925 651 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 CCNE2O96020 404 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 DSG3P32926 999 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 EPHB1P54762 984 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 AUHQ13825 339 aaKnown RBP13.46□□□□□ -0.25
MSH6-215ENST00000622629 TAF12Q16514 161 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 LY6KQ17RY6 165 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 BZW1Q7L1Q6 419 aaKnown RBP13.46□□□□□ -0.25
MSH6-215ENST00000622629 RASGEF1CQ8N431 466 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 FBXO36Q8NEA4 188 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.46□□□□□ -0.25
MSH6-215ENST00000622629 AGR3Q8TD06 166 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 DTX3LQ8TDB6 740 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 NSMCE1Q8WV22 266 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 NT5C1AQ9BXI3 368 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 NACA2Q9H009 215 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 RSAD1Q9HA92 442 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 GPATCH2LQ9NWQ4 482 aa13.46□□□□□ -0.25
MSH6-215ENST00000622629 CXCL8P10145 99 aa13.46□□□□□ -0.26
MSH6-215ENST00000622629 RPS12P25398 132 aaKnown RBP13.46□□□□□ -0.26
MSH6-215ENST00000622629 GEMIN4P57678 1058 aaKnown RBP13.46□□□□□ -0.26
MSH6-215ENST00000622629 KDSRQ06136 332 aa13.46□□□□□ -0.26
MSH6-215ENST00000622629 C1QBPQ07021 282 aaKnown RBP13.46□□□□□ -0.26
MSH6-215ENST00000622629 RWDD4Q6NW29 188 aaKnown RBP13.46□□□□□ -0.26
MSH6-215ENST00000622629 PID1Q7Z2X4 250 aa13.46□□□□□ -0.26
MSH6-215ENST00000622629 GABPB2Q8TAK5 448 aaPredicted RBP13.46□□□□□ -0.26
MSH6-215ENST00000622629 MBOAT7Q96N66 472 aa13.46□□□□□ -0.26
MSH6-215ENST00000622629 DDNO94850 711 aaPredicted RBP13.45□□□□□ -0.26
MSH6-215ENST00000622629 SSTR1P30872 391 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 AMHR2Q16671 573 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 FKBP1CQ5VVH2 108 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 DSTYKQ6XUX3 929 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 UBXN6Q9BZV1 441 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 AP5M1Q9H0R1 490 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 NUP98P52948 1817 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 CFLARO15519 480 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 SKIP12755 728 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 CHKAP35790 457 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 QPCTQ16769 361 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms