RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 SHC4Q6S5L8 630 aa25.85■■□□□ 1.73
ATXN3-253ENST00000621269 FOXD4L3Q6VB84 417 aaPredicted RBP25.85■■□□□ 1.73
ATXN3-253ENST00000621269 GAREM2Q75VX8 874 aa25.85■■□□□ 1.73
ATXN3-253ENST00000621269 ARID3BQ8IVW6 561 aaPredicted RBP25.85■■□□□ 1.73
ATXN3-253ENST00000621269 LRRC52Q8N7C0 313 aa25.85■■□□□ 1.73
ATXN3-253ENST00000621269 HPS3Q969F9 1004 aa25.85■■□□□ 1.73
ATXN3-253ENST00000621269 GCNAQ96QF7 691 aa25.85■■□□□ 1.73
ATXN3-253ENST00000621269 PCDHB5Q9Y5E4 795 aa25.85■■□□□ 1.73
ATXN3-253ENST00000621269 HAPLN1P10915 354 aaPredicted RBP25.84■■□□□ 1.73
ATXN3-253ENST00000621269 ATF6P18850 670 aa25.84■■□□□ 1.73
ATXN3-253ENST00000621269 MAML2Q8IZL2 1156 aaPredicted RBP25.84■■□□□ 1.73
ATXN3-253ENST00000621269 PDCL2Q8N4E4 241 aa25.84■■□□□ 1.73
ATXN3-253ENST00000621269 CSGALNACT1Q8TDX6 532 aa25.84■■□□□ 1.73
ATXN3-253ENST00000621269 GIPC2Q8TF65 315 aa25.84■■□□□ 1.73
ATXN3-253ENST00000621269 FBXO4Q9UKT5 387 aa25.84■■□□□ 1.73
ATXN3-253ENST00000621269 NDRG2Q9UN36 371 aaKnown RBP25.84■■□□□ 1.73
ATXN3-253ENST00000621269 PIAS3Q9Y6X2 628 aa25.84■■□□□ 1.73
ATXN3-253ENST00000621269 MIA3Q5JRA6 1907 aa25.83■■□□□ 1.73
ATXN3-253ENST00000621269 ZNF233A6NK53 670 aa25.83■■□□□ 1.73
ATXN3-253ENST00000621269 CDC25CP30307 473 aa25.83■■□□□ 1.73
ATXN3-253ENST00000621269 NFE2Q16621 373 aaPredicted RBP25.83■■□□□ 1.73
ATXN3-253ENST00000621269 ZNF528Q3MIS6 628 aa25.83■■□□□ 1.73
ATXN3-253ENST00000621269 GPIHBP1Q8IV16 184 aa25.83■■□□□ 1.73
ATXN3-253ENST00000621269 TMEM86AQ8N2M4 240 aa25.83■■□□□ 1.73
ATXN3-253ENST00000621269 GLIS3Q8NEA6 775 aa25.83■■□□□ 1.73
ATXN3-253ENST00000621269 FAM3CQ92520 227 aa25.83■■□□□ 1.73
ATXN3-253ENST00000621269 ANKRD36BP1Q96IX9 119 aa25.83■■□□□ 1.73
ATXN3-253ENST00000621269 MTMR12Q9C0I1 747 aa25.83■■□□□ 1.73
ATXN3-253ENST00000621269 DDX43Q9NXZ2 648 aaKnown RBP25.83■■□□□ 1.73
ATXN3-253ENST00000621269 L1RE1Q9UN81 338 aa25.83■■□□□ 1.73
ATXN3-253ENST00000621269 SCN1AP35498 2009 aa25.82■■□□□ 1.72
ATXN3-253ENST00000621269 CHADO15335 359 aa25.82■■□□□ 1.72
ATXN3-253ENST00000621269 F13A1P00488 732 aa25.82■■□□□ 1.72
ATXN3-253ENST00000621269 ME1P48163 572 aa25.82■■□□□ 1.72
ATXN3-253ENST00000621269 MYL7Q01449 175 aa25.82■■□□□ 1.72
ATXN3-253ENST00000621269 CSTF1Q05048 431 aaKnown RBP25.82■■□□□ 1.72
ATXN3-253ENST00000621269 SURF1Q15526 300 aa25.82■■□□□ 1.72
ATXN3-253ENST00000621269 RSPRY1Q96DX4 576 aa25.82■■□□□ 1.72
ATXN3-253ENST00000621269 ACBD6Q9BR61 282 aa25.82■■□□□ 1.72
ATXN3-253ENST00000621269 TASP1Q9H6P5 420 aa25.82■■□□□ 1.72
ATXN3-253ENST00000621269 MAGEF1Q9HAY2 307 aa25.82■■□□□ 1.72
ATXN3-253ENST00000621269 KIAA1586Q9HCI6 787 aa25.82■■□□□ 1.72
ATXN3-253ENST00000621269 GDAP2Q9NXN4 497 aa25.82■■□□□ 1.72
ATXN3-253ENST00000621269 FAM13BQ9NYF5 915 aa25.82■■□□□ 1.72
ATXN3-253ENST00000621269 SNX9Q9Y5X1 595 aa25.82■■□□□ 1.72
ATXN3-253ENST00000621269 NCANO14594 1321 aa25.82■■□□□ 1.72
ATXN3-253ENST00000621269 VPS13AQ96RL7 3174 aa25.81■■□□□ 1.72
ATXN3-253ENST00000621269 SHISA7A6NL88 538 aa25.81■■□□□ 1.72
ATXN3-253ENST00000621269 EIF3DO15371 548 aaKnown RBP eCLIP25.81■■□□□ 1.72
ATXN3-253ENST00000621269 POLR2DO15514 142 aaKnown RBP25.81■■□□□ 1.72
ATXN3-253ENST00000621269 TNNC2P02585 160 aa25.81■■□□□ 1.72
ATXN3-253ENST00000621269 FCHO2Q0JRZ9 810 aa25.81■■□□□ 1.72
ATXN3-253ENST00000621269 MYO1EQ12965 1108 aa25.81■■□□□ 1.72
ATXN3-253ENST00000621269 CNNM4Q6P4Q7 775 aa25.81■■□□□ 1.72
ATXN3-253ENST00000621269 CXorf38Q8TB03 319 aa25.81■■□□□ 1.72
ATXN3-253ENST00000621269 FAM84AQ96KN4 292 aa25.81■■□□□ 1.72
ATXN3-253ENST00000621269 C7orf25Q9BPX7 421 aa25.81■■□□□ 1.72
ATXN3-253ENST00000621269 PI4K2AQ9BTU6 479 aa25.81■■□□□ 1.72
ATXN3-253ENST00000621269 MKNK1Q9BUB5 465 aa25.81■■□□□ 1.72
ATXN3-253ENST00000621269 INTS13Q9NVM9 706 aa25.81■■□□□ 1.72
ATXN3-253ENST00000621269 HSPBP1Q9NZL4 362 aa25.81■■□□□ 1.72
ATXN3-253ENST00000621269 PRPF40AO75400 957 aaKnown RBP25.8■■□□□ 1.72
ATXN3-253ENST00000621269 KPNA1P52294 538 aaPredicted RBP25.8■■□□□ 1.72
ATXN3-253ENST00000621269 MLLT6P55198 1093 aaPredicted RBP25.8■■□□□ 1.72
ATXN3-253ENST00000621269 CYP4F8P98187 520 aa25.8■■□□□ 1.72
ATXN3-253ENST00000621269 FZD5Q13467 585 aa25.8■■□□□ 1.72
ATXN3-253ENST00000621269 FAM26FQ5R3K3 315 aa25.8■■□□□ 1.72
ATXN3-253ENST00000621269 LMBRD2Q68DH5 695 aaPredicted RBP25.8■■□□□ 1.72
ATXN3-253ENST00000621269 ATL3Q6DD88 541 aa25.8■■□□□ 1.72
ATXN3-253ENST00000621269 CBWD2Q8IUF1 395 aa25.8■■□□□ 1.72
ATXN3-253ENST00000621269 TOP6BLQ8N6T0 577 aa25.8■■□□□ 1.72
ATXN3-253ENST00000621269 ZNF507Q8TCN5 953 aa25.8■■□□□ 1.72
ATXN3-253ENST00000621269 IL21Q9HBE4 155 aa25.8■■□□□ 1.72
ATXN3-253ENST00000621269 TMLHEQ9NVH6 421 aa25.8■■□□□ 1.72
ATXN3-253ENST00000621269 OBP2AQ9NY56 170 aa25.8■■□□□ 1.72
ATXN3-253ENST00000621269 SIX4Q9UIU6 781 aa25.8■■□□□ 1.72
ATXN3-253ENST00000621269 CFAP45Q9UL16 551 aa25.8■■□□□ 1.72
ATXN3-253ENST00000621269 TCHHQ07283 1943 aa25.8■■□□□ 1.72
ATXN3-253ENST00000621269 ARNTLO00327 626 aa25.79■■□□□ 1.72
ATXN3-253ENST00000621269 KINO60870 393 aaKnown RBP25.79■■□□□ 1.72
ATXN3-253ENST00000621269 HOXD13P35453 343 aa25.79■■□□□ 1.72
ATXN3-253ENST00000621269 LHX1P48742 406 aa25.79■■□□□ 1.72
ATXN3-253ENST00000621269 DUOXA2Q1HG44 320 aa25.79■■□□□ 1.72
ATXN3-253ENST00000621269 EPM2AIP1Q7L775 607 aaPredicted RBP25.79■■□□□ 1.72
ATXN3-253ENST00000621269 SPATA18Q8TC71 538 aa25.79■■□□□ 1.72
ATXN3-253ENST00000621269 LEO1Q8WVC0 666 aaPredicted RBP25.79■■□□□ 1.72
ATXN3-253ENST00000621269 MSANTD3Q96H12 275 aa25.79■■□□□ 1.72
ATXN3-253ENST00000621269 ZMYM5Q9UJ78 669 aa25.79■■□□□ 1.72
ATXN3-253ENST00000621269 PCDHA7Q9UN72 937 aa25.79■■□□□ 1.72
ATXN3-253ENST00000621269 DMDP11532 3685 aa25.78■■□□□ 1.72
ATXN3-253ENST00000621269 ACAT1P24752 427 aaKnown RBP25.78■■□□□ 1.72
ATXN3-253ENST00000621269 CCNE1P24864 410 aa25.78■■□□□ 1.72
ATXN3-253ENST00000621269 WEE1P30291 646 aa25.78■■□□□ 1.72
ATXN3-253ENST00000621269 MTAPQ13126 283 aa25.78■■□□□ 1.72
ATXN3-253ENST00000621269 ARHGAP29Q52LW3 1261 aa25.78■■□□□ 1.72
ATXN3-253ENST00000621269 INTS6LQ5JSJ4 861 aaKnown RBP25.78■■□□□ 1.72
ATXN3-253ENST00000621269 SCARA3Q6AZY7 606 aa25.78■■□□□ 1.72
ATXN3-253ENST00000621269 C1orf228Q6PIY5 440 aa25.78■■□□□ 1.72
ATXN3-253ENST00000621269 UNC13DQ70J99 1090 aa25.78■■□□□ 1.72
ATXN3-253ENST00000621269 ADGRF2Q8IZF7 708 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms